Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 6.4e-285 983.4 501 100.0
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 6.3e-216 754.2 510 73.5
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 2.2e-208 729.2 508 70.7
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 1.2e-185 653.7 511 64.8
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 6.2e-179 631.3 511 62.0
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 2.9e-176 622.5 510 62.5
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 7.1e-175 617.8 511 61.6
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 6.0e-174 614.8 511 61.1
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.0e-173 614.0 512 61.1
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 2.3e-173 612.8 525 60.8
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 3.0e-173 612.5 510 61.8
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 6.6e-173 611.3 512 60.2
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 1.5e-172 610.1 510 61.2
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 3.3e-172 609.0 512 62.1
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 1.8e-170 603.2 511 60.5
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 5.3e-170 601.7 511 60.7
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 6.9e-170 601.3 510 61.0
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 1.2e-169 600.5 511 61.3
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 1.5e-169 600.1 512 58.6
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 2.6e-169 599.4 549 57.9
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 4.5e-169 598.6 512 58.8
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 5.8e-169 598.2 512 58.8
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 1.3e-168 597.0 530 58.9
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 2.9e-168 595.9 512 60.2
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 4.9e-168 595.1 511 59.7
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 1.9e-167 593.2 512 60.4
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 7.1e-167 591.3 552 55.4
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 7.1e-167 591.3 513 58.5
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 7.9e-166 587.8 510 58.2
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 3.0e-165 585.9 515 58.3
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 3.0e-165 585.9 510 56.9
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 3.9e-165 585.5 512 57.2
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 6.7e-165 584.7 511 58.9
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 2.5e-164 582.8 516 59.3
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 4.3e-164 582.0 513 56.5
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 4.3e-164 582.0 512 59.8
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 7.4e-164 581.3 512 58.0
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.8e-163 579.3 511 59.3
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 4.8e-163 578.6 522 57.9
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 1.1e-162 577.4 511 56.6
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 3.1e-162 575.9 511 59.1
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 1.5e-161 573.5 516 57.0
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 7.6e-161 571.2 511 58.7
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 1.3e-160 570.5 511 56.2
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 4.9e-160 568.5 519 57.6
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 6.4e-160 568.2 512 59.0
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 6.4e-160 568.2 511 57.3
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 5.5e-159 565.1 511 56.9
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 1.2e-158 563.9 516 57.9
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 1.2e-158 563.9 512 58.8
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 7.9e-158 561.2 511 56.9
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 2.3e-157 559.7 514 57.8
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 5.1e-157 558.5 511 57.1
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 8.7e-157 557.8 513 56.5
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 1.9e-156 556.6 516 56.6
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 3.3e-156 555.8 553 53.9
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 4.3e-156 555.4 516 56.6
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 4.3e-156 555.4 518 56.6
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 5.6e-156 555.1 509 56.4
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 7.4e-156 554.7 514 56.4
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 9.6e-156 554.3 510 56.7
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 2.1e-155 553.1 510 55.3
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 3.7e-155 552.4 505 57.8
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 1.1e-154 550.8 514 57.0
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 2.4e-154 549.7 510 56.1
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 3.1e-154 549.3 511 56.0
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 5.3e-154 548.5 513 55.0
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 2.6e-153 546.2 437 63.8
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 3.4e-153 545.8 511 56.2
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 1.3e-152 543.9 485 58.8
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 1.7e-152 543.5 514 55.3
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.2e-152 543.1 514 57.4
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 3.8e-152 542.3 515 55.1
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 4.9e-152 542.0 517 55.5
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 4.9e-152 542.0 542 55.2
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 1.9e-151 540.0 500 57.0
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 4.2e-151 538.9 521 55.1
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 4.2e-151 538.9 422 72.5
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 1.6e-150 537.0 518 55.6
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 7.9e-150 534.6 460 59.3
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 7.9e-150 534.6 494 57.3
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 3.0e-149 532.7 511 55.0
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 3.0e-149 532.7 511 55.0
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 3.0e-149 532.7 458 61.8
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 1.9e-148 530.0 460 60.2
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 4.3e-148 528.9 513 54.2
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 2.4e-146 523.1 426 63.1
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 3.4e-145 519.2 585 49.7
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 1.0e-144 517.7 514 55.1
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 4.2e-143 512.3 515 50.5
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 1.1e-138 497.7 510 52.4
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 2.0e-137 493.4 592 48.3
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 5.9e-137 491.9 531 51.2
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 5.9e-137 491.9 533 49.7
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 2.6e-132 476.5 454 55.1
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 6.3e-123 445.3 510 48.0
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 4.5e-121 439.1 521 46.6
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 5.9e-121 438.7 468 49.6
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 2.2e-115 420.2 389 57.6
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 6.1e-110 402.1 527 43.1
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 2.3e-104 383.6 376 55.9
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 4.4e-100 369.4 533 40.5
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 5.4e-98 362.5 341 58.1
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 4.3e-95 352.8 369 54.2
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 4.6e-89 332.8 429 45.0
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 1.6e-86 324.3 415 45.5
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 2.1e-86 323.9 324 53.4
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 1.2e-81 308.1 452 42.5
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 6.6e-80 302.4 249 62.2
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 5.8e-76 289.3 344 47.1
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 1.3e-72 278.1 196 69.4
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 1.1e-71 275.0 325 49.2
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 1.2e-65 255.0 452 37.4
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 2.8e-54 217.2 357 37.5
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 1.8e-53 214.5 537 31.1
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 9.0e-53 212.2 382 36.6
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 4.3e-47 193.4 135 67.4
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 6.2e-46 189.5 181 53.6
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 2.5e-42 177.6 136 64.0
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.7e-41 174.1 130 66.9
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.7e-41 174.1 130 66.9
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 1.3e-27 128.6 488 26.8
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 9.4e-26 122.5 206 37.9
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 6.9e-21 106.3 60 80.0
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.9e-19 100.9 109 50.5
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 2.1e-17 94.7 48 85.4
C03p92170 Brassica napus HOM05D005843 ORTHO05D040940 3.6e-17 94.0 109 45.0
BolC3t21533H Brassica oleracea HOM05D005843 ORTHO05D040940 3.6e-17 94.0 109 45.0
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 1.0e-16 92.4 52 71.2
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 4.4e-15 87.0 220 34.5
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 2.4e-13 81.3 116 41.4
BraA10t45356Z Brassica rapa HOM05D005843 ORTHO05D007781 2.6e-12 77.8 74 54.1
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.8e-08 65.1 38 78.9
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 3.3e-07 60.8 142 35.2


User provided reference genes

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