Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 4.9e-202 707.6 364 100.0
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 5.2e-151 538.1 422 72.5
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 2.9e-101 372.9 431 52.0
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 6.9e-95 351.7 431 48.3
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 1.5e-81 307.4 432 45.1
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 5.7e-81 305.4 428 44.9
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 8.2e-80 301.6 428 44.4
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 2.4e-79 300.1 428 43.0
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 5.9e-78 295.4 428 44.6
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 1.0e-77 294.7 433 43.4
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 1.3e-77 294.3 428 43.0
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 2.2e-77 293.5 288 53.1
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 5.0e-77 292.4 426 43.4
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.1e-76 291.2 434 43.1
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 1.9e-76 290.4 427 43.8
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 2.5e-76 290.0 429 42.2
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 4.2e-76 289.3 422 42.7
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 5.5e-76 288.9 426 43.2
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 7.2e-76 288.5 282 55.7
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 9.4e-76 288.1 442 42.1
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 2.7e-75 286.6 427 42.9
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 1.0e-74 284.6 442 41.6
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 1.4e-74 284.3 428 41.4
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 1.8e-74 283.9 433 42.5
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 5.1e-74 282.3 427 39.8
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 7.4e-73 278.5 424 42.2
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 1.3e-72 277.7 427 43.1
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 2.8e-72 276.6 428 40.7
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 2.8e-72 276.6 287 52.6
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 2.4e-71 273.5 434 41.0
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 3.4e-70 269.6 429 41.3
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 5.9e-70 268.9 444 40.3
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 5.9e-70 268.9 427 40.0
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 1.3e-69 267.7 430 39.8
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 1.7e-69 267.3 432 41.4
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 5.0e-69 265.8 427 39.6
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 5.0e-69 265.8 428 41.4
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 8.5e-69 265.0 430 40.7
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 1.4e-68 264.2 290 49.7
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 1.4e-68 264.2 427 41.0
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 1.4e-68 264.2 427 41.0
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 1.4e-68 264.2 427 41.0
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 4.2e-68 262.7 429 40.1
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 4.2e-68 262.7 288 50.3
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 1.2e-67 261.2 433 40.4
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 1.6e-67 260.8 424 41.3
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 2.1e-67 260.4 429 38.2
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 2.7e-67 260.0 286 50.3
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 2.7e-67 260.0 431 40.6
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 3.6e-67 259.6 425 39.8
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 3.6e-67 259.6 428 40.4
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 3.6e-67 259.6 428 38.3
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 6.1e-67 258.8 420 41.2
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 1.0e-66 258.1 429 41.3
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.4e-66 257.7 433 40.4
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 2.3e-66 256.9 426 38.7
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 3.9e-66 256.1 430 39.8
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 3.9e-66 256.1 438 40.0
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 5.1e-66 255.8 427 40.5
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 5.1e-66 255.8 433 39.7
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 5.1e-66 255.8 433 37.6
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 6.7e-66 255.4 286 49.7
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 1.1e-65 254.6 428 40.2
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 1.5e-65 254.2 428 41.8
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 2.0e-65 253.8 428 39.3
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 2.6e-65 253.4 288 48.3
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 3.3e-65 253.1 425 40.0
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 4.4e-65 252.7 287 50.2
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 5.7e-65 252.3 426 39.2
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 5.7e-65 252.3 472 37.3
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 9.7e-65 251.5 435 40.7
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 4.8e-64 249.2 433 39.5
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 4.8e-64 249.2 290 47.6
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 1.1e-63 248.1 426 38.7
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 3.1e-63 246.5 425 38.1
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 3.1e-63 246.5 250 54.8
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 3.1e-63 246.5 428 37.6
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 4.1e-63 246.1 418 39.2
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 4.1e-63 246.1 427 38.4
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 7.0e-63 245.4 426 38.7
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 3.5e-62 243.0 431 38.7
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 7.7e-62 241.9 427 38.6
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 7.7e-62 241.9 432 40.0
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 1.0e-61 241.5 429 38.2
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 1.0e-61 241.5 429 38.2
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 2.9e-61 240.0 454 37.0
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 2.9e-61 240.0 423 38.3
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 1.1e-60 238.0 434 38.2
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 3.2e-60 236.5 429 37.5
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 7.2e-60 235.3 428 38.3
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 1.6e-59 234.2 439 36.4
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 3.0e-58 229.9 279 45.5
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 2.6e-57 226.9 288 45.1
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 7.4e-57 225.3 436 38.1
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 2.8e-56 223.4 325 42.8
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 2.8e-56 223.4 289 45.3
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 4.8e-56 222.6 464 36.9
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 3.6e-51 206.5 233 47.6
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 3.0e-50 203.4 454 35.7
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 3.0e-50 203.4 294 43.2
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 4.1e-47 193.0 426 34.0
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 7.0e-47 192.2 254 42.5
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 9.1e-47 191.8 288 40.3
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 7.7e-46 188.7 181 53.6
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 1.2e-43 181.4 393 35.1
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 4.0e-42 176.4 387 36.7
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 5.2e-42 176.0 299 36.5
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 5.7e-41 172.6 130 64.6
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 7.5e-41 172.2 384 35.7
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 1.2e-38 164.9 204 46.1
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 4.2e-36 156.4 423 32.2
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 4.2e-36 156.4 265 38.1
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 6.1e-35 152.5 372 34.7
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 1.6e-30 137.9 270 35.2
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 6.1e-27 125.9 264 34.8
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 2.1e-19 100.9 276 30.4
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 2.8e-19 100.5 101 51.5
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 1.5e-17 94.7 250 33.6
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 2.9e-16 90.5 213 34.7
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 1.4e-15 88.2 152 36.2
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 3.5e-14 83.6 67 65.7
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 3.5e-14 83.6 67 65.7
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 2.3e-13 80.9 116 41.4
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 1.9e-12 77.8 199 33.2
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 3.7e-08 63.5 133 36.8
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 6.4e-08 62.8 38 76.3


User provided reference genes

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