Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold75G24932 Striga asiatica HOM05D004206 ORTHO05D003325 1.1e-207 726.5 385 100.0
SGA_v2.0_scaffold126G33821 Striga asiatica HOM05D004206 ORTHO05D003325 2.7e-97 359.8 309 65.7
SalBow3G3817 Salvia bowleyana HOM05D004206 ORTHO05D003325 2.6e-52 210.3 306 43.1
Oeu026485.2 Olea europaea HOM05D004206 ORTHO05D003325 1.9e-47 194.1 384 39.1
Migut.J00362 Erythranthe guttata HOM05D004206 ORTHO05D003325 8.2e-46 188.7 319 46.4
MSTRG.19101 Avicennia marina HOM05D004206 ORTHO05D003325 1.4e-42 177.9 225 48.9
Oeu049209.1 Olea europaea HOM05D004206 ORTHO05D003325 1.0e-35 155.2 239 43.5
Cc06_g02970 Coffea canephora HOM05D004206 ORTHO05D003325 3.0e-32 143.7 323 35.9
Oeu036176.1 Olea europaea HOM05D004206 ORTHO05D003325 2.8e-30 137.1 273 37.7
SalBow4G2008 Salvia bowleyana HOM05D004206 ORTHO05D003325 1.1e-26 125.2 428 31.8
MSTRG.5685 Avicennia marina HOM05D004206 ORTHO05D003325 8.0e-25 119.0 137 54.7
Nitab4.5_0009149g0020 Nicotiana tabacum HOM05D004206 ORTHO05D003325 3.1e-21 107.1 227 43.6
Nitab4.5_0002077g0110 Nicotiana tabacum HOM05D004206 ORTHO05D003325 4.1e-21 106.7 265 37.7
Dinv35636 Davidia involucrata HOM05D004206 ORTHO05D003325 7.0e-21 105.9 280 33.6
Hma1.2p1_1065F.1_g253750 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 1.6e-20 104.8 213 35.7
Hma1.2p1_0350F.1_g132380 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 4.5e-20 103.2 213 35.2
Nitab4.5_0000349g0070 Nicotiana tabacum HOM05D004206 ORTHO05D003325 2.5e-18 97.4 276 32.2
DCAR_009254 Daucus carota HOM05D004206 ORTHO05D003325 9.4e-18 95.5 294 32.7
PGSC0003DMG400008929 Solanum tuberosum HOM05D004206 ORTHO05D003325 9.4e-18 95.5 139 48.2
Actinidia26442 Actinidia chinensis HOM05D004206 ORTHO05D003325 2.1e-17 94.4 215 34.0
CSS0004803 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 4.7e-17 93.2 309 30.7
Medtr7g099950 Medicago truncatula HOM05D004206 ORTHO05D003325 6.1e-17 92.8 302 33.1
CAN.G97.20 Capsicum annuum HOM05D004206 ORTHO05D003325 1.0e-16 92.0 276 35.9
Peaxi162Scf00039g01222 Petunia axillaris HOM05D004206 ORTHO05D003325 1.0e-16 92.0 277 31.4
Nitab4.5_0000527g0130 Nicotiana tabacum HOM05D004206 ORTHO05D003325 1.8e-16 91.3 269 30.9
Lj3C971T5 Lonicera japonica HOM05D004206 ORTHO05D003325 1.5e-15 88.2 292 31.2
Lsat_1_v5_gn_1_55680 Lactuca sativa HOM05D004206 ORTHO05D003325 2.0e-15 87.8 138 39.9
Hund00876 Selenicereus undatus HOM05D004206 ORTHO05D003325 2.0e-15 87.8 397 27.5
PGSC0003DMG401019213 Solanum tuberosum HOM05D004206 ORTHO05D003325 2.0e-15 87.8 275 34.5
unitig_578.g15702 Utricularia gibba HOM05D004206 ORTHO05D003325 3.3e-15 87.0 65 67.7
Sopen09g005150 Solanum pennellii HOM05D004206 ORTHO05D003325 5.7e-15 86.3 210 32.9
MSTRG.26756 Avicennia marina HOM05D004206 ORTHO05D003325 9.7e-15 85.5 128 43.0
VMungo1383G1995 Vigna mungo HOM05D004206 ORTHO05D003325 1.3e-14 85.1 304 30.9
Haze_20742 Corylus avellana HOM05D004206 ORTHO05D003325 1.7e-14 84.7 344 28.8
Sopen10g035740 Solanum pennellii HOM05D004206 ORTHO05D003325 2.2e-14 84.3 292 30.8
Solyc09g010410.3 Solanum lycopersicum HOM05D004206 ORTHO05D003325 4.8e-14 83.2 209 32.5
GSVIVG01025530001 Vitis vinifera HOM05D004206 ORTHO05D003325 1.1e-13 82.0 293 29.7
Peaxi162Scf00407g00067 Petunia axillaris HOM05D004206 ORTHO05D003325 1.4e-13 81.6 258 33.3
vmacro20128 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 1.8e-13 81.3 288 30.6
TAR633G1790 Trochodendron aralioides HOM05D004206 ORTHO05D003325 2.4e-13 80.9 279 30.1
Actinidia13126 Actinidia chinensis HOM05D004206 ORTHO05D003325 3.1e-13 80.5 294 30.3
FAN09G1551 Fragaria x ananassa HOM05D004206 ORTHO05D003325 3.1e-13 80.5 336 33.6
AUR62037393 Chenopodium quinoa HOM05D004206 ORTHO05D003325 4.1e-13 80.1 173 37.6
Thecc.05G044400 Theobroma cacao HOM05D004206 ORTHO05D003325 4.1e-13 80.1 233 33.0
TAR371G1160 Trochodendron aralioides HOM05D004206 ORTHO05D003325 4.1e-13 80.1 229 33.2
Hma1.2p1_1707F.1_g298550 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 5.3e-13 79.7 146 39.7
HanXRQChr07g0196151 Helianthus annuus HOM05D004206 ORTHO05D003325 2.0e-12 77.8 282 28.4
Gohir.A04G080300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 2.7e-12 77.4 151 39.7
EL10Ac9g20956 Beta vulgaris HOM05D004206 ORTHO05D003325 4.5e-12 76.6 242 30.6
arahy.Tifrunner.gnm1.ann1.72TEPU Arachis hypogaea HOM05D004206 ORTHO05D003325 7.7e-12 75.9 194 32.5
HanXRQChr14g0453751 Helianthus annuus HOM05D004206 ORTHO05D003325 7.7e-12 75.9 146 38.4
Rhsim05G0188200 Rhododendron simsii HOM05D004206 ORTHO05D003325 7.7e-12 75.9 277 31.0
Sc01g0003990 Simmondsia chinensis HOM05D004206 ORTHO05D003325 7.7e-12 75.9 124 38.7
MD12G1138400 Malus domestica HOM05D004206 ORTHO05D003325 1.0e-11 75.5 155 41.3
Duzib093G1984 Durio zibethinus HOM05D004206 ORTHO05D003325 1.3e-11 75.1 244 33.2
Solyc10g086360.2 Solanum lycopersicum HOM05D004206 ORTHO05D003325 1.3e-11 75.1 231 33.8
Sc20g0004600 Simmondsia chinensis HOM05D004206 ORTHO05D003325 2.2e-11 74.3 73 56.2
FAN05G4716 Fragaria x ananassa HOM05D004206 ORTHO05D003325 2.9e-11 73.9 263 34.2
Duzib128G2059 Durio zibethinus HOM05D004206 ORTHO05D003325 3.8e-11 73.6 249 32.5
Lsat_1_v5_gn_2_110540 Lactuca sativa HOM05D004206 ORTHO05D003325 3.8e-11 73.6 135 41.5
CANSAT35G0311 Cannabis sativa HOM05D004206 ORTHO05D003325 5.0e-11 73.2 140 38.6
FvH4_6g14310 Fragaria vesca HOM05D004206 ORTHO05D003325 5.0e-11 73.2 263 33.8
Hma1.2p1_1535F.1_g289470 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 5.0e-11 73.2 58 62.1
CSS0042901 Camellia sinensis var. sinensis HOM05D004206 ORTHO05D003325 6.5e-11 72.8 180 32.2
Lj2A99T58 Lonicera japonica HOM05D004206 ORTHO05D003325 6.5e-11 72.8 185 34.6
AUR62041741 Chenopodium quinoa HOM05D004206 ORTHO05D003325 1.1e-10 72.0 173 35.8
vmacro08670 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 1.5e-10 71.6 271 31.4
Aqoxy2G02033 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 1.9e-10 71.2 267 28.5
Atru.chr8.1956 Acer truncatum HOM05D004206 ORTHO05D003325 4.2e-10 70.1 140 38.6
ECA233G2126 Erigeron canadensis HOM05D004206 ORTHO05D003325 4.2e-10 70.1 248 27.4
MD04G1121200 Malus domestica HOM05D004206 ORTHO05D003325 5.5e-10 69.7 158 39.2
FAN02G2861 Fragaria x ananassa HOM05D004206 ORTHO05D003325 7.2e-10 69.3 251 33.5
Gohir.A09G158300 Gossypium hirsutum HOM05D004206 ORTHO05D003325 7.2e-10 69.3 266 29.3
MBI05_g10357_MAGBIO Magnolia biondii HOM05D004206 ORTHO05D003325 1.2e-09 68.6 321 28.0
VMungo0720G2610 Vigna mungo HOM05D004206 ORTHO05D003325 1.2e-09 68.6 82 52.4
Actinidia05297 Actinidia chinensis HOM05D004206 ORTHO05D003325 1.6e-09 68.2 188 32.4
Phvul.007G158100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 1.6e-09 68.2 76 55.3
Manes.08G076700 Manihot esculenta HOM05D004206 ORTHO05D003325 2.1e-09 67.8 162 34.6
Gohir.D04G119400 Gossypium hirsutum HOM05D004206 ORTHO05D003325 3.6e-09 67.0 151 37.1
Gorai.012G101500 Gossypium raimondii HOM05D004206 ORTHO05D003325 3.6e-09 67.0 151 37.1
Duzib106G1929 Durio zibethinus HOM05D004206 ORTHO05D003325 4.7e-09 66.6 135 40.0
Glyma.10G044400 Glycine max HOM05D004206 ORTHO05D003325 6.1e-09 66.2 157 35.7
Aqoxy4G02996 Aquilegia oxysepala HOM05D004206 ORTHO05D003325 1.0e-08 65.5 133 40.6
Ciclev10012502m.g Citrus clementina HOM05D004206 ORTHO05D003325 1.0e-08 65.5 122 38.5
ECA238G1623 Erigeron canadensis HOM05D000150 ORTHO05D000108 1.4e-08 65.1 306 26.5
vmacro03102 Vaccinium macrocarpon HOM05D004206 ORTHO05D003325 1.4e-08 65.1 69 56.5
Manes.09G086700 Manihot esculenta HOM05D004206 ORTHO05D003325 1.8e-08 64.7 83 45.8
PGR004G0289 Punica granatum HOM05D004206 ORTHO05D003325 1.8e-08 64.7 72 54.2
Gohir.D09G153700 Gossypium hirsutum HOM05D004206 ORTHO05D003325 2.3e-08 64.3 239 30.5
RcHm_v2.0_Chr3g0467301 Rosa chinensis HOM05D004206 ORTHO05D003325 2.3e-08 64.3 157 38.2
CDE09G0187 Ceratophyllum demersum HOM05D004206 ORTHO05D003325 3.0e-08 63.9 165 31.5
Hma1.2p1_1004F.1_g246870 Hydrangea macrophylla HOM05D004206 ORTHO05D003325 3.0e-08 63.9 45 66.7
Lj5g0023302 Lotus japonicus HOM05D004206 ORTHO05D003325 5.2e-08 63.2 121 38.8
PGR004G1990 Punica granatum HOM05D004206 ORTHO05D003325 5.2e-08 63.2 76 53.9
Cfa017429 Carpinus fangiana HOM05D004206 ORTHO05D003325 8.8e-08 62.4 174 31.6
Migut.M01027 Erythranthe guttata HOM05D004206 ORTHO05D003325 8.8e-08 62.4 73 49.3
Lj1g0028211 Lotus japonicus HOM05D004206 ORTHO05D003325 1.2e-07 62.0 193 32.1
Potri.006G082100 Populus trichocarpa HOM05D004206 ORTHO05D003325 1.2e-07 62.0 234 36.8
QL05p010542 Quercus lobata HOM05D004206 ORTHO05D003325 1.2e-07 62.0 57 56.1
QL07p047329 Quercus lobata HOM05D004206 ORTHO05D003325 1.2e-07 62.0 57 56.1
TPR.G21456 Trifolium pratense HOM05D004206 ORTHO05D003325 1.5e-07 61.6 201 32.3
Gorai.006G175200 Gossypium raimondii HOM05D004206 ORTHO05D003325 2.0e-07 61.2 265 28.7
Hund07780 Selenicereus undatus HOM05D004206 ORTHO05D003325 2.0e-07 61.2 72 54.2
PSO339G0439 Papaver somniferum HOM05D004206 ORTHO05D003325 2.6e-07 60.8 215 29.3
SalBow8G2190 Salvia bowleyana HOM05D004206 ORTHO05D003325 2.6e-07 60.8 65 49.2
CSS0031426 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D000289 3.4e-07 60.5 67 55.2
ClCG10G020930 Citrullus lanatus HOM05D004206 ORTHO05D003325 3.4e-07 60.5 160 32.5
Gorai.007G375400 Gossypium raimondii HOM05D004206 ORTHO05D003325 3.4e-07 60.5 246 37.8
PSO206G0053 Papaver somniferum HOM05D004206 ORTHO05D003325 3.4e-07 60.5 244 28.3
MELO3C009278.2 Cucumis melo HOM05D004206 ORTHO05D003325 4.4e-07 60.1 186 30.6
ECA248G2846 Erigeron canadensis HOM05D004206 ORTHO05D003325 4.4e-07 60.1 51 58.8
Gohir.A11G326100 Gossypium hirsutum HOM05D004206 ORTHO05D003325 4.4e-07 60.1 66 51.5
Ca_09615_v3 Cicer arietinum L. HOM05D004206 ORTHO05D003325 5.7e-07 59.7 77 51.9
SEGI_05191 Sequoiadendron giganteum HOM05D004206 ORTHO05D003325 5.7e-07 59.7 187 32.1
CiPaw.09G188800 Carya illinoinensis HOM05D004206 ORTHO05D003325 7.5e-07 59.3 278 27.3
CsaV3_3G035080 Cucumis sativus L. HOM05D004206 ORTHO05D003325 9.8e-07 58.9 186 30.6
Eucgr.K03159 Eucalyptus grandis HOM05D004206 ORTHO05D003325 9.8e-07 58.9 39 71.8
Gohir.D11G345000 Gossypium hirsutum HOM05D004206 ORTHO05D003325 9.8e-07 58.9 246 37.0
Prupe.6G250300 Prunus persica HOM05D004206 ORTHO05D003325 9.8e-07 58.9 89 44.9
TAR636G0761 Trochodendron aralioides HOM05D004206 ORTHO05D003325 9.8e-07 58.9 54 57.4
Phvul.001G170100 Phaseolus vulgaris HOM05D004206 ORTHO05D003325 1.3e-06 58.5 218 30.3
CiPaw.10G143300 Carya illinoinensis HOM05D004206 ORTHO05D003325 1.7e-06 58.2 176 33.5
Lalb_Chr02g0153081 Lupinus albus HOM05D004206 ORTHO05D003325 1.7e-06 58.2 78 51.3
Actinidia07050 Actinidia chinensis HOM05D004206 ORTHO05D003325 2.2e-06 57.8 68 48.5
CDE02G3836 Ceratophyllum demersum HOM05D004206 ORTHO05D003325 2.2e-06 57.8 211 29.9
Glyma.03G172400 Glycine max HOM05D004206 ORTHO05D003325 2.2e-06 57.8 237 29.5
Lsat_1_v5_gn_1_55700 Lactuca sativa HOM05D004206 ORTHO05D003325 2.2e-06 57.8 70 48.6
PGR004G2702 Punica granatum HOM05D004206 ORTHO05D003325 2.2e-06 57.8 64 53.1
TWI74G0821 Tripterygium wilfordii HOM05D004206 ORTHO05D003325 2.8e-06 57.4 80 50.0
Psat6g067720 Pisum sativum HOM05D004206 ORTHO05D003325 4.8e-06 56.6 46 65.2
TPR.G25989 Trifolium pratense HOM05D004206 ORTHO05D003325 4.8e-06 56.6 63 47.6
ATR0559G289 Amborella trichopoda HOM05D004206 ORTHO05D003325 6.3e-06 56.2 131 35.1
COL.COLO4_14855 Corchorus olitorius HOM05D004206 ORTHO05D003325 6.3e-06 56.2 65 50.8
HanXRQChr14g0459281 Helianthus annuus HOM05D004206 ORTHO05D003325 6.3e-06 56.2 49 53.1
Lalb_Chr06g0171041 Lupinus albus HOM05D004206 ORTHO05D003325 6.3e-06 56.2 184 31.0
Lalb_Chr25g0289551 Lupinus albus HOM05D004206 ORTHO05D003325 6.3e-06 56.2 49 57.1
Aa31LG5G22930 Aethionema arabicum HOM05D008508 ORTHO05D003325 8.3e-06 55.8 69 46.4
Glyma.19G173300 Glycine max HOM05D004206 ORTHO05D003325 8.3e-06 55.8 213 31.9


User provided reference genes

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