Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 4.6e-149 531.2 265 100.0
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 1.6e-96 356.7 265 70.9
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 1.2e-93 347.1 266 69.9
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 4.0e-92 342.0 266 71.4
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 6.8e-92 341.3 272 69.5
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 2.0e-91 339.7 271 70.1
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 5.7e-91 338.2 270 70.0
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 7.5e-91 337.8 269 70.6
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 9.8e-91 337.4 270 69.3
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 1.3e-90 337.0 286 66.8
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 6.3e-90 334.7 266 68.4
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 1.1e-89 334.0 182 88.5
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 1.4e-89 333.6 271 69.0
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 5.4e-89 331.6 271 68.6
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 1.2e-88 330.5 219 76.3
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 1.6e-88 330.1 178 89.3
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 1.6e-88 330.1 178 89.3
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 2.7e-88 329.3 270 68.5
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 7.8e-88 327.8 178 89.9
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 1.7e-87 326.6 190 83.7
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 6.6e-87 324.7 178 87.6
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 1.5e-86 323.6 258 66.3
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 1.9e-86 323.2 197 80.7
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 4.3e-86 322.0 271 66.4
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 5.6e-86 321.6 254 68.5
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 1.2e-85 320.5 195 81.5
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 1.2e-85 320.5 247 70.0
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 2.1e-85 319.7 265 67.5
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 2.8e-85 319.3 265 67.5
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 2.8e-85 319.3 271 66.4
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 3.1e-84 315.8 192 81.8
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 3.1e-84 315.8 192 81.8
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 3.1e-84 315.8 209 75.6
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 3.1e-84 315.8 245 69.4
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 3.1e-84 315.8 263 67.7
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 6.8e-84 314.7 178 86.5
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 2.0e-83 313.2 197 79.7
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 2.6e-83 312.8 215 73.0
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 2.6e-83 312.8 285 63.5
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 3.4e-83 312.4 177 85.3
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 4.4e-83 312.0 188 81.4
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 9.8e-83 310.8 179 83.2
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 9.8e-83 310.8 198 76.8
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 6.4e-82 308.1 189 80.4
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 3.2e-81 305.8 197 76.6
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 5.4e-81 305.1 254 65.0
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 7.0e-81 304.7 252 66.7
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 9.2e-81 304.3 268 64.6
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 9.2e-81 304.3 194 79.4
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 1.2e-80 303.9 180 83.9
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 1.6e-80 303.5 265 61.9
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 2.7e-80 302.8 265 64.5
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 4.6e-80 302.0 178 84.3
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 6.0e-80 301.6 179 83.8
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 7.8e-80 301.2 180 82.2
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 1.0e-79 300.8 264 64.0
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 1.0e-79 300.8 177 80.2
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 1.3e-79 300.4 262 62.2
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 2.3e-79 299.7 253 64.0
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 3.0e-79 299.3 260 62.7
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 3.0e-79 299.3 183 78.7
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 6.6e-79 298.1 179 82.1
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 8.6e-79 297.7 256 62.9
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 8.6e-79 297.7 179 82.1
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 1.1e-78 297.4 265 62.6
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 1.5e-78 297.0 268 61.9
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 1.5e-78 297.0 178 82.6
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 2.5e-78 296.2 242 65.3
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 3.3e-78 295.8 237 65.4
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 7.3e-78 294.7 187 77.5
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 5.2e-76 288.5 213 70.9
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 3.4e-75 285.8 200 73.0
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 9.8e-75 284.3 256 61.3
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 6.4e-74 281.6 270 61.9
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 1.6e-72 276.9 194 72.2
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 1.7e-71 273.5 256 58.6
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 3.9e-71 272.3 178 77.0
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 1.5e-70 270.4 178 71.3
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 2.5e-70 269.6 199 71.4
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 5.6e-70 268.5 272 57.7
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 3.6e-69 265.8 232 62.1
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 6.2e-69 265.0 273 58.2
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 2.3e-68 263.1 197 68.0
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 8.9e-68 261.2 235 62.1
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 1.7e-66 256.9 185 66.5
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 2.4e-65 253.1 178 68.5
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 6.0e-64 248.4 208 64.4
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 1.9e-57 226.9 122 91.8
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 7.1e-57 224.9 187 63.1
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 1.2e-56 224.2 169 68.6
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 4.3e-54 215.7 134 80.6
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 1.1e-49 201.1 204 55.4
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 4.5e-43 179.1 166 55.4
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 9.9e-43 177.9 175 53.1
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 1.7e-42 177.2 178 57.3
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 7.9e-40 168.3 94 85.1
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 4.9e-34 149.1 129 64.3
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 4.8e-29 132.5 75 84.0
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 1.2e-24 117.9 64 84.4
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 3.4e-19 99.8 58 86.2
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 6.9e-12 75.5 53 67.9


User provided reference genes

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