Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold75G24836 Striga asiatica HOM05D004255 ORTHO05D004815 2.9e-109 400.2 204 100.0
Migut.J00519 Erythranthe guttata HOM05D004255 ORTHO05D004815 4.6e-54 216.9 201 54.2
SalBow2G0603 Salvia bowleyana HOM05D004255 ORTHO05D004815 2.7e-46 191.0 203 53.7
SalBow2G0953 Salvia bowleyana HOM05D004255 ORTHO05D004815 2.7e-46 191.0 203 53.7
CSS0008426 Camellia sinensis var. sinensis HOM05D004255 ORTHO05D004815 1.8e-45 188.3 200 51.0
DCAR_014992 Daucus carota HOM05D004255 ORTHO05D004815 3.9e-45 187.2 203 52.7
SalBow3G3143 Salvia bowleyana HOM05D004255 ORTHO05D004815 3.9e-45 187.2 203 53.2
Oeu047722.1 Olea europaea HOM05D004255 ORTHO05D004815 8.7e-45 186.0 200 50.5
Cc06_g04130 Coffea canephora HOM05D004255 ORTHO05D004815 7.4e-44 183.0 201 50.7
Peaxi162Scf00311g00013 Petunia axillaris HOM05D004255 ORTHO05D004815 1.1e-42 179.1 201 48.8
Sopen10g033550 Solanum pennellii HOM05D004255 ORTHO05D004815 4.1e-42 177.2 201 48.3
CAN.G1169.8 Capsicum annuum HOM05D004255 ORTHO05D004815 1.9e-39 168.3 226 42.9
Nitab4.5_0005518g0020 Nicotiana tabacum HOM05D004255 ORTHO05D004815 2.5e-39 167.9 204 44.6
Potri.003G008900 Populus trichocarpa HOM05D004255 ORTHO05D004815 5.5e-39 166.8 196 43.9
Rhsim07G0183700 Rhododendron simsii HOM05D004255 ORTHO05D004815 7.2e-39 166.4 202 47.0
Dinv37304 Davidia involucrata HOM05D004255 ORTHO05D004815 1.2e-38 165.6 168 51.8
QL07p044001 Quercus lobata HOM05D004255 ORTHO05D004815 1.6e-38 165.2 200 46.0
Rhsim02G0187700 Rhododendron simsii HOM05D004255 ORTHO05D004815 1.0e-37 162.5 202 46.5
Cfa017586 Carpinus fangiana HOM05D004255 ORTHO05D004815 1.3e-37 162.2 198 47.5
Solyc10g084090.3 Solanum lycopersicum HOM05D004255 ORTHO05D004815 3.0e-37 161.0 173 46.8
RcHm_v2.0_Chr3g0470041 Rosa chinensis HOM05D004255 ORTHO05D004815 8.7e-37 159.5 182 46.2
Haze_22852 Corylus avellana HOM05D000010 ORTHO05D000302 4.3e-36 157.1 195 46.7
Nitab4.5_0001297g0100 Nicotiana tabacum HOM05D004255 ORTHO05D004815 2.2e-35 154.8 155 48.4
TAR633G1109 Trochodendron aralioides HOM05D004255 ORTHO05D004815 2.2e-35 154.8 183 46.4
CiPaw.09G173800 Carya illinoinensis HOM05D004255 ORTHO05D004815 1.1e-34 152.5 200 44.5
Manes.13G072800 Manihot esculenta HOM05D004255 ORTHO05D004815 1.8e-34 151.8 195 45.1
TAR633G2036 Trochodendron aralioides HOM05D004255 ORTHO05D004815 2.4e-34 151.4 179 46.4
Hund05968 Selenicereus undatus HOM05D004255 ORTHO05D004815 5.9e-33 146.7 178 42.7
Ah.08g211800 Amaranthus hybridus HOM05D004255 ORTHO05D004815 1.3e-32 145.6 202 41.6
Thecc.05G064100 Theobroma cacao HOM05D004255 ORTHO05D004815 1.3e-32 145.6 201 41.8
AUR62040455 Chenopodium quinoa HOM05D004255 ORTHO05D004815 3.8e-32 144.1 200 40.0
Ciclev10011284m.g Citrus clementina HOM05D004255 ORTHO05D004815 3.8e-32 144.1 174 43.1
Duzib106G1941 Durio zibethinus HOM05D004255 ORTHO05D004815 3.8e-32 144.1 201 40.8
EL10Ac7g16556 Beta vulgaris HOM05D004255 ORTHO05D004815 5.0e-32 143.7 177 42.4
Gorai.006G165100 Gossypium raimondii HOM05D004255 ORTHO05D004815 1.1e-31 142.5 181 44.8
Gohir.D09G143800 Gossypium hirsutum HOM05D004255 ORTHO05D004815 1.9e-31 141.7 180 45.0
CANSAT80G1593 Cannabis sativa HOM05D004255 ORTHO05D004815 5.5e-31 140.2 195 39.5
FvH4_6g16190 Fragaria vesca HOM05D004255 ORTHO05D004815 1.2e-30 139.0 179 43.6
FAN14G1284 Fragaria x ananassa HOM05D004255 ORTHO05D004815 1.2e-30 139.0 179 43.6
Sc20g0005250 Simmondsia chinensis HOM05D004255 ORTHO05D004815 1.2e-30 139.0 200 39.0
FAN05G2535 Fragaria x ananassa HOM05D004255 ORTHO05D004815 2.7e-30 137.9 179 43.0
CsaV3_3G035890 Cucumis sativus L. HOM05D004255 ORTHO05D004815 1.0e-29 136.0 176 44.3
Atru.chr8.1831 Acer truncatum HOM05D004255 ORTHO05D004815 3.9e-29 134.0 203 38.4
ClCG10G020210 Citrullus lanatus HOM05D004255 ORTHO05D004815 3.9e-29 134.0 178 42.7
Prupe.6G234000 Prunus persica HOM05D004255 ORTHO05D004815 3.9e-29 134.0 176 44.3
MELO3C009348.2 Cucumis melo HOM05D004255 ORTHO05D004815 8.8e-29 132.9 178 42.7
Lj4g0021155 Lotus japonicus HOM05D004255 ORTHO05D004815 8.8e-29 132.9 203 38.4
GSVIVG01025719001 Vitis vinifera HOM05D004255 ORTHO05D004815 2.5e-28 131.3 211 37.4
AUR62041993 Chenopodium quinoa HOM05D004255 ORTHO05D004815 2.8e-27 127.9 142 44.4
Nn2g11560 Nelumbo nucifera HOM05D004255 ORTHO05D004815 2.8e-27 127.9 204 40.7
Hma1.2p1_0297F.1_g117010 Hydrangea macrophylla HOM05D004255 ORTHO05D004815 4.8e-27 127.1 182 37.4
Medtr1g045880 Medicago truncatula HOM05D004255 ORTHO05D004815 1.4e-26 125.6 202 36.1
Cpa.g.sc65.27 Carica papaya HOM05D004255 ORTHO05D004815 4.1e-26 124.0 170 40.0
TPR.G23963 Trifolium pratense HOM05D004255 ORTHO05D004815 5.3e-26 123.6 175 39.4
Aqoxy1G01172 Aquilegia oxysepala HOM05D004255 ORTHO05D004815 6.9e-26 123.2 175 41.1
Prupe.6G107000 Prunus persica HOM05D004255 ORTHO05D004815 1.5e-25 122.1 177 37.3
HanXRQChr07g0206501 Helianthus annuus HOM05D004255 ORTHO05D004815 2.6e-25 121.3 201 38.8
MBI19_g30280_MAGBIO Magnolia biondii HOM05D004255 ORTHO05D004815 3.4e-25 120.9 179 37.4
AT2G32630 Arabidopsis thaliana HOM05D004255 ORTHO05D004815 5.9e-25 120.2 176 41.5
Carub.0004s1396 Capsella rubella HOM05D004255 ORTHO05D004815 5.9e-25 120.2 181 39.2
SHI12481 Sapria himalayana HOM05D004255 ORTHO05D004815 5.9e-25 120.2 202 35.6
TWI74G0375 Tripterygium wilfordii HOM05D004255 ORTHO05D004815 7.7e-25 119.8 176 39.8
Atru.chr12.340 Acer truncatum HOM05D004255 ORTHO05D004815 1.7e-24 118.6 184 34.8
MD04G1094800 Malus domestica HOM05D004255 ORTHO05D004815 1.7e-24 118.6 179 39.1
TWI75G0856 Tripterygium wilfordii HOM05D004255 ORTHO05D004815 2.2e-24 118.2 199 35.2
Haze_20563 Corylus avellana HOM05D004255 ORTHO05D011583 2.9e-24 117.9 157 43.3
Duzib170G0445 Durio zibethinus HOM05D004255 ORTHO05D004815 2.9e-24 117.9 190 36.8
Atru.chr12.311 Acer truncatum HOM05D004255 ORTHO05D004815 3.8e-24 117.5 184 34.8
COL.COLO4_18281 Corchorus olitorius HOM05D004255 ORTHO05D004815 6.5e-24 116.7 157 37.6
Lj1A198G34 Lonicera japonica HOM05D004255 ORTHO05D004815 6.5e-24 116.7 174 36.2
THA.LOC104816036 Tarenaya hassleriana HOM05D004255 ORTHO05D004815 8.5e-24 116.3 180 38.9
CARHR126490 Cardamine hirsuta HOM05D004255 ORTHO05D004815 1.1e-23 115.9 203 36.5
Thecc.09G346900 Theobroma cacao HOM05D004255 ORTHO05D004815 1.1e-23 115.9 179 39.7
Thhalv10017786m.g Eutrema salsugineum HOM05D004255 ORTHO05D004815 1.4e-23 115.5 198 37.9
Glyma.19G000100 Glycine max HOM05D004255 ORTHO05D004815 1.9e-23 115.2 176 38.6
Sp4g14950 Schrenkiella parvula HOM05D004255 ORTHO05D004815 1.9e-23 115.2 198 38.9
CANSAT54G2410 Cannabis sativa HOM05D004255 ORTHO05D004815 3.2e-23 114.4 153 37.9
Haze_23917 Corylus avellana HOM05D004255 ORTHO05D004815 3.2e-23 114.4 172 36.0
Oeu034113.1 Olea europaea HOM05D004255 ORTHO05D004815 4.2e-23 114.0 172 37.8
VMungo0720G0391 Vigna mungo HOM05D004255 ORTHO05D004815 9.4e-23 112.8 181 36.5
Cfa011366 Carpinus fangiana HOM05D004255 ORTHO05D004815 1.2e-22 112.5 168 36.9
RcHm_v2.0_Chr5g0057911 Rosa chinensis HOM05D004255 ORTHO05D004815 1.2e-22 112.5 178 33.7
arahy.Tifrunner.gnm1.ann1.RBUQ0I Arachis hypogaea HOM05D004255 ORTHO05D004815 1.6e-22 112.1 206 36.4
RcHm_v2.0_Chr5g0057961 Rosa chinensis HOM05D004255 ORTHO05D004815 1.6e-22 112.1 178 33.7
Lsat_1_v5_gn_2_106641 Lactuca sativa HOM05D004255 ORTHO05D004815 2.1e-22 111.7 179 37.4
RcHm_v2.0_Chr5g0058011 Rosa chinensis HOM05D004255 ORTHO05D004815 3.6e-22 110.9 178 33.7
MD03G1124300 Malus domestica HOM05D004255 ORTHO05D004815 1.0e-21 109.4 144 38.9
QL01p037114 Quercus lobata HOM05D004255 ORTHO05D004815 1.0e-21 109.4 172 35.5
HanXRQChr09g0259341 Helianthus annuus HOM05D004255 ORTHO05D004815 1.4e-21 109.0 173 33.5
Cc01_g10670 Coffea canephora HOM05D004255 ORTHO05D004815 1.8e-21 108.6 176 35.2
Lsat_1_v5_gn_2_99540 Lactuca sativa HOM05D004255 ORTHO05D004815 1.8e-21 108.6 165 35.2
Gohir.A05G106000 Gossypium hirsutum HOM05D004255 ORTHO05D004815 3.9e-21 107.5 174 35.1
Sc15g0001630 Simmondsia chinensis HOM05D004255 ORTHO05D004815 5.1e-21 107.1 170 35.9
Duzib168G2269 Durio zibethinus HOM05D004255 ORTHO05D004815 8.8e-21 106.3 151 36.4
Aa31LG5G4720 Aethionema arabicum HOM05D004255 ORTHO05D004815 1.1e-20 105.9 176 36.4
Phvul.007G232500 Phaseolus vulgaris HOM05D004255 ORTHO05D004815 1.5e-20 105.5 179 36.3
CiPaw.14G077900 Carya illinoinensis HOM05D004255 ORTHO05D004815 2.0e-20 105.1 181 33.7
Gorai.009G110100 Gossypium raimondii HOM05D004255 ORTHO05D004815 2.6e-20 104.8 151 35.8
BcaC01g05901 Brassica carinata HOM05D004255 ORTHO05D004815 3.3e-20 104.4 173 38.2
AL4G22170 Arabidopsis lyrata HOM05D004255 ORTHO05D004815 4.4e-20 104.0 172 34.9
BolC3t14507H Brassica oleracea HOM05D004255 ORTHO05D004815 4.4e-20 104.0 173 38.7
BraA03t11081Z Brassica rapa HOM05D004255 ORTHO05D004815 4.4e-20 104.0 173 38.7
CARHR004520 Cardamine hirsuta HOM05D004255 ORTHO05D004815 4.4e-20 104.0 180 33.9
PGR083G1347 Punica granatum HOM05D004255 ORTHO05D004815 7.4e-20 103.2 200 32.0
C03p21260 Brassica napus HOM05D004255 ORTHO05D004815 1.3e-19 102.4 173 38.2
FAN09G2699 Fragaria x ananassa HOM05D004255 ORTHO05D004815 1.7e-19 102.1 133 40.6
BcaB01g03971 Brassica carinata HOM05D004255 ORTHO05D004815 2.2e-19 101.7 192 35.9
A03p18210 Brassica napus HOM05D004255 ORTHO05D004815 3.7e-19 100.9 173 38.2
Sopen10g033540 Solanum pennellii HOM05D004255 ORTHO05D004815 6.3e-19 100.1 148 36.5
AT2G28050 Arabidopsis thaliana HOM05D004255 ORTHO05D004815 8.2e-19 99.8 188 33.0
TAR633G0618 Trochodendron aralioides HOM05D004255 ORTHO05D004815 1.8e-18 98.6 104 48.1
Sopen06g005230 Solanum pennellii HOM05D004255 ORTHO05D004815 2.4e-18 98.2 169 34.9
PSO063G1866 Papaver somniferum HOM05D004255 ORTHO05D004815 3.1e-18 97.8 205 35.1
Ah.01g003110 Amaranthus hybridus HOM05D004255 ORTHO05D004815 4.1e-18 97.4 200 32.5
Rhsim04G0144500 Rhododendron simsii HOM05D004255 ORTHO05D004815 4.1e-18 97.4 103 48.5
CARHR120730 Cardamine hirsuta HOM05D004255 ORTHO05D004815 9.1e-18 96.3 171 31.6
Solyc06g010275.1 Solanum lycopersicum HOM05D004255 ORTHO05D004815 9.1e-18 96.3 169 34.3
Carub.0004s0880 Capsella rubella HOM05D004255 ORTHO05D004815 1.6e-17 95.5 167 30.5
PSO339G5596 Papaver somniferum HOM05D004255 ORTHO05D004815 1.6e-17 95.5 205 35.1
AUR62022768 Chenopodium quinoa HOM05D004255 ORTHO05D004815 3.8e-16 90.9 179 31.8
Thhalv10016624m.g Eutrema salsugineum HOM05D004255 ORTHO05D004815 6.5e-16 90.1 173 31.2
PGR102G0358 Punica granatum HOM05D004255 ORTHO05D004815 4.2e-15 87.4 152 31.6
Solyc06g010270.1 Solanum lycopersicum HOM05D004255 ORTHO05D004815 4.2e-15 87.4 157 33.1
BcaB02g10133 Brassica carinata HOM05D004255 ORTHO05D004815 9.4e-15 86.3 165 28.5
PGSC0003DMG400015738 Solanum tuberosum HOM05D004255 ORTHO05D004815 1.2e-14 85.9 195 31.3
PGSC0003DMG401010456 Solanum tuberosum HOM05D004255 ORTHO05D004815 1.2e-14 85.9 103 37.9
Sp4g10830 Schrenkiella parvula HOM05D004255 ORTHO05D004815 2.1e-14 85.1 172 30.2
Aa31LG5G8100 Aethionema arabicum HOM05D004255 ORTHO05D004815 4.7e-14 84.0 148 28.4
RcHm_v2.0_Chr5g0058061 Rosa chinensis HOM05D004255 ORTHO05D004815 2.3e-13 81.6 140 32.9
Manes.11G149500 Manihot esculenta HOM05D004255 ORTHO05D004815 4.0e-13 80.9 147 32.0
Nitab4.5_0001297g0090 Nicotiana tabacum HOM05D004255 ORTHO05D004815 5.2e-13 80.5 100 41.0
Glyma.20G081700 Glycine max HOM05D004255 ORTHO05D004815 2.6e-12 78.2 156 32.7
Sed0023037 Sechium edule HOM05D004255 ORTHO05D004815 1.7e-11 75.5 89 43.8
PGSC0003DMG400010458 Solanum tuberosum HOM05D004255 ORTHO05D004815 3.1e-10 71.2 72 45.8
Eucgr.K03591 Eucalyptus grandis HOM05D004255 ORTHO05D004815 4.1e-10 70.9 90 42.2
HPP92_026817 Vanilla planifolia HOM05D004255 ORTHO05D004815 2.0e-09 68.6 103 35.0
CDE02G3824 Ceratophyllum demersum HOM05D004255 ORTHO05D004815 2.7e-09 68.2 167 29.9
AL4G28030 Arabidopsis lyrata HOM05D004255 ORTHO05D004815 4.5e-09 67.4 83 42.2
CANSAT21G1589 Cannabis sativa HOM05D004255 ORTHO05D004815 1.7e-08 65.5 82 40.2
BraA07t29569Z Brassica rapa HOM05D004255 ORTHO05D004815 2.9e-08 64.7 138 28.3
Ca_11878_v3 Cicer arietinum L. HOM05D004255 ORTHO05D004815 5.0e-08 63.9 89 36.0
COL.COLO4_30932 Corchorus olitorius HOM05D000090 ORTHO05D004815 5.0e-08 63.9 90 36.7
ATR1136G126 Amborella trichopoda HOM05D004255 ORTHO05D004815 1.5e-07 62.4 108 31.5
Gohir.D05G106066 Gossypium hirsutum HOM05D004255 ORTHO05D004815 1.9e-07 62.0 147 32.0
Sabra03G0004500 Salix brachista HOM05D004255 ORTHO05D004815 2.7e-06 58.2 86 38.4


User provided reference genes

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