Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold75G24819 Striga asiatica HOM05D005722 ORTHO05D007934 0.0e+00 1092.4 550 100.0
Migut.J00472 Erythranthe guttata HOM05D005722 ORTHO05D007934 9.7e-226 786.9 486 78.6
MSTRG.19206 Avicennia marina HOM05D005722 ORTHO05D007934 5.5e-221 771.2 562 70.6
CiPaw.09G004900 Carya illinoinensis HOM05D005722 ORTHO05D007934 7.9e-220 767.3 486 78.6
Sabra06G0094100 Salix brachista HOM05D005722 ORTHO05D007934 5.2e-219 764.6 495 76.8
Hma1.2p1_0547F.1_g176330 Hydrangea macrophylla HOM05D005722 ORTHO05D007934 3.3e-218 761.9 470 78.9
Cfa016476 Carpinus fangiana HOM05D005722 ORTHO05D007934 7.4e-218 760.8 510 74.5
Rhsim03G0086400 Rhododendron simsii HOM05D005722 ORTHO05D007934 1.3e-217 760.0 549 71.2
CSS0018899 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 2.4e-216 755.7 562 69.0
SalBow3G1081 Salvia bowleyana HOM05D005722 ORTHO05D007934 2.4e-216 755.7 485 76.3
Atru.chr8.1708 Acer truncatum HOM05D005722 ORTHO05D007934 3.1e-216 755.4 547 71.1
Duzib128G0866 Durio zibethinus HOM05D005722 ORTHO05D007934 3.1e-216 755.4 486 76.5
vmacro23004 Vaccinium macrocarpon HOM05D005722 ORTHO05D007934 7.0e-216 754.2 478 77.4
SalBow3G1392 Salvia bowleyana HOM05D005722 ORTHO05D007934 1.2e-215 753.4 485 76.1
CSS0022139 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 1.6e-215 753.1 485 75.5
Gohir.A09G143300 Gossypium hirsutum HOM05D005722 ORTHO05D007934 2.6e-215 752.3 570 68.4
Gorai.006G160000 Gossypium raimondii HOM05D005722 ORTHO05D007934 5.9e-215 751.1 546 70.1
Cc06_g04740 Coffea canephora HOM05D005722 ORTHO05D007934 7.7e-215 750.7 512 73.6
Potri.006G119500 Populus trichocarpa HOM05D005722 ORTHO05D007934 1.0e-214 750.4 537 71.7
Prupe.7G123300 Prunus persica HOM05D005722 ORTHO05D007934 1.3e-214 750.0 567 68.3
Cpa.g.sc5.129 Carica papaya HOM05D005722 ORTHO05D007934 6.5e-214 747.7 485 75.7
DCAR_015016 Daucus carota HOM05D005722 ORTHO05D007934 6.5e-214 747.7 494 73.9
MD12G1103200 Malus domestica HOM05D005722 ORTHO05D007934 8.5e-214 747.3 551 68.1
QL07p041452 Quercus lobata HOM05D005722 ORTHO05D007934 8.5e-214 747.3 540 70.2
TPR.G31667 Trifolium pratense HOM05D005722 ORTHO05D007934 8.5e-214 747.3 477 76.9
Lj5g0013810 Lotus japonicus HOM05D005722 ORTHO05D007934 1.1e-213 746.9 486 74.3
CANSAT56G0690 Cannabis sativa HOM05D005722 ORTHO05D007934 1.5e-213 746.5 559 67.8
COL.COLO4_22250 Corchorus olitorius HOM05D005722 ORTHO05D007934 3.2e-213 745.3 485 75.7
Ciclev10011424m.g Citrus clementina HOM05D005722 ORTHO05D007934 5.5e-213 744.6 485 74.4
Lj1g0006800 Lotus japonicus HOM05D005722 ORTHO05D007934 7.2e-213 744.2 558 69.2
Thecc.05G075200 Theobroma cacao HOM05D005722 ORTHO05D007934 9.4e-213 743.8 486 75.1
arahy.Tifrunner.gnm1.ann1.D7QF3J Arachis hypogaea HOM05D005722 ORTHO05D007934 1.6e-212 743.0 493 72.6
arahy.Tifrunner.gnm1.ann1.P0W3IN Arachis hypogaea HOM05D005722 ORTHO05D007934 1.6e-212 743.0 493 72.6
Manes.09G048478 Manihot esculenta HOM05D005722 ORTHO05D007934 2.1e-212 742.7 562 68.3
Ah.08g211270 Amaranthus hybridus HOM05D005722 ORTHO05D007934 4.7e-212 741.5 484 75.8
AUR62026979 Chenopodium quinoa HOM05D005722 ORTHO05D007934 6.1e-212 741.1 552 68.5
TAR623G1222 Trochodendron aralioides HOM05D005722 ORTHO05D007934 6.1e-212 741.1 568 68.5
Peaxi162Scf00138g00041 Petunia axillaris HOM05D005722 ORTHO05D007934 8.0e-212 740.7 480 76.0
PGR004G2571 Punica granatum HOM05D005722 ORTHO05D007934 8.0e-212 740.7 546 70.0
FvH4_6g17170 Fragaria vesca HOM05D005722 ORTHO05D007934 1.0e-211 740.3 503 73.2
RcHm_v2.0_Chr3g0471261 Rosa chinensis HOM05D005722 ORTHO05D007934 2.3e-211 739.2 503 72.6
FAN05G1451 Fragaria x ananassa HOM05D005722 ORTHO05D007934 8.8e-211 737.3 547 69.5
Medtr1g062130 Medicago truncatula HOM05D005722 ORTHO05D007934 1.2e-210 736.9 486 73.7
Nn2g13890 Nelumbo nucifera HOM05D005722 ORTHO05D007934 1.2e-210 736.9 541 70.6
FAN05G4610 Fragaria x ananassa HOM05D005722 ORTHO05D007934 2.0e-210 736.1 547 69.3
Psat3g038760 Pisum sativum HOM05D005722 ORTHO05D007934 4.4e-210 734.9 475 75.4
AUR62042706 Chenopodium quinoa HOM05D005722 ORTHO05D007934 1.3e-209 733.4 554 68.1
Lalb_Chr02g0155431 Lupinus albus HOM05D005722 ORTHO05D007934 1.3e-209 733.4 541 68.9
Psat6g077240 Pisum sativum HOM05D005722 ORTHO05D007934 1.7e-209 733.0 484 72.7
THA.LOC104816667 Tarenaya hassleriana HOM05D005722 ORTHO05D007934 1.7e-209 733.0 466 78.1
EL10Ac7g16706 Beta vulgaris HOM05D005722 ORTHO05D007934 2.8e-209 732.3 484 74.8
Medtr7g102810 Medicago truncatula HOM05D005722 ORTHO05D007934 2.8e-209 732.3 470 76.4
Aqoxy1G01041 Aquilegia oxysepala HOM05D005722 ORTHO05D007934 6.3e-209 731.1 546 68.9
PGSC0003DMG400003879 Solanum tuberosum HOM05D005722 ORTHO05D007934 1.8e-208 729.6 485 74.8
TWI74G0410 Tripterygium wilfordii HOM05D005722 ORTHO05D007934 4.1e-208 728.4 545 68.3
PSO063G5110 Papaver somniferum HOM05D005722 ORTHO05D007934 7.0e-208 727.6 487 72.9
Phvul.007G226300 Phaseolus vulgaris HOM05D005722 ORTHO05D007934 7.0e-208 727.6 485 73.6
Aa31LG1G21640 Aethionema arabicum HOM05D005722 ORTHO05D007934 9.1e-208 727.2 487 73.9
PSO339G6299 Papaver somniferum HOM05D005722 ORTHO05D007934 9.1e-208 727.2 487 73.3
Sp6g39190 Schrenkiella parvula HOM05D005722 ORTHO05D007934 1.2e-207 726.9 484 73.6
Ca_04564_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 2.7e-207 725.7 539 67.7
Lalb_Chr25g0288811 Lupinus albus HOM05D005722 ORTHO05D007934 4.5e-207 724.9 483 74.1
C03p01590 Brassica napus HOM05D005722 ORTHO05D007934 5.9e-207 724.5 484 73.3
Glyma.10G063100 Glycine max HOM05D005722 ORTHO05D007934 5.9e-207 724.5 501 71.3
Nitab4.5_0004731g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 5.9e-207 724.5 475 74.7
VMungo0720G2103 Vigna mungo HOM05D005722 ORTHO05D007934 1.0e-206 723.8 474 74.1
BraA03t09503Z Brassica rapa HOM05D005722 ORTHO05D007934 2.2e-206 722.6 484 72.9
Carub.0006s0238 Capsella rubella HOM05D005722 ORTHO05D007934 2.9e-206 722.2 486 73.7
CAN.G1038.3 Capsicum annuum HOM05D005722 ORTHO05D007934 3.8e-206 721.8 480 74.2
CARHR209770 Cardamine hirsuta HOM05D005722 ORTHO05D007934 3.8e-206 721.8 486 73.0
A03p01230 Brassica napus HOM05D005722 ORTHO05D007934 5.0e-206 721.5 484 72.9
BolC3t12711H Brassica oleracea HOM05D005722 ORTHO05D007934 5.0e-206 721.5 484 72.9
Thhalv10015725m.g Eutrema salsugineum HOM05D005722 ORTHO05D007934 6.5e-206 721.1 468 75.2
Glyma.13G147700 Glycine max HOM05D005722 ORTHO05D007934 1.5e-205 719.9 527 69.6
ECA238G3369 Erigeron canadensis HOM05D005722 ORTHO05D007934 3.2e-205 718.8 557 67.7
Sopen09g003380 Solanum pennellii HOM05D005722 ORTHO05D007934 9.4e-205 717.2 485 73.2
Sc20g0005780 Simmondsia chinensis HOM05D005722 ORTHO05D007934 1.6e-204 716.5 502 70.7
AT5G03555 Arabidopsis thaliana HOM05D005722 ORTHO05D007934 1.4e-203 713.4 487 72.5
Lsat_1_v5_gn_2_20401 Lactuca sativa HOM05D005722 ORTHO05D007934 1.8e-203 713.0 548 67.7
unitig_578.g15784 Utricularia gibba HOM05D005722 ORTHO05D007934 8.8e-203 710.7 477 72.5
AL6G13040 Arabidopsis lyrata HOM05D005722 ORTHO05D007934 2.0e-202 709.5 487 72.1
TPR.G22453 Trifolium pratense HOM05D005722 ORTHO05D007934 5.7e-202 708.0 525 68.6
HanXRQChr14g0432851 Helianthus annuus HOM05D005722 ORTHO05D007934 7.5e-202 707.6 529 68.2
MELO3C009405.2 Cucumis melo HOM05D005722 ORTHO05D007934 1.8e-200 703.0 487 71.7
ClCG10G019670 Citrullus lanatus HOM05D005722 ORTHO05D007934 2.4e-200 702.6 532 67.9
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 7.0e-200 701.0 461 74.6
Haze_19473 Corylus avellana HOM05D005722 ORTHO05D007934 2.0e-199 699.5 452 77.2
MBI18_g39612_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 5.9e-199 698.0 538 65.2
Gohir.D09G139500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 2.3e-198 696.0 501 71.3
Gorai.006G160100 Gossypium raimondii HOM05D005722 ORTHO05D007934 1.9e-197 693.0 551 64.6
Gohir.D09G139600 Gossypium hirsutum HOM05D005722 ORTHO05D007934 5.5e-197 691.4 549 64.8
Sed0005717 Sechium edule HOM05D005722 ORTHO05D007934 7.2e-197 691.0 531 66.1
Gohir.A09G143500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.8e-195 686.4 551 64.4
CsaV3_3G036500 Cucumis sativus L. HOM05D005722 ORTHO05D007934 1.2e-194 683.7 538 66.0
FAN02G1363 Fragaria x ananassa HOM05D005722 ORTHO05D007934 1.9e-189 666.4 461 72.5
ATR0009G019 Amborella trichopoda HOM05D005722 ORTHO05D007934 1.2e-188 663.7 486 66.3
FAN14G5091 Fragaria x ananassa HOM05D005722 ORTHO05D007934 1.0e-187 660.6 438 74.2
MBI18_g19054_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 2.4e-184 649.4 481 64.2
MBI18_g31623_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 4.1e-184 648.7 480 64.6
MBI18_g39457_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 1.6e-183 646.7 480 64.4
SEGI_35570 Sequoiadendron giganteum HOM05D005722 ORTHO05D007934 3.5e-183 645.6 475 64.8
Ca_30109_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 1.3e-182 643.7 411 76.4
Nitab4.5_0003906g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 2.3e-182 642.9 479 68.3
HPP92_025568 Vanilla planifolia HOM05D005722 ORTHO05D007934 3.1e-179 632.5 461 66.8
Eucgr.A01597 Eucalyptus grandis HOM05D005722 ORTHO05D007934 1.3e-177 627.1 486 65.8
Os02g0666700 Oryza sativa ssp. japonica HOM05D005722 ORTHO05D007934 1.9e-176 623.2 503 62.0
GSVIVG01033705001 Vitis vinifera HOM05D005722 ORTHO05D007934 3.5e-175 619.0 550 60.4
Zm00001eb249990 Zea mays HOM05D005722 ORTHO05D007934 1.2e-172 610.5 516 59.5
Cc06_g04750 Coffea canephora HOM05D005722 ORTHO05D007934 2.0e-170 603.2 503 60.4
Cfa016468 Carpinus fangiana HOM05D005722 ORTHO05D007934 1.3e-169 600.5 443 68.6
Dinv35829 Davidia involucrata HOM05D005722 ORTHO05D007934 3.7e-169 599.0 462 66.2
CDE08G1312 Ceratophyllum demersum HOM05D005722 ORTHO05D007934 3.6e-164 582.4 398 72.9
Pp3c14_20990 Physcomitrium patens HOM05D005722 ORTHO05D007934 1.9e-157 560.1 502 56.4
Pp3c1_30640 Physcomitrium patens HOM05D005722 ORTHO05D007934 1.2e-156 557.4 499 56.5
Mapoly0002s0120 Marchantia polymorpha HOM05D005722 ORTHO05D007934 6.2e-156 555.1 479 54.9
SMO115G0026 Selaginella moellendorffii HOM05D005722 ORTHO05D007934 3.0e-150 536.2 479 55.5
Actinidia26637 Actinidia chinensis HOM05D005722 ORTHO05D007934 2.3e-142 510.0 459 60.8
Cre09.g389356 Chlamydomonas reinhardtii HOM05D005722 ORTHO05D007934 1.8e-139 500.4 533 48.4
Lj2P123T37 Lonicera japonica HOM05D005722 ORTHO05D007934 1.1e-133 481.1 313 76.4
Actinidia28931 Actinidia chinensis HOM05D005722 ORTHO05D007934 2.0e-130 470.3 373 66.2
Sc20g0005800 Simmondsia chinensis HOM05D005722 ORTHO05D007934 1.1e-125 454.5 312 72.8
MCO11G702 Micromonas commoda HOM05D005722 ORTHO05D007934 8.2e-124 448.4 502 47.0
PRCOL_00006021 Prasinoderma coloniale HOM05D005722 ORTHO05D007934 8.8e-118 428.3 519 45.1
Haze_19472 Corylus avellana HOM05D005722 ORTHO05D007934 6.0e-66 256.1 164 75.6
Cfa025019 Carpinus fangiana HOM05D005722 ORTHO05D123305 1.5e-61 241.5 486 30.7
Haze_02843 Corylus avellana HOM05D005722 ORTHO05D029153 1.4e-51 208.4 136 73.5
Pp3s34_270 Physcomitrium patens HOM05D005722 ORTHO05D317165 1.1e-38 165.6 427 26.7
Sc20g0005790 Simmondsia chinensis HOM05D005722 ORTHO05D029153 3.1e-38 164.1 98 74.5
TPR.G39511 Trifolium pratense HOM05D005722 ORTHO05D029153 1.1e-27 129.0 70 81.4
Lsat_1_v5_gn_4_152401 Lactuca sativa HOM05D005722 ORTHO05D007934 8.7e-25 119.4 80 77.5
MCO10G252 Micromonas commoda HOM05D005722 ORTHO05D270642 1.7e-20 105.1 441 28.6
MCO11G808 Micromonas commoda HOM05D005722 ORTHO05D268580 4.9e-20 103.6 431 25.8
FAN14G5603 Fragaria x ananassa HOM05D005722 ORTHO05D029153 2.9e-12 77.8 64 62.5


User provided reference genes

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