Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold75G24776 Striga asiatica HOM05D005036 ORTHO05D005881 6.3e-98 360.9 202 100.0
C03p43440 Brassica napus HOM05D005036 ORTHO05D005881 1.9e-25 120.2 154 46.1
BolC3t16615H Brassica oleracea HOM05D005036 ORTHO05D005881 1.9e-25 120.2 154 46.1
BcaC01g04252 Brassica carinata HOM05D005036 ORTHO05D005881 2.4e-25 119.8 154 46.1
A03p35790 Brassica napus HOM05D005036 ORTHO05D005881 5.4e-25 118.6 154 45.5
BraA03t12751Z Brassica rapa HOM05D005036 ORTHO05D005881 5.4e-25 118.6 154 45.5
Psat6g104720 Pisum sativum HOM05D001839 ORTHO05D001867 6.7e-23 111.7 93 62.4
SGA_v2.0_scaffold40G15474 Striga asiatica HOM05D005036 ORTHO05D005881 4.3e-22 109.0 159 46.5
MSTRG.10334 Avicennia marina HOM05D005036 ORTHO05D005881 1.0e-18 97.8 120 50.8
vmacro08795 Vaccinium macrocarpon HOM05D005036 ORTHO05D005881 1.9e-17 93.6 121 45.5
Sc02g0001470 Simmondsia chinensis HOM05D005036 ORTHO05D005881 7.1e-17 91.7 149 41.6
BcaC05g29716 Brassica carinata HOM05D005036 ORTHO05D005881 1.0e-15 87.8 123 41.5
Aa31LG3G2370 Aethionema arabicum HOM05D005036 ORTHO05D005881 1.1e-14 84.3 158 38.6
Sp3g08240 Schrenkiella parvula HOM05D005036 ORTHO05D005881 2.5e-14 83.2 150 38.7
Nitab4.5_0003268g0010 Nicotiana tabacum HOM05D005036 ORTHO05D005881 4.3e-14 82.4 148 39.9
Peaxi162Scf01128g00018 Petunia axillaris HOM05D005036 ORTHO05D005881 5.7e-14 82.0 124 43.5
SGA_v2.0_scaffold224G42932 Striga asiatica HOM05D005036 ORTHO05D005881 2.1e-13 80.1 160 40.0
BcaC05g29714 Brassica carinata HOM05D005036 ORTHO05D005881 1.4e-12 77.4 123 38.2
BcaC05g29715 Brassica carinata HOM05D005036 ORTHO05D005881 1.4e-12 77.4 123 38.2
BcaC05g29712 Brassica carinata HOM05D005036 ORTHO05D005881 2.6e-11 73.2 123 36.6
BcaC05g29713 Brassica carinata HOM05D005036 ORTHO05D005881 2.6e-11 73.2 123 36.6
MD04G1089000 Malus domestica HOM05D005036 ORTHO05D005881 3.4e-11 72.8 120 43.3
Sc02g0001400 Simmondsia chinensis HOM05D005036 ORTHO05D005881 5.8e-11 72.0 151 35.8
Migut.L01721 Erythranthe guttata HOM05D005036 ORTHO05D005881 3.2e-09 66.2 113 43.4
Migut.J00453 Erythranthe guttata HOM05D005036 ORTHO05D005881 5.5e-09 65.5 159 34.6
RhsimUnG0004000 Rhododendron simsii HOM05D005036 ORTHO05D005881 9.3e-09 64.7 149 35.6
RhsimUnG0067400 Rhododendron simsii HOM05D005036 ORTHO05D005881 9.3e-09 64.7 149 35.6
Actinidia32478 Actinidia chinensis HOM05D005036 ORTHO05D005881 1.6e-08 63.9 150 36.0
MELO3C009379.2 Cucumis melo HOM05D005036 ORTHO05D005881 1.6e-08 63.9 150 36.0
Solyc10g083870.2 Solanum lycopersicum HOM05D005036 ORTHO05D005881 1.6e-08 63.9 50 66.0
Oeu016995.1 Olea europaea HOM05D005036 ORTHO05D005881 3.5e-08 62.8 160 33.1
CsaV3_3G036210 Cucumis sativus L. HOM05D005036 ORTHO05D005881 4.6e-08 62.4 173 34.1
Oeu056532.1 Olea europaea HOM05D005036 ORTHO05D005881 4.6e-08 62.4 160 33.1
Atru.chr4.2604 Acer truncatum HOM05D005036 ORTHO05D005881 1.0e-07 61.2 57 59.6
Solyc09g008450.3 Solanum lycopersicum HOM05D005036 ORTHO05D005881 1.0e-07 61.2 117 40.2
HPP92_008393 Vanilla planifolia HOM05D005036 ORTHO05D005881 1.0e-07 61.2 81 43.2
MBI15_g24508_MAGBIO Magnolia biondii HOM05D005036 ORTHO05D005881 1.3e-07 60.8 142 34.5
Aqoxy1G01100 Aquilegia oxysepala HOM05D005036 ORTHO05D005881 3.9e-07 59.3 151 33.1
Atru.chr6.1495 Acer truncatum HOM05D005036 ORTHO05D005881 5.1e-07 58.9 44 68.2
unitig_578.g16379 Utricularia gibba HOM05D000468 ORTHO05D005881 5.1e-07 58.9 155 32.9
Cfa017655 Carpinus fangiana HOM05D005036 ORTHO05D005881 8.7e-07 58.2 121 37.2
Actinidia31315 Actinidia chinensis HOM05D005036 ORTHO05D005881 1.1e-06 57.8 165 33.3
Thhalv10021529m.g Eutrema salsugineum HOM05D005036 ORTHO05D005881 1.5e-06 57.4 154 31.8
Os03g0145800 Oryza sativa ssp. japonica HOM05D005036 ORTHO05D005881 2.5e-06 56.6 121 35.5
MBI13_g13833_MAGBIO Magnolia biondii HOM05D005036 ORTHO05D005881 7.4e-06 55.1 120 35.8
Cpa.g.sc92.91 Carica papaya HOM05D005036 ORTHO05D005881 9.7e-06 54.7 149 32.9
Haze_20497 Corylus avellana HOM05D005036 ORTHO05D005881 9.7e-06 54.7 149 32.2


User provided reference genes

Program Settings