Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold75G24749 Striga asiatica HOM05D005696 ORTHO05D007099 1.4e-130 469.5 229 100.0
Oeu017678.1 Olea europaea HOM05D005696 ORTHO05D007099 2.6e-68 262.7 158 79.7
Oeu017679.1 Olea europaea HOM05D005696 ORTHO05D007099 2.6e-68 262.7 158 79.7
SalBow6G6426 Salvia bowleyana HOM05D005696 ORTHO05D007099 1.9e-66 256.5 160 76.2
SalBow3G1016 Salvia bowleyana HOM05D005696 ORTHO05D007099 2.5e-66 256.1 156 77.6
COL.COLO4_29734 Corchorus olitorius HOM05D005696 ORTHO05D007099 5.5e-66 255.0 158 74.1
MSTRG.19260 Avicennia marina HOM05D005696 ORTHO05D007099 9.4e-66 254.2 158 73.4
Dinv21209 Davidia involucrata HOM05D005696 ORTHO05D007099 1.2e-65 253.8 153 77.1
Thecc.05G089100 Theobroma cacao HOM05D005696 ORTHO05D007099 1.0e-64 250.8 158 72.8
CSS0033781 Camellia sinensis var. sinensis HOM05D005696 ORTHO05D007099 2.3e-64 249.6 153 75.8
Duzib106G0894 Durio zibethinus HOM05D005696 ORTHO05D007099 4.0e-64 248.8 158 72.8
Hma1.2p1_0084F.1_g043820 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 8.8e-64 247.7 158 75.3
Hma1.2p1_0820F.1_g223835 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 8.8e-64 247.7 158 75.3
HanXRQChr03g0060731 Helianthus annuus HOM05D005696 ORTHO05D007099 1.5e-63 246.9 158 71.5
Sed0022063 Sechium edule HOM05D005696 ORTHO05D007099 1.5e-63 246.9 156 71.8
unitig_744.g24697 Utricularia gibba HOM05D001616 ORTHO05D007099 4.4e-63 245.4 159 69.8
Cc03_g11090 Coffea canephora HOM05D005696 ORTHO05D007099 7.5e-63 244.6 151 73.5
Lsat_1_v5_gn_7_37701 Lactuca sativa HOM05D005696 ORTHO05D007099 7.5e-63 244.6 158 71.5
GSVIVG01033843001 Vitis vinifera HOM05D005696 ORTHO05D007099 7.5e-63 244.6 158 70.3
Gorai.002G158300 Gossypium raimondii HOM05D005696 ORTHO05D007099 1.3e-62 243.8 158 70.9
Gohir.D01G127700 Gossypium hirsutum HOM05D005696 ORTHO05D007099 1.7e-62 243.4 158 70.9
Lj2P1003T8 Lonicera japonica HOM05D005696 ORTHO05D007099 2.2e-62 243.0 150 74.0
PGR142G1689 Punica granatum HOM05D005696 ORTHO05D007099 2.2e-62 243.0 153 72.5
Lj2P137T17 Lonicera japonica HOM05D005696 ORTHO05D007099 2.8e-62 242.7 150 73.3
Rhsim03G0075100 Rhododendron simsii HOM05D005696 ORTHO05D007099 3.7e-62 242.3 155 72.9
Gohir.A01G138000 Gossypium hirsutum HOM05D005696 ORTHO05D007099 6.3e-62 241.5 158 70.3
Nitab4.5_0000794g0110 Nicotiana tabacum HOM05D005696 ORTHO05D007099 6.3e-62 241.5 155 69.7
QL07p039009 Quercus lobata HOM05D005696 ORTHO05D007099 6.3e-62 241.5 157 70.1
ClCG10G018970 Citrullus lanatus HOM05D005696 ORTHO05D007099 8.3e-62 241.1 169 66.9
Manes.08G025300 Manihot esculenta HOM05D005696 ORTHO05D007099 8.3e-62 241.1 158 70.9
CsaV3_3G037280 Cucumis sativus L. HOM05D005696 ORTHO05D007099 1.1e-61 240.7 156 71.8
Potri.018G086400 Populus trichocarpa HOM05D005696 ORTHO05D007099 1.1e-61 240.7 149 73.8
arahy.Tifrunner.gnm1.ann1.NXU1NB Arachis hypogaea HOM05D005696 ORTHO05D007099 1.4e-61 240.4 213 55.9
ECA240G0707 Erigeron canadensis HOM05D005696 ORTHO05D007099 1.4e-61 240.4 158 69.0
QL07p038757 Quercus lobata HOM05D005696 ORTHO05D007099 1.4e-61 240.4 157 69.4
Sabra18G0074700 Salix brachista HOM05D005696 ORTHO05D007099 1.8e-61 240.0 147 73.5
Sopen09g004540 Solanum pennellii HOM05D005696 ORTHO05D007099 2.4e-61 239.6 158 69.0
PGSC0003DMG400008956 Solanum tuberosum HOM05D005696 ORTHO05D007099 2.4e-61 239.6 153 70.6
MELO3C009473.2 Cucumis melo HOM05D005696 ORTHO05D007099 3.1e-61 239.2 156 71.8
Atru.chr8.1538 Acer truncatum HOM05D005696 ORTHO05D007099 4.1e-61 238.8 158 67.1
CANSAT80G0528 Cannabis sativa HOM05D005696 ORTHO05D007099 4.1e-61 238.8 158 71.5
CiPaw.09G014000 Carya illinoinensis HOM05D005696 ORTHO05D007099 4.1e-61 238.8 161 67.1
MD06G1040400 Malus domestica HOM05D005696 ORTHO05D007099 4.1e-61 238.8 148 73.0
CAN.G397.49 Capsicum annuum HOM05D005696 ORTHO05D007099 9.1e-61 237.7 149 71.1
Ca_09006_v3 Cicer arietinum L. HOM05D005696 ORTHO05D007099 9.1e-61 237.7 150 72.0
Rhsim03G0187900 Rhododendron simsii HOM05D005696 ORTHO05D007099 9.1e-61 237.7 147 72.8
TPR.G22495 Trifolium pratense HOM05D005696 ORTHO05D007099 9.1e-61 237.7 150 71.3
Eucgr.K02040 Eucalyptus grandis HOM05D005696 ORTHO05D007099 1.2e-60 237.3 168 67.9
TWI53G1247 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 1.2e-60 237.3 146 74.7
Sc02g0000250 Simmondsia chinensis HOM05D005696 ORTHO05D007099 3.5e-60 235.7 179 62.0
Cfa016607 Carpinus fangiana HOM05D005696 ORTHO05D007099 4.5e-60 235.3 151 70.2
DCAR_013385 Daucus carota HOM05D005696 ORTHO05D007099 4.5e-60 235.3 158 69.0
Sed0001709 Sechium edule HOM05D005696 ORTHO05D007099 4.5e-60 235.3 156 68.6
TPR.G19517 Trifolium pratense HOM05D005696 ORTHO05D007099 4.5e-60 235.3 150 70.0
TPR.G30027 Trifolium pratense HOM05D005696 ORTHO05D007099 4.5e-60 235.3 150 71.3
Aa31LG5G12820 Aethionema arabicum HOM05D005696 ORTHO05D007099 5.9e-60 235.0 150 69.3
Haze_19611 Corylus avellana HOM05D005696 ORTHO05D007099 5.9e-60 235.0 151 70.2
Solyc09g009780.4 Solanum lycopersicum HOM05D005696 ORTHO05D007099 5.9e-60 235.0 160 66.9
Medtr7g104610 Medicago truncatula HOM05D005696 ORTHO05D007099 1.3e-59 233.8 150 68.7
Lalb_Chr01g0018151 Lupinus albus HOM05D005696 ORTHO05D007099 2.2e-59 233.0 155 70.3
AUR62028517 Chenopodium quinoa HOM05D005696 ORTHO05D007099 3.8e-59 232.3 151 67.5
Ciclev10012817m.g Citrus clementina HOM05D005696 ORTHO05D007099 3.8e-59 232.3 160 65.6
Aqoxy1G00460 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 6.5e-59 231.5 148 69.6
Hma1.2p1_0232F.1_g097930 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 6.5e-59 231.5 149 73.2
Nn2g14158 Nelumbo nucifera HOM05D005696 ORTHO05D007099 6.5e-59 231.5 152 67.8
THA.LOC104820979 Tarenaya hassleriana HOM05D005696 ORTHO05D007099 1.5e-58 230.3 156 67.9
Ah.01g020980 Amaranthus hybridus HOM05D005696 ORTHO05D007099 3.2e-58 229.2 147 68.7
Psat3g033280 Pisum sativum HOM05D005696 ORTHO05D007099 3.2e-58 229.2 148 70.3
EL10Ac7g16916 Beta vulgaris HOM05D005696 ORTHO05D007099 5.5e-58 228.4 176 62.5
HanXRQChr07g0189921 Helianthus annuus HOM05D005696 ORTHO05D007099 9.4e-58 227.6 157 66.9
Glyma.19G194929 Glycine max HOM05D005696 ORTHO05D007099 2.1e-57 226.5 173 61.8
TWI77G0870 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 2.1e-57 226.5 146 69.2
TAR374G1347 Trochodendron aralioides HOM05D005696 ORTHO05D007099 3.6e-57 225.7 147 70.1
MBI04_g14262_MAGBIO Magnolia biondii HOM05D005696 ORTHO05D007099 4.7e-57 225.3 143 72.7
AT5G15770 Arabidopsis thaliana HOM05D005696 ORTHO05D007099 1.4e-56 223.8 146 68.5
MD14G1023000 Malus domestica HOM05D005696 ORTHO05D007099 1.4e-56 223.8 150 68.7
RcHm_v2.0_Chr3g0473671 Rosa chinensis HOM05D005696 ORTHO05D007099 1.4e-56 223.8 153 68.0
AL6G26610 Arabidopsis lyrata HOM05D005696 ORTHO05D007099 1.8e-56 223.4 148 67.6
Glyma.03G195900 Glycine max HOM05D005696 ORTHO05D007099 1.8e-56 223.4 148 66.2
DCAR_007752 Daucus carota HOM05D005696 ORTHO05D007099 2.3e-56 223.0 149 67.1
VMungo1383G2828 Vigna mungo HOM05D005696 ORTHO05D007099 2.3e-56 223.0 150 66.7
BolC9t58974H Brassica oleracea HOM05D005696 ORTHO05D007099 8.8e-56 221.1 157 64.3
FvH4_6g18700 Fragaria vesca HOM05D005696 ORTHO05D007099 8.8e-56 221.1 153 66.7
Carub.0006s1392 Capsella rubella HOM05D005696 ORTHO05D007099 1.5e-55 220.3 146 67.1
Aqoxy2G01202 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 2.0e-55 219.9 148 66.9
BraA02t05292Z Brassica rapa HOM05D005696 ORTHO05D007099 2.6e-55 219.5 148 66.2
CARHR197560 Cardamine hirsuta HOM05D005696 ORTHO05D007099 2.6e-55 219.5 146 67.1
Cpa.g.sc5.19 Carica papaya HOM05D005696 ORTHO05D007099 2.6e-55 219.5 152 65.8
Thhalv10014892m.g Eutrema salsugineum HOM05D005696 ORTHO05D007099 2.6e-55 219.5 148 66.2
Aa31LG11G13810 Aethionema arabicum HOM05D005696 ORTHO05D007099 3.4e-55 219.2 163 63.2
C09p61330 Brassica napus HOM05D005696 ORTHO05D007099 3.4e-55 219.2 157 63.7
FAN14G5868 Fragaria x ananassa HOM05D005696 ORTHO05D007099 3.4e-55 219.2 153 66.7
Sp6g28350 Schrenkiella parvula HOM05D005696 ORTHO05D007099 7.5e-55 218.0 148 64.9
FAN05G4755 Fragaria x ananassa HOM05D005696 ORTHO05D007099 1.3e-54 217.2 153 65.4
A10p23260 Brassica napus HOM05D005696 ORTHO05D007099 1.7e-54 216.9 157 61.8
BraA10t44394Z Brassica rapa HOM05D005696 ORTHO05D007099 2.2e-54 216.5 157 61.8
CiPaw.10G009800 Carya illinoinensis HOM05D005696 ORTHO05D007099 2.2e-54 216.5 148 69.6
Phvul.001G189800 Phaseolus vulgaris HOM05D005696 ORTHO05D007099 2.2e-54 216.5 148 65.5
C02p07960 Brassica napus HOM05D005696 ORTHO05D007099 1.8e-53 213.4 148 64.2
BcaNung02203 Brassica carinata HOM05D005696 ORTHO05D007099 7.0e-53 211.5 148 63.5
A02p03210 Brassica napus HOM05D005696 ORTHO05D007099 7.0e-53 211.5 148 63.5
Prupe.7G110200 Prunus persica HOM05D005696 ORTHO05D007099 7.0e-53 211.5 146 65.8
BcaC03g18448 Brassica carinata HOM05D005696 ORTHO05D007099 3.5e-52 209.1 148 62.8
BolC2t06719H Brassica oleracea HOM05D005696 ORTHO05D007099 3.5e-52 209.1 148 62.8
ATR0618G201 Amborella trichopoda HOM05D005696 ORTHO05D007099 2.9e-51 206.1 146 67.1
Dinv31687 Davidia involucrata HOM05D005696 ORTHO05D010438 4.7e-49 198.7 127 73.2
PSO339G3505 Papaver somniferum HOM05D005696 ORTHO05D007099 4.7e-49 198.7 148 60.1
SHI28289 Sapria himalayana HOM05D005696 ORTHO05D007099 4.7e-49 198.7 142 64.1
SEGI_17930 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 8.0e-49 198.0 151 58.9
PSO384G1553 Papaver somniferum HOM05D005696 ORTHO05D007099 1.0e-48 197.6 148 60.8
HPP92_015765 Vanilla planifolia HOM05D005696 ORTHO05D007099 4.0e-48 195.7 147 61.9
BcaC04g18939 Brassica carinata HOM05D005696 ORTHO05D007099 5.2e-48 195.3 157 59.2
ATR0605G169 Amborella trichopoda HOM05D005696 ORTHO05D007099 6.3e-46 188.3 145 60.7
Peaxi162Scf00006g00016 Petunia axillaris HOM05D005696 ORTHO05D007099 1.1e-45 187.6 122 70.5
Migut.C00979 Erythranthe guttata HOM05D005696 ORTHO05D007099 1.0e-40 171.0 99 80.8
AagrBONN_evm.TU.Sc2ySwM_344.341 Anthoceros agrestis HOM05D005696 ORTHO05D007099 1.8e-40 170.2 150 50.7
SMO364G0918 Selaginella moellendorffii HOM05D005696 ORTHO05D007099 4.4e-39 165.6 131 54.2
Os09g0488000 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 5.8e-39 165.2 148 48.6
Mapoly0046s0019 Marchantia polymorpha HOM05D005696 ORTHO05D007099 7.5e-39 164.9 164 49.4
Zm00001eb189250 Zea mays HOM05D005696 ORTHO05D007099 9.8e-39 164.5 148 52.7
FAN09G4491 Fragaria x ananassa HOM05D005696 ORTHO05D007099 3.7e-38 162.5 122 61.5
Os02g0717700 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 1.6e-36 157.1 155 50.3
Peaxi162Scf00068g02511 Petunia axillaris HOM05D005696 ORTHO05D007099 7.8e-36 154.8 106 66.0
Aqoxy5G03051 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 4.0e-32 142.5 100 63.0
MCO13G065 Micromonas commoda HOM05D005696 ORTHO05D007099 1.2e-31 141.0 143 49.7
VMungo0540G0323 Vigna mungo HOM05D005696 ORTHO05D007099 1.2e-31 141.0 133 54.1
PRCOL_00001568 Prasinoderma coloniale HOM05D005696 ORTHO05D007099 9.8e-31 137.9 148 48.6
Cre12.g560200 Chlamydomonas reinhardtii HOM05D005696 ORTHO05D007099 2.2e-30 136.7 145 50.3
SEGI_26718 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 1.9e-29 133.7 100 61.0
CBR_g37710 Chara braunii HOM05D005696 ORTHO05D007099 1.2e-23 114.4 152 38.2
VMungo1383G2413 Vigna mungo HOM05D005696 ORTHO05D007099 8.3e-22 108.2 148 41.9
Pp3c14_20090 Physcomitrium patens HOM05D005696 ORTHO05D007099 1.1e-21 107.8 85 55.3
AagrBONN_evm.TU.Sc2ySwM_362.2223 Anthoceros agrestis HOM05D005696 ORTHO05D007099 1.3e-19 100.9 84 53.6
MD12G1036200 Malus domestica HOM05D005696 ORTHO05D007099 3.0e-19 99.8 78 57.7
SGA_v2.0_scaffold152G36838 Striga asiatica HOM05D005696 ORTHO05D404065 1.7e-06 57.4 36 77.8


User provided reference genes

Program Settings