Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold74G24724 Striga asiatica HOM05D011217 ORTHO05D013910 9.5e-164 580.1 291 100.0
SGA_v2.0_scaffold74G24728 Striga asiatica HOM05D011217 ORTHO05D013910 1.1e-108 397.1 307 71.3
SGA_v2.0_scaffold260G45875 Striga asiatica HOM05D011217 ORTHO05D013910 1.5e-97 360.1 372 57.5
SGA_v2.0_scaffold109G31168 Striga asiatica HOM05D011217 ORTHO05D013910 4.0e-29 132.9 173 45.7
SGA_v2.0_scaffold44G16775 Striga asiatica HOM05D011217 ORTHO05D013910 2.9e-19 100.1 190 36.3
SGA_v2.0_scaffold225G43046 Striga asiatica HOM05D011217 ORTHO05D013910 6.7e-16 89.0 258 30.2
CiPaw.15G145500 Carya illinoinensis HOM05D000665 ORTHO05D000140 1.2e-09 68.2 137 27.7
PSO541G4041 Papaver somniferum HOM05D000665 ORTHO05D000140 1.2e-09 68.2 141 27.7
Dinv02799 Davidia involucrata HOM05D000665 ORTHO05D000921 3.5e-09 66.6 237 27.8
Dinv39109 Davidia involucrata HOM05D000665 ORTHO05D000921 3.5e-09 66.6 148 28.4
Dinv43770 Davidia involucrata HOM05D000665 ORTHO05D000921 1.8e-08 64.3 208 26.9
Dinv15874 Davidia involucrata HOM05D000665 ORTHO05D000921 2.3e-08 63.9 183 27.3
SGA_v2.0_scaffold37G14639 Striga asiatica HOM05D011217 ORTHO05D013910 3.9e-08 63.2 108 34.3
SGA_v2.0_scaffold90G27784 Striga asiatica HOM05D002693 ORTHO05D008074 3.9e-08 63.2 108 34.3
PSO223G0043 Papaver somniferum HOM05D000665 ORTHO05D000140 5.1e-08 62.8 126 27.8
PSO782G1930 Papaver somniferum HOM05D000665 ORTHO05D000140 5.1e-08 62.8 126 27.8
Atru.chr5.1075 Acer truncatum HOM05D000665 ORTHO05D000140 5.7e-07 59.3 129 25.6
Dinv29901 Davidia involucrata HOM05D007209 ORTHO05D000921 5.7e-07 59.3 155 31.6
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 5.7e-07 59.3 65 38.5
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 5.7e-07 59.3 65 38.5
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 5.7e-07 59.3 151 28.5
Dinv07014 Davidia involucrata HOM05D000665 ORTHO05D000921 9.6e-07 58.5 137 27.7
QL03p004820 Quercus lobata HOM05D000665 ORTHO05D000140 9.6e-07 58.5 119 26.9
CSS0030989 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000140 1.3e-06 58.2 138 26.8
Dinv17018 Davidia involucrata HOM05D007209 ORTHO05D000921 1.3e-06 58.2 161 31.1
Dinv42966 Davidia involucrata HOM05D007209 ORTHO05D000921 1.3e-06 58.2 161 31.1
Dinv43133 Davidia involucrata HOM05D007209 ORTHO05D000921 1.3e-06 58.2 161 31.1
Lj5g0019690 Lotus japonicus HOM05D000665 ORTHO05D000140 1.6e-06 57.8 121 27.3
Aqoxy2G02851 Aquilegia oxysepala HOM05D000665 ORTHO05D000140 2.1e-06 57.4 128 25.8
Actinidia25828 Actinidia chinensis HOM05D000665 ORTHO05D000140 2.8e-06 57.0 181 26.5
PSO832G2613 Papaver somniferum HOM05D003171 ORTHO05D000921 3.7e-06 56.6 65 36.9
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 3.7e-06 56.6 149 27.5
RcHm_v2.0_Chr6g0302651 Rosa chinensis HOM05D000665 ORTHO05D000140 3.7e-06 56.6 146 23.3
TAR381G0952 Trochodendron aralioides HOM05D000665 ORTHO05D003147 3.7e-06 56.6 139 25.9
FvH4_2g38660 Fragaria vesca HOM05D000665 ORTHO05D000140 4.8e-06 56.2 144 22.9
FAN27G2099 Fragaria x ananassa HOM05D000665 ORTHO05D000140 6.2e-06 55.8 136 23.5
HanXRQChr10g0285541 Helianthus annuus HOM05D000665 ORTHO05D000140 6.2e-06 55.8 120 27.5
PSO782G0347 Papaver somniferum HOM05D000665 ORTHO05D000140 6.2e-06 55.8 132 26.5
PGR102G2952 Punica granatum HOM05D000034 ORTHO05D000277 6.2e-06 55.8 115 27.8
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 6.2e-06 55.8 135 25.9
PSO170G6184 Papaver somniferum HOM05D000665 ORTHO05D000140 8.2e-06 55.5 133 27.8
Prupe.6G328700 Prunus persica HOM05D000665 ORTHO05D000140 8.2e-06 55.5 119 23.5
PGR044G2465 Punica granatum HOM05D000034 ORTHO05D000277 8.2e-06 55.5 124 27.4
SGA_v2.0_scaffold21G09417 Striga asiatica HOM05D011217 ORTHO05D013910 8.2e-06 55.5 58 36.2
TAR383G0921 Trochodendron aralioides HOM05D000665 ORTHO05D000140 8.2e-06 55.5 131 24.4


User provided reference genes

Program Settings