Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold74G24716 Striga asiatica HOM05D008413 ORTHO05D000401 8.3e-144 513.8 287 100.0
SGA_v2.0_scaffold176G39371 Striga asiatica HOM05D008413 ORTHO05D000401 6.8e-106 387.9 299 77.3
SGA_v2.0_scaffold284G47013 Striga asiatica HOM05D008413 ORTHO05D000401 6.2e-99 364.8 287 69.7
SGA_v2.0_scaffold38G15030 Striga asiatica HOM05D008413 ORTHO05D000401 8.1e-91 337.8 278 67.6
SGA_v2.0_scaffold6G03317 Striga asiatica HOM05D008413 ORTHO05D000401 2.0e-44 183.7 296 43.2
SGA_v2.0_scaffold28G12014 Striga asiatica HOM05D008413 ORTHO05D000401 1.0e-37 161.4 273 42.9
Atru.chr1.1934 Acer truncatum HOM05D008413 ORTHO05D000401 5.9e-33 145.6 266 45.1
SGA_v2.0_scaffold234G43617 Striga asiatica HOM05D008413 ORTHO05D000401 5.5e-31 139.0 271 33.9
Atru.chr1.2141 Acer truncatum HOM05D008413 ORTHO05D000401 9.4e-31 138.3 266 41.7
PSO675G5967 Papaver somniferum HOM05D008413 ORTHO05D000401 1.4e-26 124.4 268 35.4
PSO541G5389 Papaver somniferum HOM05D008413 ORTHO05D000401 1.8e-26 124.0 268 35.4
SGA_v2.0_scaffold85G26643 Striga asiatica HOM05D008413 ORTHO05D000401 1.8e-26 124.0 288 32.3
PSO478G0274 Papaver somniferum HOM05D008413 ORTHO05D000401 5.4e-26 122.5 268 34.7
SGA_v2.0_scaffold208G41998 Striga asiatica HOM05D008413 ORTHO05D000401 7.0e-26 122.1 278 33.8
SGA_v2.0_scaffold218G42484 Striga asiatica HOM05D008413 ORTHO05D000401 1.2e-25 121.3 276 33.7
SGA_v2.0_scaffold90G27840 Striga asiatica HOM05D008413 ORTHO05D000401 1.0e-24 118.2 277 38.3
SGA_v2.0_scaffold61G21156 Striga asiatica HOM05D008413 ORTHO05D000401 5.0e-24 115.9 286 32.2
SGA_v2.0_scaffold119G32741 Striga asiatica HOM05D008413 ORTHO05D000401 8.6e-24 115.2 277 36.1
PSO591G0033 Papaver somniferum HOM05D008413 ORTHO05D000401 1.5e-23 114.4 280 29.6
SGA_v2.0_scaffold279G46812 Striga asiatica HOM05D000807 ORTHO05D022896 9.5e-23 111.7 71 77.5
SGA_v2.0_scaffold368G50078 Striga asiatica HOM05D008413 ORTHO05D000401 9.5e-23 111.7 277 36.5
SGA_v2.0_scaffold12G05983 Striga asiatica HOM05D008413 ORTHO05D000401 2.8e-22 110.2 169 38.5
PSO017G6541 Papaver somniferum HOM05D008413 ORTHO05D000401 1.8e-21 107.5 179 40.2
SGA_v2.0_scaffold177G39426 Striga asiatica HOM05D008413 ORTHO05D000401 3.4e-20 103.2 267 30.7
PSO063G5428 Papaver somniferum HOM05D008413 ORTHO05D000401 7.5e-20 102.1 265 34.3
SGA_v2.0_scaffold231G43417 Striga asiatica HOM05D008413 ORTHO05D000401 2.8e-19 100.1 48 95.8
PSO063G1996 Papaver somniferum HOM05D008413 ORTHO05D000401 3.7e-19 99.8 274 34.7
SGA_v2.0_scaffold50G18468 Striga asiatica HOM05D008413 ORTHO05D000401 4.9e-19 99.4 218 32.1
PSO384G2190 Papaver somniferum HOM05D008413 ORTHO05D000401 8.3e-19 98.6 266 32.3
SGA_v2.0_scaffold17G08026 Striga asiatica HOM05D008413 ORTHO05D000401 1.1e-18 98.2 181 35.9
SGA_v2.0_scaffold4G02509 Striga asiatica HOM05D008413 ORTHO05D000401 3.5e-17 93.2 168 33.9
PSO541G0947 Papaver somniferum HOM05D008413 ORTHO05D000401 7.8e-17 92.0 163 39.9
SGA_v2.0_scaffold84G26501 Striga asiatica HOM05D008413 ORTHO05D000401 1.7e-16 90.9 192 35.4
SGA_v2.0_scaffold90G27895 Striga asiatica HOM05D008413 ORTHO05D000401 2.5e-15 87.0 150 36.7
SGA_v2.0_scaffold323G48638 Striga asiatica HOM05D008413 ORTHO05D000401 2.8e-14 83.6 185 31.9
SGA_v2.0_scaffold169G38717 Striga asiatica HOM05D008413 ORTHO05D000401 1.4e-13 81.3 277 27.8
PSO782G4524 Papaver somniferum HOM05D008413 ORTHO05D000401 3.1e-13 80.1 190 28.9
SGA_v2.0_scaffold55G19853 Striga asiatica HOM05D008413 ORTHO05D000401 6.8e-13 79.0 159 34.0
Rhsim09G0056800 Rhododendron simsii HOM05D001576 ORTHO05D010219 3.7e-11 73.2 147 35.4
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 4.9e-11 72.8 251 27.5
BcaC06g34273 Brassica carinata HOM05D000589 ORTHO05D000401 1.4e-10 71.2 157 31.2
CiPaw.03G129800 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.0e-10 68.9 169 30.8
Haze_17766 Corylus avellana HOM05D001576 ORTHO05D000401 9.2e-10 68.6 167 30.5
QL10p048988 Quercus lobata HOM05D001576 ORTHO05D000401 1.6e-09 67.8 206 27.7
QL03p071586 Quercus lobata HOM05D001576 ORTHO05D000401 2.0e-09 67.4 169 32.0
TWI23G0314 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.0e-09 67.4 170 31.2
CANSAT01G3197 Cannabis sativa HOM05D001576 ORTHO05D010219 6.0e-09 65.9 168 29.8
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 7.8e-09 65.5 175 29.1
PSO339G5332 Papaver somniferum HOM05D008413 ORTHO05D000401 1.0e-08 65.1 253 26.1
TWI73G0420 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.0e-08 65.1 160 33.8
CiPaw.15G037700 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.3e-08 64.7 136 35.3
C09p61020 Brassica napus HOM05D000589 ORTHO05D000401 2.3e-08 63.9 157 33.1
CSS0009093 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.0e-08 63.5 249 31.7
CSS0039293 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.0e-08 63.5 249 31.7
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.0e-08 63.5 143 33.6
CiPaw.08G134700 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.0e-08 63.5 143 33.6
CiPaw.08G157400 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.0e-08 63.5 143 33.6
CSS0006274 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.9e-08 63.2 247 30.4
QL03p006855 Quercus lobata HOM05D001576 ORTHO05D000401 3.9e-08 63.2 136 32.4
QL06p039590 Quercus lobata HOM05D001576 ORTHO05D000401 3.9e-08 63.2 136 32.4
AL8G21500 Arabidopsis lyrata HOM05D000589 ORTHO05D000401 5.0e-08 62.8 157 30.6
BcaC09g48715 Brassica carinata HOM05D000589 ORTHO05D000401 5.0e-08 62.8 162 29.0
BolC2t11689H Brassica oleracea HOM05D000589 ORTHO05D000401 5.0e-08 62.8 164 29.9
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 5.0e-08 62.8 194 30.4
CSS0000195 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.6e-08 62.0 247 29.6
CSS0003077 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.6e-08 62.0 247 29.6
CSS0019281 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.6e-08 62.0 247 29.6
CSS0021750 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.6e-08 62.0 247 29.6
CSS0042573 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.6e-08 62.0 247 29.6
SGA_v2.0_scaffold260G45865 Striga asiatica HOM05D001576 ORTHO05D000401 8.6e-08 62.0 251 24.3
Hma1.2p1_1313F.1_g274940 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 1.1e-07 61.6 163 31.3
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.1e-07 61.6 194 29.4
SGA_v2.0_scaffold309G48177 Striga asiatica HOM05D001576 ORTHO05D000401 1.5e-07 61.2 252 23.8
AL5G28650 Arabidopsis lyrata HOM05D000589 ORTHO05D000401 2.5e-07 60.5 163 29.4
AL6G29040 Arabidopsis lyrata HOM05D000589 ORTHO05D000401 2.5e-07 60.5 163 29.4
CSS0042927 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.5e-07 60.5 244 29.5
Haze_20229 Corylus avellana HOM05D001576 ORTHO05D000401 2.5e-07 60.5 147 31.3
Rhsim03G0135600 Rhododendron simsii HOM05D001576 ORTHO05D010219 2.5e-07 60.5 254 26.8
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 4.3e-07 59.7 258 26.4
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 4.3e-07 59.7 258 26.4
SHI25538 Sapria himalayana HOM05D002460 ORTHO05D002716 4.3e-07 59.7 129 32.6
BolC1t02127H Brassica oleracea HOM05D000589 ORTHO05D000401 5.6e-07 59.3 193 28.0
Potri.010G014250 Populus trichocarpa HOM05D001576 ORTHO05D010219 5.6e-07 59.3 71 39.4
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 5.6e-07 59.3 258 26.4
CSS0031528 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.3e-07 58.9 77 40.3
SGA_v2.0_scaffold241G44187 Striga asiatica HOM05D008413 ORTHO05D000401 7.3e-07 58.9 175 33.1
QL09p033218 Quercus lobata HOM05D001576 ORTHO05D000401 9.5e-07 58.5 128 32.8
SGA_v2.0_scaffold22G09929 Striga asiatica HOM05D008413 ORTHO05D000401 9.5e-07 58.5 273 25.6
CSS0004943 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-06 58.2 77 41.6
CiPaw.09G174900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-06 58.2 253 30.4
TWI12G0266 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.2e-06 58.2 185 30.3
CiPaw.15G050900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.6e-06 57.8 130 33.8
QL04p000022 Quercus lobata HOM05D001576 ORTHO05D000401 1.6e-06 57.8 158 29.7
Rhsim03G0149900 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.6e-06 57.8 92 38.0
TWI31G0938 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.6e-06 57.8 185 29.2
Zm00001eb138070 Zea mays HOM05D001576 ORTHO05D000401 1.6e-06 57.8 252 23.4
BolC7t42127H Brassica oleracea HOM05D000589 ORTHO05D000401 2.8e-06 57.0 188 26.1
CSS0047725 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.8e-06 57.0 74 41.9
CSS0035632 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.6e-06 56.6 70 42.9
BcaC01g01358 Brassica carinata HOM05D000589 ORTHO05D000401 4.7e-06 56.2 179 27.9
BolC4t27712H Brassica oleracea HOM05D000589 ORTHO05D000401 4.7e-06 56.2 154 26.0
BolC2t11324H Brassica oleracea HOM05D000589 ORTHO05D000401 6.2e-06 55.8 189 26.5
CiPaw.01G121200 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.2e-06 55.8 138 33.3
CiPaw.02G050500 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.2e-06 55.8 259 26.3
FvH4_6g21610 Fragaria vesca HOM05D004516 ORTHO05D005194 6.2e-06 55.8 132 28.8
Hma1.2p1_0921F.1_g236870 Hydrangea macrophylla HOM05D001576 ORTHO05D010219 6.2e-06 55.8 204 27.5
Rhsim01G0041500 Rhododendron simsii HOM05D001576 ORTHO05D000401 6.2e-06 55.8 107 33.6
SGA_v2.0_scaffold19G08596 Striga asiatica HOM05D008413 ORTHO05D000401 6.2e-06 55.8 95 34.7
BolC5t30732H Brassica oleracea HOM05D000589 ORTHO05D005968 8.0e-06 55.5 181 27.6
BolC9t55279H Brassica oleracea HOM05D000589 ORTHO05D000401 8.0e-06 55.5 90 33.3
CiPaw.14G029000 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.0e-06 55.5 272 31.6
QL04p003192 Quercus lobata HOM05D001576 ORTHO05D000401 8.0e-06 55.5 158 29.1
QL09p040841 Quercus lobata HOM05D001576 ORTHO05D000401 8.0e-06 55.5 195 27.2


User provided reference genes

Program Settings