Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold74G24670 Striga asiatica HOM05D057809 ORTHO05D402664 5.2e-63 244.2 123 100.0
SGA_v2.0_scaffold150G36653 Striga asiatica HOM05D057809 ORTHO05D400848 9.9e-38 160.2 111 75.7
SGA_v2.0_scaffold104G30109 Striga asiatica HOM05D000146 ORTHO05D002262 2.2e-24 115.9 84 70.2
SalBow3G2698 Salvia bowleyana HOM05D000146 ORTHO05D002262 5.7e-17 91.3 84 61.9
MSTRG.12623 Avicennia marina HOM05D000146 ORTHO05D002262 5.5e-12 74.7 85 57.6
AL5G24480 Arabidopsis lyrata HOM05D000146 ORTHO05D002262 1.3e-08 63.5 84 47.6
AT3G45780 Arabidopsis thaliana HOM05D000146 ORTHO05D002262 1.3e-08 63.5 84 47.6
Carub.0005s1164 Capsella rubella HOM05D000146 ORTHO05D002262 1.7e-08 63.2 84 47.6
Aa31LG4G15020 Aethionema arabicum HOM05D000146 ORTHO05D002262 4.8e-08 61.6 84 47.6
CARHR149890 Cardamine hirsuta HOM05D000146 ORTHO05D002262 5.3e-07 58.2 84 45.2
Sp5g15740 Schrenkiella parvula HOM05D000146 ORTHO05D002262 5.3e-07 58.2 84 46.4
SpUn0096_0010 Schrenkiella parvula HOM05D000146 ORTHO05D002262 5.3e-07 58.2 84 46.4
A06p26920 Brassica napus HOM05D000146 ORTHO05D002262 7.0e-07 57.8 84 46.4
BraA06t25631Z Brassica rapa HOM05D000146 ORTHO05D002262 9.1e-07 57.4 84 46.4
Thhalv10002386m.g Eutrema salsugineum HOM05D000146 ORTHO05D002262 9.1e-07 57.4 84 45.2
unitig_0.g1031 Utricularia gibba HOM05D000146 ORTHO05D002262 1.2e-06 57.0 84 46.4
BcaC01g02273 Brassica carinata HOM05D000146 ORTHO05D002262 2.0e-06 56.2 84 45.2
C03p67140 Brassica napus HOM05D000146 ORTHO05D002262 2.0e-06 56.2 84 45.2
BolC3t18995H Brassica oleracea HOM05D000146 ORTHO05D002262 2.0e-06 56.2 84 45.2
Solyc11g072710.3 Solanum lycopersicum HOM05D000146 ORTHO05D002262 5.9e-06 54.7 90 45.6
Sopen11g030380 Solanum pennellii HOM05D000146 ORTHO05D002262 5.9e-06 54.7 90 45.6
TWI75G1332 Tripterygium wilfordii HOM05D000146 ORTHO05D002262 5.9e-06 54.7 88 47.7
GSVIVG01025082001 Vitis vinifera HOM05D000146 ORTHO05D002262 5.9e-06 54.7 86 46.5


User provided reference genes

Program Settings