Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold74G24650 Striga asiatica HOM05D002266 ORTHO05D010337 1.3e-222 776.2 403 100.0
Migut.D01181 Erythranthe guttata HOM05D002266 ORTHO05D010337 1.0e-131 474.2 402 64.2
SalBow1G8312 Salvia bowleyana HOM05D002266 ORTHO05D010337 6.9e-96 355.1 401 51.6
Hma1.2p1_0452F.1_g155980 Hydrangea macrophylla HOM05D002266 ORTHO05D010337 6.3e-89 332.0 414 46.9
Rhsim08G0198000 Rhododendron simsii HOM05D002266 ORTHO05D010337 1.3e-86 324.3 449 44.8
Lj5C86T8 Lonicera japonica HOM05D002266 ORTHO05D010337 4.6e-84 315.8 414 45.7
Cc04_g05840 Coffea canephora HOM05D002266 ORTHO05D010337 1.0e-83 314.7 425 46.4
unitig_747.g21318 Utricularia gibba HOM05D002266 ORTHO05D010337 1.8e-80 303.9 382 46.3
DCAR_025647 Daucus carota HOM05D002266 ORTHO05D010337 3.6e-76 289.7 409 43.8
Oeu013660.2 Olea europaea HOM05D002266 ORTHO05D010337 3.9e-75 286.2 337 50.1
Ciclev10033782m.g Citrus clementina HOM05D002266 ORTHO05D010337 9.1e-72 275.0 404 42.6
TWI23G1291 Tripterygium wilfordii HOM05D002266 ORTHO05D010337 1.2e-71 274.6 421 40.6
Nitab4.5_0002584g0010 Nicotiana tabacum HOM05D002266 ORTHO05D010337 3.4e-71 273.1 406 42.4
HanXRQChr05g0155381 Helianthus annuus HOM05D002266 ORTHO05D010337 3.8e-70 269.6 415 39.3
Nitab4.5_0008403g0020 Nicotiana tabacum HOM05D002266 ORTHO05D010337 6.5e-70 268.9 401 41.4
Manes.14G044300 Manihot esculenta HOM05D002266 ORTHO05D010337 4.2e-69 266.2 402 39.8
Duzib205G1981 Durio zibethinus HOM05D002266 ORTHO05D010337 1.2e-68 264.6 424 40.1
Peaxi162Scf00135g01413 Petunia axillaris HOM05D002266 ORTHO05D010337 1.2e-68 264.6 428 40.0
Solyc12g042340.2 Solanum lycopersicum HOM05D002266 ORTHO05D010337 2.1e-68 263.8 416 41.1
Atru.chr6.1922 Acer truncatum HOM05D002266 ORTHO05D010337 2.7e-68 263.5 432 40.0
Atru.chr6.1924 Acer truncatum HOM05D002266 ORTHO05D010337 2.7e-68 263.5 432 40.0
Sopen12g021270 Solanum pennellii HOM05D002266 ORTHO05D010337 4.7e-68 262.7 377 41.4
Potri.012G108900 Populus trichocarpa HOM05D002266 ORTHO05D010337 6.1e-68 262.3 385 41.0
QL10p000420 Quercus lobata HOM05D002266 ORTHO05D010337 3.9e-67 259.6 395 40.3
Prupe.5G140800 Prunus persica HOM05D002266 ORTHO05D010337 5.2e-67 259.2 409 40.3
Gohir.D07G050900 Gossypium hirsutum HOM05D002266 ORTHO05D010337 8.8e-67 258.5 414 37.9
Gohir.A07G046600 Gossypium hirsutum HOM05D002266 ORTHO05D010337 1.5e-66 257.7 414 37.9
Gorai.001G054000 Gossypium raimondii HOM05D002266 ORTHO05D010337 3.3e-66 256.5 414 37.7
Sabra12G0079800 Salix brachista HOM05D002266 ORTHO05D010337 1.4e-64 251.1 414 38.9
Lsat_1_v5_gn_5_10020 Lactuca sativa HOM05D002266 ORTHO05D010337 2.0e-63 247.3 419 38.4
Thecc.03G141000 Theobroma cacao HOM05D002266 ORTHO05D010337 4.5e-63 246.1 416 38.2
AT5G61865 Arabidopsis thaliana HOM05D002266 ORTHO05D010337 1.6e-60 237.7 394 37.6
Thhalv10005642m.g Eutrema salsugineum HOM05D002266 ORTHO05D010337 2.1e-60 237.3 397 37.0
RcHm_v2.0_Chr7g0188601 Rosa chinensis HOM05D002266 ORTHO05D010337 1.8e-59 234.2 404 40.3
AL8G38630 Arabidopsis lyrata HOM05D002266 ORTHO05D010337 5.2e-59 232.6 398 37.4
A06p28540 Brassica napus HOM05D002266 ORTHO05D010337 2.0e-58 230.7 410 36.3
C03p65250 Brassica napus HOM05D002266 ORTHO05D010337 2.0e-58 230.7 416 36.1
BolC3t18778H Brassica oleracea HOM05D002266 ORTHO05D010337 2.0e-58 230.7 416 36.1
BcaC01g02442 Brassica carinata HOM05D002266 ORTHO05D010337 2.6e-58 230.3 409 35.9
BraA06t25800Z Brassica rapa HOM05D002266 ORTHO05D010337 3.3e-58 229.9 407 36.4
Carub.0008s2256 Capsella rubella HOM05D002266 ORTHO05D010337 3.3e-58 229.9 398 36.7
BcaB02g09608 Brassica carinata HOM05D002266 ORTHO05D010337 4.4e-58 229.6 416 36.1
Aqoxy3G02681 Aquilegia oxysepala HOM05D002266 ORTHO05D010337 1.4e-56 224.6 431 36.0
CARHR275630 Cardamine hirsuta HOM05D002266 ORTHO05D010337 1.6e-55 221.1 397 35.3
FvH4_5g09640 Fragaria vesca HOM05D002266 ORTHO05D010337 2.7e-55 220.3 408 37.7
MD14G1146800 Malus domestica HOM05D002266 ORTHO05D010337 4.5e-55 219.5 371 39.4
FAN04G1258 Fragaria x ananassa HOM05D002266 ORTHO05D010337 1.7e-54 217.6 408 37.5
Sp2g25060 Schrenkiella parvula HOM05D002266 ORTHO05D010337 3.8e-54 216.5 416 35.1
Actinidia25516 Actinidia chinensis HOM05D002266 ORTHO05D010337 4.7e-52 209.5 285 41.1
THA.LOC104818284 Tarenaya hassleriana HOM05D002266 ORTHO05D010337 3.4e-50 203.4 349 36.7
COL.COLO4_37262 Corchorus olitorius HOM05D002266 ORTHO05D010337 1.3e-49 201.4 327 39.4
Dinv13716 Davidia involucrata HOM05D002266 ORTHO05D010337 6.5e-46 189.1 212 48.1
Aa31LG11G1630 Aethionema arabicum HOM05D002266 ORTHO05D010337 8.6e-46 188.7 388 33.2
FAN18G2616 Fragaria x ananassa HOM05D002266 ORTHO05D010337 3.3e-45 186.8 373 36.2
Cpa.g.sc13.178 Carica papaya HOM05D002266 ORTHO05D010337 4.2e-45 186.4 253 42.7
PSO339G3582 Papaver somniferum HOM05D002266 ORTHO05D010337 1.8e-43 181.0 431 33.4
PGSC0003DMG400014448 Solanum tuberosum HOM05D002266 ORTHO05D010337 9.8e-42 175.3 329 37.1
MBI07_g35979_MAGBIO Magnolia biondii HOM05D002266 ORTHO05D010337 3.7e-41 173.3 289 36.0
FAN13G2170 Fragaria x ananassa HOM05D002266 ORTHO05D010337 1.3e-38 164.9 376 34.8
FAN08G1259 Fragaria x ananassa HOM05D002266 ORTHO05D010337 3.7e-33 146.7 372 32.8
SEGI_02612 Sequoiadendron giganteum HOM05D002266 ORTHO05D000002 1.3e-14 85.1 355 24.8
Sabra13G0033600 Salix brachista HOM05D002266 ORTHO05D010337 7.6e-10 69.3 68 57.4
Actinidia18297 Actinidia chinensis HOM05D002266 ORTHO05D010337 3.0e-06 57.4 44 59.1


User provided reference genes

Program Settings