Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold74G24619 Striga asiatica HOM05D009933 ORTHO05D012084 6.5e-73 277.3 143 100.0
SGA_v2.0_scaffold74G24613 Striga asiatica HOM05D009933 ORTHO05D012084 2.4e-35 152.5 153 51.0
Migut.G00780 Erythranthe guttata HOM05D009933 ORTHO05D012084 6.8e-30 134.4 124 52.4
SalBow7G3223 Salvia bowleyana HOM05D009933 ORTHO05D012084 9.5e-24 114.0 129 46.5
SalBow7G3334 Salvia bowleyana HOM05D000059 ORTHO05D012084 9.5e-24 114.0 129 46.5
SGA_v2.0_scaffold74G24609 Striga asiatica HOM05D009933 ORTHO05D009712 8.9e-22 107.5 124 40.3
SalBow7G2832 Salvia bowleyana HOM05D009933 ORTHO05D012084 2.6e-21 105.9 133 42.9
unitig_60.g25616 Utricularia gibba HOM05D009933 ORTHO05D012084 6.4e-20 101.3 118 44.1
Migut.I00636 Erythranthe guttata HOM05D009933 ORTHO05D012084 4.6e-18 95.1 122 43.4
SGA_v2.0_scaffold74G24614 Striga asiatica HOM05D008339 ORTHO05D009712 4.6e-18 95.1 104 47.1
Oeu043379.1 Olea europaea HOM05D009933 ORTHO05D012084 3.1e-14 82.4 125 32.8
Oeu043429.1 Olea europaea HOM05D009933 ORTHO05D012084 2.0e-13 79.7 125 32.8
Peaxi162Scf01623g00014 Petunia axillaris HOM05D009933 ORTHO05D012084 3.4e-13 79.0 106 38.7
PGSC0003DMG400003969 Solanum tuberosum HOM05D009933 ORTHO05D012084 2.9e-12 75.9 131 30.5
Solyc11g005470.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 2.4e-11 72.8 131 29.0
Nitab4.5_0002441g0060 Nicotiana tabacum HOM05D009933 ORTHO05D012084 4.1e-11 72.0 112 32.1
Solyc08g016110.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 5.4e-11 71.6 131 29.8
Solyc08g016120.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 5.4e-11 71.6 131 29.8
Solyc08g016100.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 7.1e-11 71.2 131 29.8
CAN.G676.49 Capsicum annuum HOM05D009933 ORTHO05D012084 6.0e-10 68.2 124 32.3
PGSC0003DMG400038811 Solanum tuberosum HOM05D009933 ORTHO05D012084 6.0e-10 68.2 112 30.4
Solyc04g015510.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 3.9e-09 65.5 131 29.0
MD12G1203500 Malus domestica HOM05D008339 ORTHO05D009712 5.1e-09 65.1 122 32.8
PGSC0003DMG400003994 Solanum tuberosum HOM05D009933 ORTHO05D012084 8.6e-09 64.3 123 29.3
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 1.5e-08 63.5 130 26.9
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 4.3e-08 62.0 126 32.5
MELO3C031525.2 Cucumis melo HOM05D008339 ORTHO05D009712 5.6e-08 61.6 128 32.0
Peaxi162Scf01623g00015 Petunia axillaris HOM05D009933 ORTHO05D012084 5.6e-08 61.6 91 35.2
Gorai.007G298200 Gossypium raimondii HOM05D008339 ORTHO05D009712 3.6e-07 58.9 123 27.6
PGR004G1038 Punica granatum HOM05D008339 ORTHO05D009712 6.2e-07 58.2 127 30.7
Gohir.D11G276100 Gossypium hirsutum HOM05D008339 ORTHO05D009712 1.1e-06 57.4 123 26.8
Sabra05G0006500 Salix brachista HOM05D008339 ORTHO05D009712 2.4e-06 56.2 127 28.3
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 3.1e-06 55.8 127 28.3
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 5.2e-06 55.1 127 27.6
QL04p005649 Quercus lobata HOM05D003146 ORTHO05D001819 8.9e-06 54.3 104 28.8


User provided reference genes

Program Settings