Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold74G24614 Striga asiatica HOM05D008339 ORTHO05D009712 2.8e-103 378.6 191 100.0
SGA_v2.0_scaffold74G24613 Striga asiatica HOM05D009933 ORTHO05D012084 3.2e-51 205.7 127 79.5
SGA_v2.0_scaffold74G24609 Striga asiatica HOM05D009933 ORTHO05D009712 9.7e-32 141.0 120 52.5
SGA_v2.0_scaffold74G24619 Striga asiatica HOM05D009933 ORTHO05D012084 4.2e-19 99.0 104 47.1
SalBow7G2832 Salvia bowleyana HOM05D009933 ORTHO05D012084 4.7e-18 95.5 101 43.6
Migut.G00780 Erythranthe guttata HOM05D009933 ORTHO05D012084 1.8e-17 93.6 113 41.6
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 1.8e-17 93.6 119 41.2
SalBow7G3223 Salvia bowleyana HOM05D009933 ORTHO05D012084 3.0e-17 92.8 101 41.6
Oeu043379.1 Olea europaea HOM05D009933 ORTHO05D012084 5.2e-17 92.0 114 43.0
SalBow7G3334 Salvia bowleyana HOM05D000059 ORTHO05D012084 5.2e-17 92.0 118 37.3
Oeu043429.1 Olea europaea HOM05D009933 ORTHO05D012084 1.2e-16 90.9 115 43.5
MD12G1203500 Malus domestica HOM05D008339 ORTHO05D009712 1.4e-14 84.0 114 36.8
RcHm_v2.0_Chr3g0457691 Rosa chinensis HOM05D008339 ORTHO05D009712 2.4e-14 83.2 125 37.6
MD12G1203400 Malus domestica HOM05D008339 ORTHO05D009712 5.3e-14 82.0 114 34.2
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 7.0e-14 81.6 104 37.5
unitig_60.g25616 Utricularia gibba HOM05D009933 ORTHO05D012084 2.0e-13 80.1 113 35.4
MD12G1203300 Malus domestica HOM05D008339 ORTHO05D009712 7.7e-13 78.2 114 34.2
Sabra13G0004800 Salix brachista HOM05D008339 ORTHO05D009712 7.7e-13 78.2 161 33.5
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 1.0e-12 77.8 114 33.3
FAN02G4119 Fragaria x ananassa HOM05D008339 ORTHO05D009712 8.5e-12 74.7 114 34.2
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 1.9e-11 73.6 114 33.3
CANSAT54G0094 Cannabis sativa HOM05D008339 ORTHO05D009712 2.5e-11 73.2 102 41.2
AUR62000433 Chenopodium quinoa HOM05D000060 ORTHO05D004147 2.5e-11 73.2 101 36.6
FvH4_6g08020 Fragaria vesca HOM05D008339 ORTHO05D009712 3.2e-11 72.8 136 31.6
FAN14G1454 Fragaria x ananassa HOM05D008339 ORTHO05D009712 3.2e-11 72.8 136 31.6
FAN05G1492 Fragaria x ananassa HOM05D008339 ORTHO05D009712 4.2e-11 72.4 124 31.5
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 4.2e-11 72.4 149 31.5
Ah.06g196240 Amaranthus hybridus HOM05D008339 ORTHO05D009712 5.5e-11 72.0 140 33.6
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 5.5e-11 72.0 117 34.2
FvH4_6g07980 Fragaria vesca HOM05D008339 ORTHO05D009712 2.1e-10 70.1 118 32.2
FAN14G5780 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.1e-10 70.1 118 32.2
CANSAT54G1683 Cannabis sativa HOM05D008339 ORTHO05D009712 2.7e-10 69.7 102 40.2
AT1G09360 Arabidopsis thaliana HOM05D013394 ORTHO05D009712 4.7e-10 68.9 118 26.3
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 4.7e-10 68.9 101 35.6
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 6.1e-10 68.6 134 28.4
Haze_08675 Corylus avellana HOM05D008339 ORTHO05D009712 6.1e-10 68.6 120 35.8
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 8.0e-10 68.2 119 36.1
PGR031G3971 Punica granatum HOM05D008339 ORTHO05D009712 8.0e-10 68.2 119 31.1
PGR004G1038 Punica granatum HOM05D008339 ORTHO05D009712 1.4e-09 67.4 151 32.5
Cpa.g.sc48.196 Carica papaya HOM05D008339 ORTHO05D009712 4.0e-09 65.9 100 36.0
Haze_04054 Corylus avellana HOM05D008339 ORTHO05D009712 4.0e-09 65.9 118 32.2
Eucgr.E00366 Eucalyptus grandis HOM05D008339 ORTHO05D009712 4.0e-09 65.9 118 32.2
TWI12G1182 Tripterygium wilfordii HOM05D008339 ORTHO05D009712 6.8e-09 65.1 118 30.5
FAN05G4801 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.6e-08 63.2 94 31.9
Thecc.05G309700 Theobroma cacao HOM05D008339 ORTHO05D009712 3.4e-08 62.8 118 30.5
Migut.I00636 Erythranthe guttata HOM05D009933 ORTHO05D012084 9.8e-08 61.2 120 28.3
FAN02G0526 Fragaria x ananassa HOM05D000010 ORTHO05D004316 9.8e-08 61.2 76 40.8
Oeu060879.1 Olea europaea HOM05D009933 ORTHO05D012084 9.8e-08 61.2 117 35.0
Thhalv10009592m.g Eutrema salsugineum HOM05D013394 ORTHO05D009712 1.3e-07 60.8 116 27.6
PGR031G3403 Punica granatum HOM05D008339 ORTHO05D009712 2.2e-07 60.1 86 34.9
Peaxi162Scf01623g00014 Petunia axillaris HOM05D009933 ORTHO05D012084 3.7e-07 59.3 118 29.7
MELO3C031525.2 Cucumis melo HOM05D008339 ORTHO05D009712 4.8e-07 58.9 104 28.8
PGR031G2810 Punica granatum HOM05D008339 ORTHO05D009712 4.8e-07 58.9 97 34.0
Haze_01333 Corylus avellana HOM05D001578 ORTHO05D001207 6.3e-07 58.5 133 32.3
Haze_01338 Corylus avellana HOM05D001578 ORTHO05D001207 6.3e-07 58.5 133 32.3
Sp1g07970 Schrenkiella parvula HOM05D013394 ORTHO05D009712 6.3e-07 58.5 116 25.9
Prupe.6G309200 Prunus persica HOM05D008339 ORTHO05D009712 8.3e-07 58.2 124 29.0
ClCG02G014750 Citrullus lanatus HOM05D008339 ORTHO05D013640 1.1e-06 57.8 115 32.2
Atru.chr4.3056 Acer truncatum HOM05D001578 ORTHO05D001207 1.4e-06 57.4 167 26.9
Psat4g021720 Pisum sativum HOM05D001578 ORTHO05D001207 1.4e-06 57.4 81 32.1
TWI75G0074 Tripterygium wilfordii HOM05D001578 ORTHO05D001207 1.4e-06 57.4 145 29.0
TPR.G33864 Trifolium pratense HOM05D001578 ORTHO05D001207 2.4e-06 56.6 117 28.2
TAR362G0027 Trochodendron aralioides HOM05D008339 ORTHO05D009712 2.4e-06 56.6 119 28.6
CARHR178500 Cardamine hirsuta HOM05D013394 ORTHO05D009712 4.1e-06 55.8 116 23.3
Glyma.09G033700 Glycine max HOM05D001578 ORTHO05D001207 4.1e-06 55.8 130 27.7
Glyma.15G138400 Glycine max HOM05D001578 ORTHO05D001207 4.1e-06 55.8 100 29.0
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 4.1e-06 55.8 97 27.8
Medtr4g122720 Medicago truncatula HOM05D001578 ORTHO05D001207 5.4e-06 55.5 80 30.0
Lj6g0003953 Lotus japonicus HOM05D001578 ORTHO05D001207 7.0e-06 55.1 97 26.8
Solyc11g005470.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 7.0e-06 55.1 121 30.6
Medtr2g033630 Medicago truncatula HOM05D001578 ORTHO05D001207 9.1e-06 54.7 116 28.4


User provided reference genes

Program Settings