Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold74G24609 Striga asiatica HOM05D009933 ORTHO05D009712 4.7e-97 357.8 179 100.0
SGA_v2.0_scaffold74G24613 Striga asiatica HOM05D009933 ORTHO05D012084 1.9e-82 309.3 175 89.7
SGA_v2.0_scaffold74G24614 Striga asiatica HOM05D008339 ORTHO05D009712 1.2e-31 140.6 120 52.5
Migut.G00780 Erythranthe guttata HOM05D009933 ORTHO05D012084 3.2e-29 132.5 146 44.5
SalBow7G3334 Salvia bowleyana HOM05D000059 ORTHO05D012084 3.3e-26 122.5 150 41.3
SalBow7G3223 Salvia bowleyana HOM05D009933 ORTHO05D012084 4.4e-26 122.1 150 41.3
SalBow7G2832 Salvia bowleyana HOM05D009933 ORTHO05D012084 1.3e-22 110.5 150 40.0
SGA_v2.0_scaffold74G24619 Striga asiatica HOM05D009933 ORTHO05D012084 2.9e-22 109.4 124 40.3
Oeu043379.1 Olea europaea HOM05D009933 ORTHO05D012084 8.5e-22 107.8 150 37.3
Oeu043429.1 Olea europaea HOM05D009933 ORTHO05D012084 3.2e-21 105.9 150 37.3
unitig_60.g25616 Utricularia gibba HOM05D009933 ORTHO05D012084 9.4e-21 104.4 161 36.0
Migut.I00636 Erythranthe guttata HOM05D009933 ORTHO05D012084 1.6e-20 103.6 169 35.5
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 9.8e-18 94.4 178 32.6
Oeu060879.1 Olea europaea HOM05D009933 ORTHO05D012084 2.2e-14 83.2 161 33.5
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 3.8e-14 82.4 168 31.0
Ciclev10013648m.g Citrus clementina HOM05D008339 ORTHO05D009712 5.0e-14 82.0 158 29.7
MD12G1203500 Malus domestica HOM05D008339 ORTHO05D009712 5.0e-14 82.0 164 31.7
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 1.5e-13 80.5 179 27.4
Sabra13G0004800 Salix brachista HOM05D008339 ORTHO05D009712 1.5e-13 80.5 172 32.6
RcHm_v2.0_Chr3g0457691 Rosa chinensis HOM05D008339 ORTHO05D009712 4.2e-13 79.0 176 31.8
Sabra05G0018000 Salix brachista HOM05D008339 ORTHO05D009712 4.2e-13 79.0 171 29.8
CANSAT54G0094 Cannabis sativa HOM05D008339 ORTHO05D009712 5.5e-13 78.6 143 32.2
MD12G1203400 Malus domestica HOM05D008339 ORTHO05D009712 4.7e-12 75.5 174 29.9
Peaxi162Scf01623g00014 Petunia axillaris HOM05D009933 ORTHO05D012084 1.0e-11 74.3 168 30.4
Cpa.g.sc48.196 Carica papaya HOM05D008339 ORTHO05D009712 1.8e-11 73.6 149 30.9
MD12G1203300 Malus domestica HOM05D008339 ORTHO05D009712 2.3e-11 73.2 167 29.3
Prupe.6G309300 Prunus persica HOM05D008339 ORTHO05D009712 2.3e-11 73.2 162 28.4
AT1G09360 Arabidopsis thaliana HOM05D013394 ORTHO05D009712 2.0e-10 70.1 169 28.4
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 1.3e-09 67.4 171 29.2
PGSC0003DMG400038811 Solanum tuberosum HOM05D009933 ORTHO05D012084 4.9e-09 65.5 146 28.1
MELO3C031525.2 Cucumis melo HOM05D008339 ORTHO05D009712 6.3e-09 65.1 159 26.4
Thhalv10009592m.g Eutrema salsugineum HOM05D013394 ORTHO05D009712 8.3e-09 64.7 170 27.6
FvH4_6g08020 Fragaria vesca HOM05D008339 ORTHO05D009712 1.8e-08 63.5 145 27.6
FAN14G1454 Fragaria x ananassa HOM05D008339 ORTHO05D009712 1.8e-08 63.5 145 27.6
FAN02G4119 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.4e-08 63.2 123 29.3
FAN05G1492 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.4e-08 63.2 121 28.9
PGR004G1038 Punica granatum HOM05D008339 ORTHO05D009712 2.4e-08 63.2 167 26.3
FvH4_5g19730 Fragaria vesca HOM05D001578 ORTHO05D001207 3.1e-08 62.8 164 25.0
Sabra05G0006500 Salix brachista HOM05D008339 ORTHO05D009712 1.2e-07 60.8 136 29.4
PGR031G3971 Punica granatum HOM05D008339 ORTHO05D009712 1.6e-07 60.5 167 28.1
Cfa012848 Carpinus fangiana HOM05D008339 ORTHO05D009712 2.0e-07 60.1 180 26.1
Haze_08675 Corylus avellana HOM05D008339 ORTHO05D009712 2.0e-07 60.1 168 28.0
FvH4_6g07980 Fragaria vesca HOM05D008339 ORTHO05D009712 2.0e-07 60.1 165 26.1
FAN14G5780 Fragaria x ananassa HOM05D008339 ORTHO05D009712 2.0e-07 60.1 165 26.1
Nitab4.5_0002441g0060 Nicotiana tabacum HOM05D009933 ORTHO05D012084 3.5e-07 59.3 112 29.5
Eucgr.E00366 Eucalyptus grandis HOM05D008339 ORTHO05D009712 4.5e-07 58.9 146 25.3
Rhsim06G0181100 Rhododendron simsii HOM05D009438 ORTHO05D001819 4.5e-07 58.9 137 29.9
Aqoxy4G02379 Aquilegia oxysepala HOM05D008403 ORTHO05D010317 3.8e-06 55.8 176 23.3
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 3.8e-06 55.8 180 27.8


User provided reference genes

Program Settings