Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold74G24604 Striga asiatica HOM05D006171 ORTHO05D007294 3.0e-163 578.6 310 100.0
SalBow1G2136 Salvia bowleyana HOM05D006171 ORTHO05D007294 5.8e-143 511.1 310 82.3
Migut.D01148 Erythranthe guttata HOM05D006171 ORTHO05D007294 1.5e-138 496.5 310 79.4
MSTRG.9390 Avicennia marina HOM05D006171 ORTHO05D007294 9.6e-138 493.8 310 80.6
CAN.G1008.12 Capsicum annuum HOM05D006171 ORTHO05D007294 6.9e-136 487.6 309 78.3
Peaxi162Scf00314g01040 Petunia axillaris HOM05D006171 ORTHO05D007294 1.5e-135 486.5 305 80.0
Nitab4.5_0002700g0080 Nicotiana tabacum HOM05D006171 ORTHO05D007294 1.9e-133 479.6 310 77.4
Sopen03g036650 Solanum pennellii HOM05D006171 ORTHO05D007294 3.2e-133 478.8 310 77.4
Solyc03g117740.3 Solanum lycopersicum HOM05D006171 ORTHO05D007294 4.2e-133 478.4 310 77.4
Rhsim12G0183500 Rhododendron simsii HOM05D006171 ORTHO05D007294 2.7e-132 475.7 310 82.9
Nitab4.5_0004738g0050 Nicotiana tabacum HOM05D006171 ORTHO05D007294 2.3e-131 472.6 310 77.1
unitig_62.g23820 Utricularia gibba HOM05D006171 ORTHO05D007294 8.7e-131 470.7 310 76.1
PGSC0003DMG400014158 Solanum tuberosum HOM05D006171 ORTHO05D007294 1.9e-130 469.5 310 76.5
vmacro16838 Vaccinium macrocarpon HOM05D006171 ORTHO05D007294 5.6e-130 468.0 310 82.6
FvH4_6g28180 Fragaria vesca HOM05D006171 ORTHO05D007294 3.6e-129 465.3 305 76.4
FAN14G3270 Fragaria x ananassa HOM05D006171 ORTHO05D007294 3.6e-129 465.3 305 76.4
Potri.003G185754 Populus trichocarpa HOM05D006171 ORTHO05D007294 6.2e-129 464.5 254 87.4
Potri.003G185901 Populus trichocarpa HOM05D006171 ORTHO05D007294 8.1e-129 464.2 254 87.0
PGR102G1595 Punica granatum HOM05D006171 ORTHO05D007294 8.1e-129 464.2 254 85.8
Potri.003G185501 Populus trichocarpa HOM05D006171 ORTHO05D007294 1.4e-128 463.4 254 87.0
Eucgr.F03988 Eucalyptus grandis HOM05D006171 ORTHO05D007294 2.4e-128 462.6 254 86.2
FAN09G0753 Fragaria x ananassa HOM05D006171 ORTHO05D007294 2.4e-128 462.6 305 76.1
RcHm_v2.0_Chr2g0132161 Rosa chinensis HOM05D006171 ORTHO05D007294 2.4e-128 462.6 307 78.2
Lsat_1_v5_gn_4_84921 Lactuca sativa HOM05D006171 ORTHO05D007294 6.9e-128 461.1 253 85.8
Thecc.06G048100 Theobroma cacao HOM05D006171 ORTHO05D007294 6.9e-128 461.1 254 85.8
TWI12G1342 Tripterygium wilfordii HOM05D006171 ORTHO05D007294 6.9e-128 461.1 254 86.2
ECA232G3902 Erigeron canadensis HOM05D006171 ORTHO05D007294 9.0e-128 460.7 253 86.2
Gohir.D05G117900 Gossypium hirsutum HOM05D006171 ORTHO05D007294 9.0e-128 460.7 254 85.8
Ah.09g231760 Amaranthus hybridus HOM05D006171 ORTHO05D007294 1.5e-127 459.9 254 86.2
COL.COLO4_26789 Corchorus olitorius HOM05D006171 ORTHO05D007294 5.8e-127 458.0 254 86.2
Manes.11G069800 Manihot esculenta HOM05D006171 ORTHO05D007294 7.6e-127 457.6 312 74.4
Sabra03G0135700 Salix brachista HOM05D006171 ORTHO05D007294 9.9e-127 457.2 261 85.4
THA.LOC104812426 Tarenaya hassleriana HOM05D006171 ORTHO05D007294 1.3e-126 456.8 254 85.0
Duzib235G0222 Durio zibethinus HOM05D006171 ORTHO05D007294 2.2e-126 456.1 254 85.4
Prupe.3G104600 Prunus persica HOM05D006171 ORTHO05D007294 2.9e-126 455.7 254 84.6
Oeu003115.1 Olea europaea HOM05D006171 ORTHO05D007294 6.4e-126 454.5 243 88.9
Oeu003116.1 Olea europaea HOM05D006171 ORTHO05D007294 6.4e-126 454.5 243 88.9
Potri.001G040100 Populus trichocarpa HOM05D006171 ORTHO05D007294 1.4e-125 453.4 254 84.6
A09p61030 Brassica napus HOM05D000031 ORTHO05D007294 1.9e-125 453.0 253 83.4
BolC5t30159H Brassica oleracea HOM05D006171 ORTHO05D007294 1.9e-125 453.0 254 83.1
BraA09t41476Z Brassica rapa HOM05D000031 ORTHO05D007294 1.9e-125 453.0 253 83.4
Thhalv10008259m.g Eutrema salsugineum HOM05D006171 ORTHO05D007294 1.9e-125 453.0 254 83.1
BcaB02g06590 Brassica carinata HOM05D006171 ORTHO05D007294 2.4e-125 452.6 254 83.5
Cfa001846 Carpinus fangiana HOM05D006171 ORTHO05D007294 2.4e-125 452.6 312 72.4
BraA06t24379Z Brassica rapa HOM05D006171 ORTHO05D007294 3.2e-125 452.2 254 83.5
CSS0034221 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 4.2e-125 451.8 307 76.5
BcaC05g25605 Brassica carinata HOM05D006171 ORTHO05D007294 9.3e-125 450.7 254 82.7
Nn2g12468 Nelumbo nucifera HOM05D006171 ORTHO05D007294 1.2e-124 450.3 254 85.0
A06p12100 Brassica napus HOM05D006171 ORTHO05D007294 2.1e-124 449.5 254 82.7
Sp1g14390 Schrenkiella parvula HOM05D006171 ORTHO05D007294 2.1e-124 449.5 254 82.3
AL1G28240 Arabidopsis lyrata HOM05D006171 ORTHO05D007294 2.7e-124 449.1 254 81.9
TAR626G1848 Trochodendron aralioides HOM05D006171 ORTHO05D007294 2.7e-124 449.1 310 73.5
Carub.0001s1588 Capsella rubella HOM05D006171 ORTHO05D007294 3.5e-124 448.7 254 81.9
Lj5C82T4 Lonicera japonica HOM05D006171 ORTHO05D007294 3.5e-124 448.7 253 84.6
MD09G1228700 Malus domestica HOM05D006171 ORTHO05D007294 4.6e-124 448.4 254 83.9
Actinidia36860 Actinidia chinensis HOM05D006171 ORTHO05D007294 6.0e-124 448.0 255 83.9
HanXRQChr16g0499501 Helianthus annuus HOM05D006171 ORTHO05D007294 6.0e-124 448.0 310 72.6
AT1G16080 Arabidopsis thaliana HOM05D006171 ORTHO05D007294 7.9e-124 447.6 254 81.5
Aqoxy7G02339 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 1.8e-123 446.4 254 83.5
Sc10g0006500 Simmondsia chinensis HOM05D006171 ORTHO05D007294 1.8e-123 446.4 254 84.3
C05p14280 Brassica napus HOM05D006171 ORTHO05D007294 3.0e-123 445.7 254 82.3
Cpa.g.sc95.67 Carica papaya HOM05D006171 ORTHO05D007294 5.1e-123 444.9 254 83.9
MELO3C023482.2 Cucumis melo HOM05D006171 ORTHO05D007294 5.1e-123 444.9 309 71.8
CsaV3_7G031750 Cucumis sativus L. HOM05D006171 ORTHO05D007294 8.7e-123 444.1 309 71.8
Atru.chr1.2816 Acer truncatum HOM05D006171 ORTHO05D007294 1.1e-122 443.7 255 83.5
GSVIVG01016093001 Vitis vinifera HOM05D006171 ORTHO05D007294 1.5e-122 443.4 243 87.2
CiPaw.01G256900 Carya illinoinensis HOM05D006171 ORTHO05D007294 1.9e-122 443.0 254 83.1
C08p44630 Brassica napus HOM05D000031 ORTHO05D007294 5.6e-122 441.4 253 81.0
BolC8t52009H Brassica oleracea HOM05D000031 ORTHO05D007294 5.6e-122 441.4 253 81.0
AUR62002650 Chenopodium quinoa HOM05D006171 ORTHO05D007294 5.6e-122 441.4 253 82.6
ClCG09G003450 Citrullus lanatus HOM05D006171 ORTHO05D007294 5.6e-122 441.4 254 81.9
Hund22405 Selenicereus undatus HOM05D006171 ORTHO05D007294 5.6e-122 441.4 255 83.1
Ciclev10025944m.g Citrus clementina HOM05D006171 ORTHO05D007294 9.6e-122 440.7 254 83.1
Cc04_g05360 Coffea canephora HOM05D006171 ORTHO05D007294 1.3e-121 440.3 243 85.6
BcaB03g14506 Brassica carinata HOM05D000031 ORTHO05D007294 6.2e-121 438.0 254 81.1
Potri.001G041140 Populus trichocarpa HOM05D006171 ORTHO05D007294 1.2e-119 433.7 254 82.7
Psat7g260440 Pisum sativum HOM05D006171 ORTHO05D007294 2.9e-118 429.1 302 70.9
HPP92_021945 Vanilla planifolia HOM05D006171 ORTHO05D007294 1.4e-117 426.8 254 79.1
Medtr4g007910 Medicago truncatula HOM05D006171 ORTHO05D007294 2.4e-117 426.0 254 79.5
AUR62034059 Chenopodium quinoa HOM05D006171 ORTHO05D007294 5.5e-117 424.9 297 71.0
Aa31LG7G650 Aethionema arabicum HOM05D006171 ORTHO05D007294 7.1e-117 424.5 254 78.3
Lj3g0005429 Lotus japonicus HOM05D006171 ORTHO05D007294 7.1e-117 424.5 254 78.7
arahy.Tifrunner.gnm1.ann1.B85C5A Arachis hypogaea HOM05D006171 ORTHO05D007294 9.3e-117 424.1 254 79.5
Glyma.07G020900 Glycine max HOM05D006171 ORTHO05D007294 9.3e-117 424.1 254 78.7
arahy.Tifrunner.gnm1.ann1.F1WQ27 Arachis hypogaea HOM05D006171 ORTHO05D007294 1.2e-116 423.7 254 79.5
VMungo1309G0227 Vigna mungo HOM05D006171 ORTHO05D007294 1.2e-116 423.7 254 78.0
Zm00001eb177930 Zea mays HOM05D006171 ORTHO05D007294 1.2e-116 423.7 255 80.0
Phvul.009G155700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 7.9e-116 421.0 254 77.2
Glyma.08G220900 Glycine max HOM05D006171 ORTHO05D007294 1.8e-115 419.9 254 77.6
CDE07G0158 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 2.3e-115 419.5 254 78.3
VMungo0647G1588 Vigna mungo HOM05D006171 ORTHO05D007294 3.0e-115 419.1 254 77.6
Lalb_Chr25g0278721 Lupinus albus HOM05D006171 ORTHO05D007294 2.5e-114 416.0 254 78.7
Phvul.008G253700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 2.5e-114 416.0 254 76.8
MBI14_g16440_MAGBIO Magnolia biondii HOM05D006171 ORTHO05D007294 4.3e-114 415.2 252 79.4
CSS0033272 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 3.7e-113 412.1 307 71.7
EL10Ac8g19420 Beta vulgaris HOM05D006171 ORTHO05D007294 1.3e-105 387.1 253 75.9
Gorai.009G121800 Gossypium raimondii HOM05D006171 ORTHO05D007294 1.1e-104 384.0 218 85.3
Pp3c1_40240 Physcomitrium patens HOM05D006171 ORTHO05D007294 4.1e-104 382.1 253 70.4
SMO356G0223 Selaginella moellendorffii HOM05D006171 ORTHO05D007294 1.1e-98 364.0 254 67.7
CBR_g3722 Chara braunii HOM05D006171 ORTHO05D007294 9.7e-98 360.9 254 67.7
FAN05G3051 Fragaria x ananassa HOM05D006171 ORTHO05D007294 1.7e-97 360.1 280 68.6
Mapoly0047s0137 Marchantia polymorpha HOM05D006171 ORTHO05D007294 1.1e-96 357.5 253 64.8
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 5.3e-96 355.1 249 67.1
Os08g0266300 Oryza sativa ssp. japonica HOM05D006171 ORTHO05D007294 5.3e-96 355.1 217 80.6
CANSAT64G1829 Cannabis sativa HOM05D006171 ORTHO05D007294 2.7e-92 342.8 192 84.9
HanXRQChr16g0499491 Helianthus annuus HOM05D006171 ORTHO05D007294 2.7e-92 342.8 252 64.7
PSO017G5952 Papaver somniferum HOM05D006171 ORTHO05D007294 2.3e-91 339.7 192 83.3
PSO170G6342 Papaver somniferum HOM05D006171 ORTHO05D007294 1.1e-90 337.4 192 82.8
MD17G1227100 Malus domestica HOM05D006171 ORTHO05D007294 3.3e-90 335.9 190 84.7
Dinv21434 Davidia involucrata HOM05D006171 ORTHO05D007294 9.7e-90 334.3 189 85.7
ATR0580G215 Amborella trichopoda HOM05D006171 ORTHO05D007294 3.4e-87 325.9 190 82.1
MCO15G666 Micromonas commoda HOM05D006171 ORTHO05D007294 4.2e-85 318.9 256 61.3
Gohir.A05G117000 Gossypium hirsutum HOM05D006171 ORTHO05D007294 8.0e-84 314.7 176 84.1
PRCOL_00006061 Prasinoderma coloniale HOM05D006171 ORTHO05D007294 1.1e-82 310.8 243 61.7
Cre10.g435850 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 3.3e-82 309.3 254 61.4
AagrBONN_evm.TU.Sc2ySwM_344.694 Anthoceros agrestis HOM05D006171 ORTHO05D007294 9.7e-82 307.8 216 68.5
QL05p037111 Quercus lobata HOM05D006171 ORTHO05D007294 3.6e-76 289.3 179 78.2
Hma1.2p1_2173F.1_g316040 Hydrangea macrophylla HOM05D006171 ORTHO05D007294 5.3e-72 275.4 200 71.0
Aqoxy6G02563 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 5.4e-64 248.8 249 51.8
RcHm_v2.0_Chr2g0132191 Rosa chinensis HOM05D006171 ORTHO05D007294 6.5e-62 241.9 188 66.0
Rhsim12G0183600 Rhododendron simsii HOM05D006171 ORTHO05D007294 1.5e-61 240.7 256 53.9
Sed0008158 Sechium edule HOM05D006171 ORTHO05D007294 3.1e-56 223.0 129 79.1
QL05p037113 Quercus lobata HOM05D006171 ORTHO05D007294 3.4e-34 149.8 85 81.2
CDE04G3654 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 9.2e-32 141.7 112 60.7
AagrBONN_evm.TU.Sc2ySwM_344.1199 Anthoceros agrestis HOM05D006171 ORTHO05D007294 1.6e-31 141.0 269 36.1
Cre03.g167050 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 1.1e-24 118.2 311 31.2
SEGI_00638 Sequoiadendron giganteum HOM05D006171 ORTHO05D007294 6.2e-20 102.4 65 76.9
PRCOL_00003410 Prasinoderma coloniale HOM05D006171 ORTHO05D007294 3.4e-18 96.7 268 32.8
RcHm_v2.0_Chr2g0132221 Rosa chinensis HOM05D006171 ORTHO05D007294 3.8e-17 93.2 56 69.6
arahy.Tifrunner.gnm1.ann1.VYJR5C Arachis hypogaea HOM05D006171 ORTHO05D007294 2.1e-15 87.4 104 54.8
Nn5g31109 Nelumbo nucifera HOM05D006171 ORTHO05D007294 4.5e-10 69.7 53 66.0


User provided reference genes

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