Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 6.0e-106 387.5 192 100.0
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 1.5e-32 143.7 83 86.7
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 1.7e-31 140.2 79 87.3
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 5.3e-30 135.2 79 87.3
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 1.6e-29 133.7 81 81.5
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 3.5e-29 132.5 79 84.8
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 1.0e-28 131.0 81 80.2
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.3e-28 130.6 123 61.8
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 1.3e-28 130.6 79 83.5
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 1.3e-28 130.6 79 83.5
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 2.2e-28 129.8 81 79.0
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 2.2e-28 129.8 82 80.5
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 3.8e-28 129.0 82 80.5
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 3.8e-28 129.0 82 78.0
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 3.8e-28 129.0 81 80.2
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 3.8e-28 129.0 81 76.5
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 3.8e-28 129.0 82 78.0
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 6.5e-28 128.3 82 78.0
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 6.5e-28 128.3 82 79.3
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 6.5e-28 128.3 86 75.6
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 8.5e-28 127.9 82 79.3
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 1.5e-27 127.1 82 78.0
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 1.5e-27 127.1 81 77.8
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 1.9e-27 126.7 81 77.8
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 1.9e-27 126.7 82 75.6
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 2.5e-27 126.3 81 79.0
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 2.5e-27 126.3 82 74.4
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 2.5e-27 126.3 81 79.0
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 3.2e-27 125.9 87 72.4
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 3.2e-27 125.9 82 75.6
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 5.5e-27 125.2 83 77.1
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 5.5e-27 125.2 82 75.6
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 7.2e-27 124.8 82 76.8
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 7.2e-27 124.8 84 73.8
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 1.2e-26 124.0 83 75.9
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 1.6e-26 123.6 81 71.6
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 1.6e-26 123.6 81 71.6
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 1.6e-26 123.6 81 72.8
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 2.1e-26 123.2 81 74.1
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 2.1e-26 123.2 85 69.4
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 2.1e-26 123.2 81 71.6
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 2.7e-26 122.9 82 72.0
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 2.7e-26 122.9 81 71.6
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 2.7e-26 122.9 82 72.0
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 2.7e-26 122.9 91 68.1
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 2.7e-26 122.9 78 78.2
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 2.7e-26 122.9 82 72.0
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 3.6e-26 122.5 82 70.7
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 4.7e-26 122.1 81 70.4
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 6.1e-26 121.7 81 70.4
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 6.1e-26 121.7 82 73.2
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 8.0e-26 121.3 80 73.8
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 8.0e-26 121.3 80 73.8
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 1.4e-25 120.6 81 72.8
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 1.8e-25 120.2 82 70.7
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 1.8e-25 120.2 82 75.6
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.8e-25 120.2 131 58.0
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 1.8e-25 120.2 79 77.2
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 2.3e-25 119.8 84 72.6
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 3.0e-25 119.4 82 75.6
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 3.0e-25 119.4 82 73.2
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 4.0e-25 119.0 95 67.4
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 5.2e-25 118.6 82 74.4
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 6.8e-25 118.2 81 70.4
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 8.8e-25 117.9 82 74.4
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 8.8e-25 117.9 82 74.4
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 2.0e-24 116.7 80 68.8
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 3.4e-24 115.9 82 68.3
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 5.7e-24 115.2 81 67.9
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 1.7e-23 113.6 82 68.3
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 2.2e-23 113.2 83 69.9
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 8.3e-23 111.3 81 70.4
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.8e-22 110.2 71 77.5
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 2.0e-21 106.7 71 73.2
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 1.0e-20 104.4 82 62.2
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 1.3e-20 104.0 80 65.0
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 2.9e-20 102.8 81 63.0
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 3.8e-20 102.4 71 70.4
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 3.8e-20 102.4 82 63.4
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 6.6e-20 101.7 84 61.9
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 8.6e-20 101.3 79 73.4
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 8.6e-20 101.3 71 69.0
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 1.5e-19 100.5 67 71.6
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 1.5e-19 100.5 82 62.2
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 1.9e-19 100.1 71 70.4
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 2.5e-19 99.8 81 70.4
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 5.5e-19 98.6 82 59.8
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 7.2e-19 98.2 67 68.7
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 1.6e-18 97.1 76 65.8
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 2.1e-18 96.7 79 62.0
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 6.1e-18 95.1 82 58.5
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 1.0e-17 94.4 76 65.8
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 1.5e-16 90.5 79 60.8
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 1.5e-16 90.5 56 80.4
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 3.4e-16 89.4 59 74.6
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 4.4e-16 89.0 52 82.7
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 5.7e-16 88.6 59 72.9
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 7.5e-16 88.2 59 72.9
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 3.7e-15 85.9 75 61.3
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 1.1e-14 84.3 71 59.2
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 4.5e-13 79.0 52 71.2
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 2.3e-12 76.6 55 67.3
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 7.3e-11 71.6 76 50.0
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 1.2e-10 70.9 85 47.1
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 8.0e-10 68.2 84 42.9
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 6.4e-07 58.5 56 53.6
TAR369G0162 Trochodendron aralioides HOM05D002795 ORTHO05D000638 8.3e-07 58.2 38 68.4
AagrBONN_evm.TU.Sc2ySwM_228.3577 Anthoceros agrestis HOM05D007446 ORTHO05D009376 4.1e-06 55.8 69 39.1
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 7.0e-06 55.1 82 50.0


User provided reference genes

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