Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24530 Striga asiatica HOM05D006660 ORTHO05D008184 0.0e+00 1183.3 595 100.0
MSTRG.14936 Avicennia marina HOM05D006660 ORTHO05D008184 3.5e-253 878.2 570 77.7
Migut.M00006 Erythranthe guttata HOM05D006660 ORTHO05D008184 4.7e-242 841.3 574 76.0
Thecc.01G186300 Theobroma cacao HOM05D006660 ORTHO05D008184 4.7e-242 841.3 567 75.0
Sopen07g024990 Solanum pennellii HOM05D006660 ORTHO05D008184 6.1e-242 840.9 574 72.1
Solyc07g049590.3 Solanum lycopersicum HOM05D006660 ORTHO05D008184 2.3e-241 839.0 574 72.1
Nitab4.5_0000130g0170 Nicotiana tabacum HOM05D006660 ORTHO05D008184 1.2e-240 836.6 578 71.6
Gorai.001G097700 Gossypium raimondii HOM05D006660 ORTHO05D008184 1.5e-240 836.3 576 72.4
CSS0034515 Camellia sinensis var. sinensis HOM05D006660 ORTHO05D008184 5.7e-240 834.3 567 73.7
PGSC0003DMG400006428 Solanum tuberosum HOM05D006660 ORTHO05D008184 5.7e-240 834.3 574 72.0
Potri.014G163200 Populus trichocarpa HOM05D006660 ORTHO05D008184 7.5e-240 833.9 566 73.7
Peaxi162Scf01333g00136 Petunia axillaris HOM05D006660 ORTHO05D008184 1.3e-239 833.2 575 72.3
Nitab4.5_0008746g0020 Nicotiana tabacum HOM05D006660 ORTHO05D008184 2.8e-239 832.0 578 71.8
Rhsim04G0045800 Rhododendron simsii HOM05D006660 ORTHO05D008184 2.8e-239 832.0 566 73.0
Nn1g07385 Nelumbo nucifera HOM05D006660 ORTHO05D008184 3.7e-239 831.6 566 73.0
CAN.G784.8 Capsicum annuum HOM05D006660 ORTHO05D008184 4.1e-238 828.2 574 71.3
Cc10_g08860 Coffea canephora HOM05D006660 ORTHO05D008184 5.4e-238 827.8 572 72.9
Actinidia10783 Actinidia chinensis HOM05D006660 ORTHO05D008184 2.3e-236 822.4 569 72.1
Prupe.3G205300 Prunus persica HOM05D006660 ORTHO05D008184 3.8e-236 821.6 566 72.3
Duzib133G0254 Durio zibethinus HOM05D006660 ORTHO05D008184 8.6e-236 820.5 577 71.4
TAR626G1025 Trochodendron aralioides HOM05D006660 ORTHO05D008184 1.5e-235 819.7 569 71.7
Sabra14G0124600 Salix brachista HOM05D006660 ORTHO05D008184 1.0e-233 813.5 570 71.6
TWI36G0095 Tripterygium wilfordii HOM05D006660 ORTHO05D008184 3.0e-233 812.0 567 71.4
PGR142G4370 Punica granatum HOM05D006660 ORTHO05D008184 8.9e-233 810.4 577 70.4
RcHm_v2.0_Chr2g0157231 Rosa chinensis HOM05D006660 ORTHO05D008184 8.9e-233 810.4 564 71.6
Ciclev10014722m.g Citrus clementina HOM05D006660 ORTHO05D008184 1.5e-232 809.7 567 70.9
Atru.chr6.3323 Acer truncatum HOM05D006660 ORTHO05D008184 2.0e-232 809.3 572 71.5
Manes.12G060700 Manihot esculenta HOM05D006660 ORTHO05D008184 3.4e-232 808.5 566 71.6
FAN14G2696 Fragaria x ananassa HOM05D006660 ORTHO05D008184 7.5e-232 807.4 568 71.1
FAN14G4026 Fragaria x ananassa HOM05D006660 ORTHO05D008184 7.5e-232 807.4 568 71.1
HanXRQChr10g0306331 Helianthus annuus HOM05D006660 ORTHO05D008184 9.8e-232 807.0 570 69.1
Lsat_1_v5_gn_5_124741 Lactuca sativa HOM05D006660 ORTHO05D008184 1.7e-231 806.2 564 69.9
FvH4_6g41550 Fragaria vesca HOM05D006660 ORTHO05D008184 2.8e-231 805.4 568 71.1
FAN02G1797 Fragaria x ananassa HOM05D006660 ORTHO05D008184 6.3e-231 804.3 567 70.7
CANSAT64G1453 Cannabis sativa HOM05D006660 ORTHO05D008184 7.0e-230 800.8 575 68.7
PSO541G2904 Papaver somniferum HOM05D006660 ORTHO05D008184 2.7e-229 798.9 566 70.1
Sc20g0003860 Simmondsia chinensis HOM05D006660 ORTHO05D008184 3.5e-229 798.5 575 69.2
DCAR_019721 Daucus carota HOM05D006660 ORTHO05D008184 7.8e-229 797.3 569 69.4
PSO675G7408 Papaver somniferum HOM05D006660 ORTHO05D008184 1.3e-228 796.6 566 70.3
AUR62015095 Chenopodium quinoa HOM05D006660 ORTHO05D008184 6.6e-228 794.3 569 70.3
THA.LOC104808860 Tarenaya hassleriana HOM05D006660 ORTHO05D008184 6.6e-228 794.3 562 69.8
FAN05G5067 Fragaria x ananassa HOM05D006660 ORTHO05D008184 8.6e-228 793.9 567 70.4
Sed0019714 Sechium edule HOM05D006660 ORTHO05D008184 1.1e-227 793.5 557 72.0
Gohir.A07G086100 Gossypium hirsutum HOM05D006660 ORTHO05D008184 2.5e-227 792.3 576 69.6
Eucgr.K00713 Eucalyptus grandis HOM05D006660 ORTHO05D008184 3.3e-227 792.0 569 69.6
ClCG02G009540 Citrullus lanatus HOM05D006660 ORTHO05D008184 4.7e-226 788.1 583 69.5
CsaV3_2G034260 Cucumis sativus L. HOM05D006660 ORTHO05D008184 6.8e-225 784.3 562 71.5
MELO3C019360.2 Cucumis melo HOM05D006660 ORTHO05D008184 1.2e-224 783.5 564 71.3
arahy.Tifrunner.gnm1.ann1.7S53TL Arachis hypogaea HOM05D006660 ORTHO05D008184 1.3e-223 780.0 562 69.0
arahy.Tifrunner.gnm1.ann1.GN08CG Arachis hypogaea HOM05D006660 ORTHO05D008184 1.3e-223 780.0 562 69.0
arahy.Tifrunner.gnm1.ann1.V90YU5 Arachis hypogaea HOM05D006660 ORTHO05D008184 1.7e-223 779.6 562 68.9
Medtr3g082870 Medicago truncatula HOM05D006660 ORTHO05D008184 4.9e-223 778.1 562 69.0
CARHR102690 Cardamine hirsuta HOM05D006660 ORTHO05D008184 1.1e-222 776.9 574 67.4
AT2G04740 Arabidopsis thaliana HOM05D006660 ORTHO05D008184 3.2e-222 775.4 568 67.8
Thhalv10002462m.g Eutrema salsugineum HOM05D006660 ORTHO05D008184 7.0e-222 774.2 571 67.4
EL10Ac3g05658 Beta vulgaris HOM05D006660 ORTHO05D008184 3.5e-221 771.9 574 67.6
Ca_16352_v3 Cicer arietinum L. HOM05D006660 ORTHO05D008184 4.6e-221 771.5 562 68.7
Aa31sc53G10 Aethionema arabicum HOM05D006660 ORTHO05D008184 6.0e-221 771.2 571 67.3
Aqoxy1G02841 Aquilegia oxysepala HOM05D006660 ORTHO05D008184 1.3e-220 770.0 596 65.6
TPR.G22464 Trifolium pratense HOM05D006660 ORTHO05D008184 2.3e-220 769.2 553 69.3
HPP92_017850 Vanilla planifolia HOM05D006660 ORTHO05D008184 2.3e-220 769.2 564 68.3
AL3G42350 Arabidopsis lyrata HOM05D006660 ORTHO05D008184 3.0e-220 768.8 569 68.2
MBI16_g31717_MAGBIO Magnolia biondii HOM05D006660 ORTHO05D008184 3.9e-220 768.5 566 67.1
Lj6g0000837 Lotus japonicus HOM05D006660 ORTHO05D008184 5.0e-220 768.1 556 70.0
Carub.0003s2635 Capsella rubella HOM05D006660 ORTHO05D008184 1.9e-219 766.1 568 66.9
Sp3g23370 Schrenkiella parvula HOM05D006660 ORTHO05D008184 3.3e-219 765.4 571 67.1
BolC3t17779H Brassica oleracea HOM05D006660 ORTHO05D008184 6.2e-218 761.1 568 66.5
AUR62017555 Chenopodium quinoa HOM05D006660 ORTHO05D008184 1.8e-217 759.6 622 63.2
C03p55040 Brassica napus HOM05D006660 ORTHO05D008184 4.0e-217 758.4 568 66.4
Glyma.20G057100 Glycine max HOM05D006660 ORTHO05D008184 4.0e-217 758.4 571 67.3
A03p44410 Brassica napus HOM05D006660 ORTHO05D008184 5.2e-217 758.1 568 66.2
BcaC01g03192 Brassica carinata HOM05D006660 ORTHO05D008184 6.8e-217 757.7 568 66.4
BraA03t13574Z Brassica rapa HOM05D006660 ORTHO05D008184 1.2e-216 756.9 564 66.7
Psat5g103920 Pisum sativum HOM05D006660 ORTHO05D008184 1.2e-216 756.9 591 65.3
BcaB08g34485 Brassica carinata HOM05D006660 ORTHO05D008184 1.5e-216 756.5 568 66.9
Ah.14g082930 Amaranthus hybridus HOM05D006660 ORTHO05D008184 1.0e-212 743.8 577 64.8
COL.COLO4_35986 Corchorus olitorius HOM05D006660 ORTHO05D008184 6.6e-212 741.1 566 67.3
FAN09G0285 Fragaria x ananassa HOM05D006660 ORTHO05D008184 4.9e-207 724.9 567 65.8
Zm00001eb281240 Zea mays HOM05D006660 ORTHO05D008184 8.9e-201 704.1 568 63.9
ECA234G1491 Erigeron canadensis HOM05D006660 ORTHO05D008184 3.5e-197 692.2 569 63.3
Os06g0318200 Oryza sativa ssp. japonica HOM05D006660 ORTHO05D008184 5.6e-195 684.9 566 63.1
Haze_12725 Corylus avellana HOM05D006660 ORTHO05D008184 2.6e-192 676.0 462 72.3
SEGI_29705 Sequoiadendron giganteum HOM05D006660 ORTHO05D008184 7.6e-192 674.5 631 57.4
CiPaw.04G193900 Carya illinoinensis HOM05D006660 ORTHO05D008184 6.0e-189 664.8 474 69.0
Cpa.g.sc132.76 Carica papaya HOM05D006660 ORTHO05D008184 8.4e-175 617.8 460 67.0
Oeu040482.1 Olea europaea HOM05D006660 ORTHO05D008184 7.9e-173 611.3 406 75.4
Mapoly0031s0110 Marchantia polymorpha HOM05D006660 ORTHO05D008184 1.3e-172 610.5 624 53.7
vmacro09381 Vaccinium macrocarpon HOM05D006660 ORTHO05D008184 7.4e-171 604.7 423 71.6
Dinv07831 Davidia involucrata HOM05D006660 ORTHO05D008184 2.4e-169 599.7 404 73.5
Pp3c5_19510 Physcomitrium patens HOM05D006660 ORTHO05D008184 4.5e-168 595.5 614 52.1
Pp3c5_19514 Physcomitrium patens HOM05D006660 ORTHO05D008184 4.5e-168 595.5 614 52.1
Gohir.D07G091200 Gossypium hirsutum HOM05D006660 ORTHO05D008184 1.3e-167 594.0 425 69.4
Lalb_Chr24g0402731 Lupinus albus HOM05D006660 ORTHO05D008184 1.5e-160 570.5 409 68.9
VMungo1309G1541 Vigna mungo HOM05D006660 ORTHO05D008184 1.8e-156 557.0 435 64.4
ATR0712G111 Amborella trichopoda HOM05D006660 ORTHO05D008184 7.4e-155 551.6 430 63.7
CDE07G0400 Ceratophyllum demersum HOM05D006660 ORTHO05D008184 8.2e-154 548.1 402 67.4
Atru.chr6.3318 Acer truncatum HOM05D006660 ORTHO05D008184 8.8e-148 528.1 410 65.4
MD17G1109800 Malus domestica HOM05D006660 ORTHO05D008184 1.3e-143 514.2 565 51.0
SMO353G0185 Selaginella moellendorffii HOM05D006660 ORTHO05D008184 6.5e-143 511.9 554 50.5
Lj8A132T54 Lonicera japonica HOM05D006660 ORTHO05D008184 4.0e-132 476.1 311 72.0
GSVIVG01030415001 Vitis vinifera HOM05D006660 ORTHO05D008184 3.4e-123 446.4 305 71.1
AagrBONN_evm.TU.Sc2ySwM_344.2917 Anthoceros agrestis HOM05D006660 ORTHO05D008184 2.0e-120 437.2 560 46.1
CBR_g47999 Chara braunii HOM05D006660 ORTHO05D008184 1.7e-114 417.5 668 37.9
Hund08409 Selenicereus undatus HOM05D006660 ORTHO05D008184 4.9e-114 416.0 330 63.3
Lj8C132T7 Lonicera japonica HOM05D006660 ORTHO05D008184 6.2e-101 372.5 240 77.1
GSVIVG01030416001 Vitis vinifera HOM05D006660 ORTHO05D008184 1.9e-81 307.8 198 77.3
CDE04G2012 Ceratophyllum demersum HOM05D006660 ORTHO05D008184 7.4e-70 269.2 540 35.0
Oeu040483.1 Olea europaea HOM05D006660 ORTHO05D008184 5.3e-68 263.1 162 81.5
AagrBONN_evm.TU.Sc2ySwM_228.2541 Anthoceros agrestis HOM05D006660 ORTHO05D008184 4.6e-64 250.0 416 38.0
Phvul.004G085870 Phaseolus vulgaris HOM05D006660 ORTHO05D008184 7.1e-57 226.1 132 81.8
CDE07G1994 Ceratophyllum demersum HOM05D006660 ORTHO05D008184 1.3e-55 221.9 137 75.2
VMungo1309G0792 Vigna mungo HOM05D006660 ORTHO05D008184 1.3e-55 221.9 186 64.5
ATR0712G102 Amborella trichopoda HOM05D006660 ORTHO05D008184 2.5e-54 217.6 132 76.5
Lalb_Chr24g0402711 Lupinus albus HOM05D006660 ORTHO05D008184 1.3e-42 178.7 102 80.4
Atru.chr6.3319 Acer truncatum HOM05D006660 ORTHO05D008184 7.4e-38 162.9 157 55.4
Cpa.g.sc987.1 Carica papaya HOM05D006660 ORTHO05D008184 1.5e-35 155.2 103 74.8
vmacro09380 Vaccinium macrocarpon HOM05D006660 ORTHO05D008184 4.2e-25 120.6 137 50.4
HanXRQChr08g0218831 Helianthus annuus HOM05D006660 ORTHO05D008184 8.0e-24 116.3 67 77.6
CDE04G2605 Ceratophyllum demersum HOM05D006660 ORTHO05D008184 1.5e-14 85.5 63 65.1
Cfa027280 Carpinus fangiana HOM05D006660 ORTHO05D008184 1.3e-13 82.4 454 24.7
Lj2A1172G32 Lonicera japonica HOM05D002203 ORTHO05D002647 1.4e-07 62.4 181 27.6
Os08g0523850 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D008184 1.5e-06 58.9 148 29.7
AagrBONN_evm.TU.Sc2ySwM_344.2946 Anthoceros agrestis HOM05D002203 ORTHO05D002647 3.4e-06 57.8 174 24.7
Medtr7g094900 Medicago truncatula HOM05D002203 ORTHO05D002647 3.4e-06 57.8 162 27.8
Medtr7g094910 Medicago truncatula HOM05D002203 ORTHO05D002647 3.4e-06 57.8 162 27.8
HanXRQChr11g0336141 Helianthus annuus HOM05D002203 ORTHO05D002647 4.4e-06 57.4 165 26.1
Cre04.g212100 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 5.7e-06 57.0 138 29.0
Hund12162 Selenicereus undatus HOM05D002203 ORTHO05D002647 5.7e-06 57.0 269 23.8


User provided reference genes

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