Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 2.5e-98 362.1 179 100.0
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 1.3e-65 253.4 168 76.8
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 5.8e-63 244.6 167 75.4
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 6.5e-62 241.1 168 74.4
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 2.1e-60 236.1 167 71.3
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 2.1e-60 236.1 170 71.8
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 4.6e-60 235.0 170 68.8
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 6.0e-60 234.6 170 70.6
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 1.0e-59 233.8 170 70.6
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 1.8e-59 233.0 170 70.6
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 3.9e-59 231.9 168 69.6
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 3.9e-59 231.9 167 71.9
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 3.9e-59 231.9 170 69.4
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 1.9e-58 229.6 170 69.4
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 2.5e-58 229.2 169 71.0
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 4.3e-58 228.4 168 69.0
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 4.3e-58 228.4 169 67.5
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 5.7e-58 228.0 168 69.0
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 9.6e-58 227.3 154 74.7
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 9.6e-58 227.3 168 67.9
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 1.3e-57 226.9 168 67.3
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 1.6e-57 226.5 159 66.7
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 2.8e-57 225.7 169 68.6
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 4.8e-57 224.9 168 69.6
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 6.2e-57 224.6 168 66.7
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 1.1e-56 223.8 168 66.1
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 1.4e-56 223.4 154 68.2
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 2.4e-56 222.6 170 67.6
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 5.3e-56 221.5 171 66.1
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 1.5e-55 219.9 168 66.1
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 1.5e-55 219.9 166 67.5
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 2.6e-55 219.2 138 75.4
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 2.6e-55 219.2 168 66.7
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 2.6e-55 219.2 168 64.9
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 3.4e-55 218.8 170 66.5
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 5.8e-55 218.0 168 65.5
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 1.0e-54 217.2 187 59.9
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 1.3e-54 216.9 176 60.8
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 1.7e-54 216.5 168 64.3
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 1.7e-54 216.5 174 66.1
Gorai.001G193200 Gossypium raimondii HOM05D007219 ORTHO05D008995 2.2e-54 216.1 168 66.1
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 2.9e-54 215.7 159 64.2
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 5.0e-54 214.9 138 74.6
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 6.5e-54 214.5 170 67.1
Gohir.D07G173000 Gossypium hirsutum HOM05D007219 ORTHO05D008995 6.5e-54 214.5 168 65.5
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 6.5e-54 214.5 168 63.7
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 1.9e-53 213.0 168 62.5
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 1.9e-53 213.0 170 64.7
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 2.5e-53 212.6 168 63.1
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 3.2e-53 212.2 167 64.7
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 7.1e-53 211.1 168 62.5
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 9.3e-53 210.7 168 63.7
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 1.6e-52 209.9 168 63.1
PSO302G0207 Papaver somniferum HOM05D007219 ORTHO05D008995 2.1e-52 209.5 168 63.1
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 2.7e-52 209.1 170 62.9
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 4.6e-52 208.4 168 60.7
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 4.6e-52 208.4 159 63.5
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 7.9e-52 207.6 159 63.5
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 1.0e-51 207.2 138 71.7
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 1.8e-51 206.5 168 61.9
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 1.8e-51 206.5 168 61.3
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 1.8e-51 206.5 159 62.3
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 2.3e-51 206.1 154 63.6
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 2.3e-51 206.1 168 61.9
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 3.0e-51 205.7 168 62.5
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 8.7e-51 204.1 154 62.3
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 1.1e-50 203.8 168 60.7
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 1.1e-50 203.8 168 60.1
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 1.1e-50 203.8 159 61.0
HPP92_020392 Vanilla planifolia HOM05D007219 ORTHO05D008995 1.5e-50 203.4 166 61.4
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 7.4e-50 201.1 214 53.3
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 2.8e-49 199.1 120 75.8
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 6.3e-49 198.0 139 69.1
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 4.1e-48 195.3 148 62.8
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 9.0e-48 194.1 170 58.8
Os03g0194400 Oryza sativa ssp. japonica HOM05D007219 ORTHO05D008995 3.4e-47 192.2 171 57.9
Zm00001eb401150 Zea mays HOM05D007219 ORTHO05D008995 2.9e-46 189.1 136 65.4
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 1.9e-45 186.4 109 76.1
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 1.9e-45 186.4 109 76.1
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 3.2e-45 185.7 144 67.4
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 6.1e-44 181.4 110 75.5
AUR62017530 Chenopodium quinoa HOM05D007219 ORTHO05D008995 1.1e-42 177.2 230 47.4
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 2.0e-42 176.4 138 60.9
Cfa014252 Carpinus fangiana HOM05D007219 ORTHO05D008995 5.7e-42 174.9 133 61.7
FAN05G4854 Fragaria x ananassa HOM05D007219 ORTHO05D008995 2.0e-39 166.4 174 55.2
SMO115G0308 Selaginella moellendorffii HOM05D007219 ORTHO05D008995 2.0e-39 166.4 154 50.0
EL10Ac9g22747 Beta vulgaris HOM05D007219 ORTHO05D008995 5.0e-38 161.8 169 54.4
Mapoly0089s0028 Marchantia polymorpha HOM05D007219 ORTHO05D008995 4.7e-36 155.2 167 52.1
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.8e-32 143.3 103 62.1
Ca_16365_v3 Cicer arietinum L. HOM05D007219 ORTHO05D008995 8.5e-30 134.4 113 57.5
MCO15G116 Micromonas commoda HOM05D007219 ORTHO05D008995 2.7e-28 129.4 182 42.9
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 8.0e-28 127.9 82 65.9
Ah.14g082820 Amaranthus hybridus HOM05D007219 ORTHO05D008995 1.7e-25 120.2 111 56.8
ClCG02G002620 Citrullus lanatus HOM05D007219 ORTHO05D008995 2.2e-25 119.8 114 60.5
VMungo0540G0477 Vigna mungo HOM05D007219 ORTHO05D008995 4.1e-24 115.5 173 41.6
AUR62015074 Chenopodium quinoa HOM05D007219 ORTHO05D008995 1.0e-22 110.9 112 55.4
CBR_g31837 Chara braunii HOM05D007219 ORTHO05D008995 2.1e-20 103.2 222 32.4
Rhsim06G0172900 Rhododendron simsii HOM05D007219 ORTHO05D008995 8.8e-19 97.8 190 38.9
MD17G1111700 Malus domestica HOM05D007219 ORTHO05D008995 4.4e-18 95.5 108 48.1
Nitab4.5_0002877g0050 Nicotiana tabacum HOM05D007219 ORTHO05D008995 2.2e-17 93.2 89 62.9
Actinidia09773 Actinidia chinensis HOM05D007219 ORTHO05D008995 7.7e-15 84.7 55 72.7
Thhalv10003074m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 6.5e-14 81.6 58 70.7
PRCOL_00004041 Prasinoderma coloniale HOM05D007219 ORTHO05D008995 2.0e-10 70.1 122 39.3
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 3.1e-08 62.8 36 75.0
CSS0021882 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 4.1e-08 62.4 34 79.4


User provided reference genes

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