Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24498 Striga asiatica HOM05D016037 ORTHO05D003654 3.2e-97 358.6 209 100.0
SalBow7G0966 Salvia bowleyana HOM05D005871 ORTHO05D003654 4.5e-30 135.6 214 44.4
MSTRG.6638 Avicennia marina HOM05D016037 ORTHO05D003654 1.7e-21 107.1 208 40.4
Migut.M00045 Erythranthe guttata HOM05D005871 ORTHO05D003654 6.0e-19 98.6 197 45.7
PGSC0003DMG400017373 Solanum tuberosum HOM05D016037 ORTHO05D003654 7.4e-17 91.7 193 35.2
Nitab4.5_0001701g0160 Nicotiana tabacum HOM05D016037 ORTHO05D003654 1.6e-16 90.5 196 39.8
Peaxi162Scf00802g10028 Petunia axillaris HOM05D016037 ORTHO05D003654 5.3e-15 85.5 200 40.0
Solyc07g045530.2 Solanum lycopersicum HOM05D016037 ORTHO05D003654 6.9e-15 85.1 208 33.2
TAR626G0615 Trochodendron aralioides HOM05D005871 ORTHO05D003654 2.9e-13 79.7 201 31.8
Haze_09808 Corylus avellana HOM05D005871 ORTHO05D003654 1.4e-12 77.4 211 34.6
FAN02G3820 Fragaria x ananassa HOM05D005871 ORTHO05D003654 5.5e-12 75.5 192 32.8
CiPaw.03G281200 Carya illinoinensis HOM05D005871 ORTHO05D003654 1.6e-11 73.9 208 35.6
Cfa020208 Carpinus fangiana HOM05D005871 ORTHO05D003654 2.1e-11 73.6 210 37.6
Cfa014230 Carpinus fangiana HOM05D008806 ORTHO05D003654 6.1e-11 72.0 216 29.6
FvH4_6g40700 Fragaria vesca HOM05D008806 ORTHO05D003654 3.0e-10 69.7 192 33.9
Sabra16G0239800 Salix brachista HOM05D005871 ORTHO05D003654 3.9e-10 69.3 243 27.6
Oeu029962.1 Olea europaea HOM05D016037 ORTHO05D003654 5.1e-10 68.9 179 43.0
Potri.001G366500 Populus trichocarpa HOM05D005871 ORTHO05D003654 8.7e-10 68.2 248 27.8
TPR.G35473 Trifolium pratense HOM05D005871 ORTHO05D003654 1.9e-09 67.0 214 29.4
Prupe.3G198500 Prunus persica HOM05D008806 ORTHO05D003654 3.3e-09 66.2 193 33.2
QL08p004709 Quercus lobata HOM05D005871 ORTHO05D003654 4.3e-09 65.9 230 35.7
Thecc.01G195400 Theobroma cacao HOM05D008806 ORTHO05D003654 5.7e-09 65.5 221 27.6
Nn1g03208 Nelumbo nucifera HOM05D005871 ORTHO05D003654 7.4e-09 65.1 211 28.9
Manes.03G140300 Manihot esculenta HOM05D005871 ORTHO05D003654 9.7e-09 64.7 247 30.8
CiPaw.12G137100 Carya illinoinensis HOM05D005871 ORTHO05D003654 1.3e-08 64.3 203 35.5
Lalb_Chr18g0057151 Lupinus albus HOM05D005871 ORTHO05D003654 1.6e-08 63.9 209 28.7
QL05p068166 Quercus lobata HOM05D005871 ORTHO05D003654 2.2e-08 63.5 191 29.8
QL08p028006 Quercus lobata HOM05D008806 ORTHO05D003654 2.8e-08 63.2 190 40.0
Manes.03G140301 Manihot esculenta HOM05D005871 ORTHO05D003654 4.8e-08 62.4 85 37.6
Sed0014857 Sechium edule HOM05D005871 ORTHO05D003654 6.3e-08 62.0 209 31.1
TAR629G2179 Trochodendron aralioides HOM05D005871 ORTHO05D003654 8.2e-08 61.6 85 40.0
Haze_12634 Corylus avellana HOM05D008806 ORTHO05D003654 1.1e-07 61.2 213 35.2
Hma1.2p1_0657F.1_g196840 Hydrangea macrophylla HOM05D005871 ORTHO05D003654 1.1e-07 61.2 230 29.1
Phvul.008G278200 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 1.1e-07 61.2 204 26.0
SalBow8G3140 Salvia bowleyana HOM05D005871 ORTHO05D003654 1.4e-07 60.8 186 34.4
Ah.09g234010 Amaranthus hybridus HOM05D005871 ORTHO05D003654 1.8e-07 60.5 219 30.6
Ciclev10016749m.g Citrus clementina HOM05D008806 ORTHO05D003654 1.8e-07 60.5 214 27.1
VMungo0647G1579 Vigna mungo HOM05D005871 ORTHO05D003654 1.8e-07 60.5 230 27.4
QL06p003419 Quercus lobata HOM05D008806 ORTHO05D003654 3.1e-07 59.7 214 28.5
Phvul.006G140600 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 4.1e-07 59.3 209 26.8
PGR083G2866 Punica granatum HOM05D005871 ORTHO05D003654 5.3e-07 58.9 69 44.9
FAN09G0572 Fragaria x ananassa HOM05D008806 ORTHO05D003654 6.9e-07 58.5 151 29.1
Manes.12G064700 Manihot esculenta HOM05D008806 ORTHO05D003654 9.0e-07 58.2 175 29.1
Rhsim06G0176100 Rhododendron simsii HOM05D008806 ORTHO05D003654 9.0e-07 58.2 189 40.2
Nn1g07488 Nelumbo nucifera HOM05D005871 ORTHO05D003654 2.0e-06 57.0 201 28.4
TWI38G0819 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 2.0e-06 57.0 208 25.5
DCAR_022606 Daucus carota HOM05D005871 ORTHO05D003654 2.6e-06 56.6 104 39.4
Potri.014G166900 Populus trichocarpa HOM05D008806 ORTHO05D003654 2.6e-06 56.6 200 36.5
VMungo0540G0718 Vigna mungo HOM05D005871 ORTHO05D003654 2.6e-06 56.6 209 26.8
Glyma.18G078200 Glycine max HOM05D005871 ORTHO05D003654 3.4e-06 56.2 231 24.2
Glyma.14G014200 Glycine max HOM05D005871 ORTHO05D003654 5.9e-06 55.5 246 27.6
Prupe.4G241600 Prunus persica HOM05D005871 ORTHO05D003654 5.9e-06 55.5 231 34.6
Phvul.006G056300 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 7.7e-06 55.1 222 24.8
Duzib138G0120 Durio zibethinus HOM05D008806 ORTHO05D003654 1.0e-05 54.7 197 26.9
MD03G1184900 Malus domestica HOM05D005871 ORTHO05D003654 1.0e-05 54.7 211 33.6


User provided reference genes

Program Settings