Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 3.3e-176 621.7 340 100.0
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 3.6e-114 415.6 341 71.0
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 1.1e-113 414.1 343 68.8
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 3.3e-107 392.5 344 59.0
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 5.3e-105 385.2 348 57.5
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 6.4e-103 378.3 338 58.6
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 2.4e-102 376.3 231 76.2
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 5.4e-102 375.2 235 74.9
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 9.3e-102 374.4 235 74.9
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 1.2e-101 374.0 235 73.6
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 2.7e-101 372.9 338 58.3
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 4.6e-101 372.1 235 74.5
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 6.0e-101 371.7 344 56.7
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 1.7e-100 370.2 345 55.4
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 2.3e-100 369.8 235 73.6
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 3.9e-100 369.0 349 55.9
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 5.1e-100 368.6 235 71.9
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 6.6e-100 368.2 347 55.0
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 8.7e-100 367.9 338 55.3
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 8.7e-100 367.9 321 58.9
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 1.1e-99 367.5 349 56.7
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 2.5e-99 366.3 350 57.7
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 4.3e-99 365.5 344 55.8
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 7.3e-99 364.8 349 56.2
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 1.6e-98 363.6 347 54.2
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 2.8e-98 362.8 347 54.2
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 3.6e-98 362.5 235 72.3
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 4.8e-98 362.1 235 72.8
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 1.4e-97 360.5 337 56.7
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 1.8e-97 360.1 341 54.8
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 4.0e-97 359.0 347 55.3
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 5.3e-97 358.6 336 54.5
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 6.9e-97 358.2 338 55.3
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 2.6e-96 356.3 235 69.4
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 5.8e-96 355.1 340 54.7
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 7.6e-96 354.8 345 53.6
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 1.3e-95 354.0 351 54.1
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 1.3e-95 354.0 347 56.8
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 1.7e-95 353.6 235 70.2
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 2.2e-95 353.2 235 69.8
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 8.4e-95 351.3 348 55.7
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 1.1e-94 350.9 223 73.1
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 1.1e-94 350.9 229 70.3
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 1.1e-94 350.9 229 70.7
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 1.4e-94 350.5 346 53.5
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 3.2e-94 349.4 340 54.1
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 2.1e-93 346.7 355 56.9
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 2.1e-93 346.7 229 70.7
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 2.7e-93 346.3 338 52.1
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 1.3e-92 344.0 236 66.5
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 2.3e-92 343.2 341 54.0
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 2.3e-92 343.2 235 68.1
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 3.9e-92 342.4 282 59.6
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 3.9e-92 342.4 235 66.4
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 1.1e-91 340.9 282 61.0
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 9.6e-91 337.8 236 68.2
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 8.1e-90 334.7 344 56.4
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 1.4e-89 334.0 313 57.5
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 2.4e-89 333.2 349 51.3
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 2.4e-89 333.2 335 52.5
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 3.1e-89 332.8 348 53.7
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 3.1e-89 332.8 236 65.3
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 6.9e-89 331.6 236 64.4
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 6.9e-89 331.6 342 51.8
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 2.0e-88 330.1 349 50.4
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 2.6e-88 329.7 237 64.1
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 2.6e-88 329.7 237 64.1
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 3.4e-88 329.3 331 52.9
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 1.3e-87 327.4 393 53.7
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 4.9e-87 325.5 237 63.3
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 4.9e-87 325.5 332 53.6
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 6.5e-87 325.1 238 63.0
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 1.9e-86 323.6 341 50.7
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 2.5e-86 323.2 225 66.2
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 5.5e-86 322.0 222 68.9
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 7.1e-86 321.6 300 56.0
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 2.7e-85 319.7 233 66.1
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 3.5e-85 319.3 343 49.9
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 1.1e-83 314.3 221 64.3
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 2.5e-83 313.2 206 71.8
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 1.6e-82 310.5 224 67.0
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 1.8e-81 307.0 435 45.3
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 7.6e-80 301.6 346 49.7
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 7.6e-80 301.6 215 66.0
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 1.9e-78 297.0 198 70.2
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.2e-78 295.8 366 46.7
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.2e-78 295.8 366 46.7
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 3.5e-77 292.7 207 67.1
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 4.6e-69 265.8 174 68.4
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 2.2e-66 256.9 344 45.1
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 4.8e-66 255.8 221 51.6
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 6.3e-66 255.4 285 55.1
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 9.1e-65 251.5 221 52.0
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 2.9e-63 246.5 169 68.6
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 3.8e-63 246.1 235 51.1
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 1.1e-62 244.6 286 46.2
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 4.7e-61 239.2 302 46.0
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 4.4e-59 232.6 249 51.0
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 1.7e-58 230.7 221 48.4
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 2.2e-58 230.3 246 52.4
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 1.9e-54 217.2 262 56.5
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 3.6e-53 213.0 226 50.0
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 3.6e-53 213.0 226 50.0
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 2.8e-42 176.8 218 39.0
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 2.7e-37 160.2 198 39.4
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 1.3e-31 141.4 93 67.7
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.9e-30 137.5 108 59.3
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 5.6e-30 136.0 108 59.3
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 2.2e-26 124.0 78 71.8
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 4.1e-25 119.8 97 56.7
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 1.3e-18 98.2 170 38.2
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 2.3e-12 77.4 47 72.3
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 7.8e-08 62.4 39 69.2
Oeu037217.1 Olea europaea HOM05D006836 ORTHO05D049434 3.3e-06 57.0 139 46.0
Oeu037216.1 Olea europaea HOM05D006836 ORTHO05D049434 4.3e-06 56.6 139 46.0


User provided reference genes

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