Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24486 Striga asiatica HOM05D007471 ORTHO05D009481 3.9e-148 528.1 267 100.0
Migut.M00062 Erythranthe guttata HOM05D007471 ORTHO05D009481 1.2e-56 224.2 278 49.3
MSTRG.6626 Avicennia marina HOM05D007471 ORTHO05D009481 4.6e-56 222.2 239 54.4
SalBow7G1274 Salvia bowleyana HOM05D007471 ORTHO05D009481 6.0e-56 221.9 276 48.6
Cpa.g.sc136.59 Carica papaya HOM05D007471 ORTHO05D009481 3.3e-38 162.9 239 39.3
Nitab4.5_0003086g0070 Nicotiana tabacum HOM05D007471 ORTHO05D009481 4.8e-37 159.1 235 40.4
CSS0003771 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 4.1e-36 156.0 239 37.2
Cc05_g01930 Coffea canephora HOM05D007471 ORTHO05D009481 4.1e-36 156.0 258 38.8
Solyc07g045150.3 Solanum lycopersicum HOM05D007471 ORTHO05D009481 6.9e-36 155.2 239 40.2
PGSC0003DMG402017414 Solanum tuberosum HOM05D007471 ORTHO05D009481 6.9e-36 155.2 239 40.2
Sopen07g023700 Solanum pennellii HOM05D007471 ORTHO05D009481 9.1e-36 154.8 239 39.7
Hma1.2p1_0599F.1_g186930 Hydrangea macrophylla HOM05D007471 ORTHO05D009481 3.4e-35 152.9 239 37.2
Actinidia12353 Actinidia chinensis HOM05D007471 ORTHO05D009481 5.9e-35 152.1 258 34.5
QL04p066931 Quercus lobata HOM05D007471 ORTHO05D009481 1.0e-34 151.4 235 37.0
Lj8A138T38 Lonicera japonica HOM05D007471 ORTHO05D009481 1.3e-34 151.0 239 39.7
TAR626G0037 Trochodendron aralioides HOM05D007471 ORTHO05D009481 5.0e-34 149.1 260 35.0
CAN.G826.3 Capsicum annuum HOM05D007471 ORTHO05D009481 6.5e-34 148.7 154 50.0
MD17G1122600 Malus domestica HOM05D007471 ORTHO05D009481 4.2e-33 146.0 240 37.1
Peaxi162Scf00359g00320 Petunia axillaris HOM05D007471 ORTHO05D009481 7.2e-33 145.2 235 38.7
Dinv05327 Davidia involucrata HOM05D007471 ORTHO05D009481 9.4e-33 144.8 232 38.8
CSS0004770 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 2.1e-32 143.7 154 46.1
RcHm_v2.0_Chr2g0155251 Rosa chinensis HOM05D007471 ORTHO05D009481 6.1e-32 142.1 240 36.2
Psat1g019920 Pisum sativum HOM05D007471 ORTHO05D009481 7.9e-32 141.7 241 37.8
MD17G1121200 Malus domestica HOM05D007471 ORTHO05D009481 3.0e-31 139.8 240 36.2
Oeu000672.1 Olea europaea HOM05D007471 ORTHO05D009481 6.7e-31 138.7 197 42.1
Lj6g0025127 Lotus japonicus HOM05D007471 ORTHO05D009481 2.0e-30 137.1 241 36.9
Prupe.3G192700 Prunus persica HOM05D007471 ORTHO05D009481 7.4e-30 135.2 162 44.4
FvH4_6g40230 Fragaria vesca HOM05D007471 ORTHO05D009481 3.7e-29 132.9 240 34.6
FAN05G3962 Fragaria x ananassa HOM05D007471 ORTHO05D009481 3.7e-29 132.9 240 34.2
HanXRQChr09g0257421 Helianthus annuus HOM05D007471 ORTHO05D009481 3.7e-29 132.9 255 34.5
FAN14G4986 Fragaria x ananassa HOM05D007471 ORTHO05D009481 1.4e-28 131.0 240 34.6
Eucgr.K01386 Eucalyptus grandis HOM05D007471 ORTHO05D009481 1.8e-28 130.6 242 36.0
Manes.12G067200 Manihot esculenta HOM05D007471 ORTHO05D009481 1.8e-28 130.6 240 32.5
Rhsim06G0179200 Rhododendron simsii HOM05D000358 ORTHO05D001562 1.8e-28 130.6 239 33.9
Ciclev10016450m.g Citrus clementina HOM05D007471 ORTHO05D009481 2.4e-28 130.2 233 32.2
Lalb_Chr10g0094201 Lupinus albus HOM05D007471 ORTHO05D009481 2.4e-28 130.2 241 36.5
FAN09G1454 Fragaria x ananassa HOM05D007471 ORTHO05D009481 3.1e-28 129.8 240 34.2
Nn1g07565 Nelumbo nucifera HOM05D007471 ORTHO05D009481 3.1e-28 129.8 233 34.8
AL3G19000 Arabidopsis lyrata HOM05D007471 ORTHO05D009481 7.0e-28 128.6 279 29.4
Lsat_1_v5_gn_9_102921 Lactuca sativa HOM05D007471 ORTHO05D009481 7.0e-28 128.6 162 43.2
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 9.1e-28 128.3 241 35.7
Medtr2g049140 Medicago truncatula HOM05D007471 ORTHO05D009481 9.1e-28 128.3 241 34.4
Haze_12583 Corylus avellana HOM05D007471 ORTHO05D009481 1.2e-27 127.9 241 35.3
MBI14_g27042_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 1.2e-27 127.9 240 34.6
PGR044G0015 Punica granatum HOM05D007471 ORTHO05D009481 2.0e-27 127.1 239 34.7
CARHR082340 Cardamine hirsuta HOM05D007471 ORTHO05D009481 3.5e-27 126.3 279 30.5
ECA240G3131 Erigeron canadensis HOM05D001349 ORTHO05D001980 3.5e-27 126.3 162 45.1
MELO3C024177.2 Cucumis melo HOM05D007471 ORTHO05D009481 5.9e-27 125.6 240 31.7
Glyma.09G086000 Glycine max HOM05D007471 ORTHO05D009481 5.9e-27 125.6 241 34.0
VMungo1309G3041 Vigna mungo HOM05D007471 ORTHO05D009481 1.3e-26 124.4 241 34.9
Sed0023252 Sechium edule HOM05D007471 ORTHO05D009481 1.7e-26 124.0 241 34.0
TPR.G20279 Trifolium pratense HOM05D007471 ORTHO05D009481 2.2e-26 123.6 163 44.2
Glyma.15G195100 Glycine max HOM05D007471 ORTHO05D009481 2.9e-26 123.2 242 33.9
CsaV3_7G002330 Cucumis sativus L. HOM05D007471 ORTHO05D009481 3.8e-26 122.9 240 31.7
COL.COLO4_19658 Corchorus olitorius HOM05D007471 ORTHO05D009481 5.0e-26 122.5 157 42.7
Sc21g0000400 Simmondsia chinensis HOM05D007471 ORTHO05D009481 6.5e-26 122.1 262 32.4
GSVIVG01030129001 Vitis vinifera HOM05D007471 ORTHO05D009481 6.5e-26 122.1 256 32.4
ClCG02G003070 Citrullus lanatus HOM05D007471 ORTHO05D009481 1.1e-25 121.3 257 31.9
PSO210G0038 Papaver somniferum HOM05D007471 ORTHO05D009481 1.1e-25 121.3 256 30.9
THA.LOC104819026 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 1.1e-25 121.3 242 33.9
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 3.2e-25 119.8 162 40.7
TWI36G0936 Tripterygium wilfordii HOM05D007471 ORTHO05D009481 3.2e-25 119.8 258 28.7
Aa31LG5G18220 Aethionema arabicum HOM05D007471 ORTHO05D009481 2.7e-24 116.7 282 30.9
PSO210G4841 Papaver somniferum HOM05D007471 ORTHO05D009481 2.7e-24 116.7 258 30.6
Phvul.009G214800 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 6.1e-24 115.5 241 33.6
A03p35390 Brassica napus HOM05D007471 ORTHO05D009481 3.0e-23 113.2 279 28.7
BraA03t12717Z Brassica rapa HOM05D007471 ORTHO05D009481 3.0e-23 113.2 279 28.7
Sp3g06580 Schrenkiella parvula HOM05D007471 ORTHO05D009481 4.0e-23 112.8 160 38.1
BcaB03g14688 Brassica carinata HOM05D007471 ORTHO05D009481 6.7e-23 112.1 237 29.5
vmacro12060 Vaccinium macrocarpon HOM05D007471 ORTHO05D009481 2.0e-22 110.5 217 34.1
Thhalv10021420m.g Eutrema salsugineum HOM05D007471 ORTHO05D009481 2.6e-22 110.2 160 37.5
TPR.G28406 Trifolium pratense HOM05D007471 ORTHO05D009481 2.2e-21 107.1 191 37.2
Duzib133G1025 Durio zibethinus HOM05D007471 ORTHO05D009481 2.8e-21 106.7 159 37.7
BolC3t16568H Brassica oleracea HOM05D007471 ORTHO05D009481 3.7e-21 106.3 160 37.5
Gohir.A07G193500 Gossypium hirsutum HOM05D007471 ORTHO05D009481 4.8e-21 105.9 161 37.3
BcaB03g14686 Brassica carinata HOM05D007471 ORTHO05D009481 6.3e-21 105.5 160 36.2
BcaC01g04271 Brassica carinata HOM05D007471 ORTHO05D009481 6.3e-21 105.5 160 37.5
C03p43000 Brassica napus HOM05D007471 ORTHO05D009481 6.3e-21 105.5 160 37.5
AT3G07640 Arabidopsis thaliana HOM05D007471 ORTHO05D009481 1.1e-20 104.8 238 29.4
Gohir.D07G199700 Gossypium hirsutum HOM05D007471 ORTHO05D009481 1.8e-20 104.0 161 37.3
Carub.0003s0722 Capsella rubella HOM05D007471 ORTHO05D009481 7.0e-20 102.1 282 28.0
Gorai.001G223900 Gossypium raimondii HOM05D007471 ORTHO05D009481 2.7e-19 100.1 161 36.6
SHI10184 Sapria himalayana HOM05D007471 ORTHO05D009481 2.2e-18 97.1 137 35.8
AUR62018237 Chenopodium quinoa HOM05D007471 ORTHO05D009481 2.9e-18 96.7 248 33.9
Thecc.01G199800 Theobroma cacao HOM05D007471 ORTHO05D009481 2.9e-18 96.7 147 34.7
AUR62037766 Chenopodium quinoa HOM05D007471 ORTHO05D009481 1.5e-17 94.4 243 31.3
Atru.BG.43.p Acer truncatum HOM05D007471 ORTHO05D009481 4.7e-16 89.4 181 32.6
ATR0751G158 Amborella trichopoda HOM05D007471 ORTHO05D009481 1.0e-15 88.2 261 30.3
Phvul.009G215100 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 1.0e-15 88.2 241 30.3
Zm00001eb245410 Zea mays HOM05D007471 ORTHO05D009481 1.4e-15 87.8 239 25.9
MBI14_g39587_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 1.5e-14 84.3 102 44.1
Os02g0582400 Oryza sativa ssp. japonica HOM05D007471 ORTHO05D009481 7.5e-14 82.0 236 26.3
SEGI_00651 Sequoiadendron giganteum HOM05D007471 ORTHO05D009481 9.8e-14 81.6 243 26.7
THA.LOC104822442 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 9.8e-14 81.6 262 26.0
CDE11G0370 Ceratophyllum demersum HOM05D007471 ORTHO05D009481 2.4e-12 77.0 243 27.2
DCAR_019662 Daucus carota HOM05D007471 ORTHO05D009481 7.0e-12 75.5 124 33.1
FAN02G2672 Fragaria x ananassa HOM05D007471 ORTHO05D009481 1.6e-08 64.3 240 23.8
Peaxi162Scf00289g00039 Petunia axillaris HOM05D007471 ORTHO05D009481 5.2e-07 59.3 56 50.0


User provided reference genes

Program Settings