Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24476 Striga asiatica HOM05D006939 ORTHO05D008616 8.5e-210 733.4 366 100.0
SalBow7G0985 Salvia bowleyana HOM05D006939 ORTHO05D008616 5.8e-142 508.1 333 76.3
Migut.M00074 Erythranthe guttata HOM05D006939 ORTHO05D008616 4.7e-136 488.4 320 76.9
Lj8C13T0 Lonicera japonica HOM05D006939 ORTHO05D008616 1.6e-123 446.8 331 70.1
Dinv25196 Davidia involucrata HOM05D006939 ORTHO05D008616 3.5e-123 445.7 334 69.2
CSS0002269 Camellia sinensis var. sinensis HOM05D006939 ORTHO05D008616 4.3e-121 438.7 322 70.2
PGSC0003DMG400001838 Solanum tuberosum HOM05D006939 ORTHO05D008616 1.3e-120 437.2 318 69.5
Solyc08g077520.3 Solanum lycopersicum HOM05D006939 ORTHO05D008616 4.8e-120 435.3 318 69.2
Sopen08g026100 Solanum pennellii HOM05D006939 ORTHO05D008616 4.8e-120 435.3 318 69.2
CAN.G1445.9 Capsicum annuum HOM05D006939 ORTHO05D008616 2.6e-118 429.5 309 69.9
GSVIVG01035522001 Vitis vinifera HOM05D006939 ORTHO05D008616 1.7e-117 426.8 333 66.7
Sc09g0010200 Simmondsia chinensis HOM05D006939 ORTHO05D008616 2.9e-117 426.0 321 67.9
Cc02_g39540 Coffea canephora HOM05D006939 ORTHO05D008616 6.4e-117 424.9 318 69.5
MSTRG.14901 Avicennia marina HOM05D006939 ORTHO05D008616 2.4e-116 422.9 319 68.3
Gohir.D05G067200 Gossypium hirsutum HOM05D006939 ORTHO05D008616 2.4e-116 422.9 318 68.2
Peaxi162Scf00084g00007 Petunia axillaris HOM05D006939 ORTHO05D008616 5.5e-116 421.8 304 71.1
Gorai.009G068000 Gossypium raimondii HOM05D006939 ORTHO05D008616 1.2e-115 420.6 333 66.1
Ca_15668_v3 Cicer arietinum L. HOM05D006939 ORTHO05D008616 6.0e-115 418.3 331 65.6
QL12p025112 Quercus lobata HOM05D006939 ORTHO05D008616 7.9e-115 417.9 334 65.9
Gohir.A05G064600 Gossypium hirsutum HOM05D006939 ORTHO05D008616 1.3e-114 417.2 318 67.9
Duzib168G0459 Durio zibethinus HOM05D006939 ORTHO05D008616 5.1e-114 415.2 321 66.7
Thecc.09G006900 Theobroma cacao HOM05D006939 ORTHO05D008616 5.1e-114 415.2 320 65.6
TAR369G0747 Trochodendron aralioides HOM05D006939 ORTHO05D008616 6.7e-114 414.8 334 65.3
Ciclev10008814m.g Citrus clementina HOM05D006939 ORTHO05D008616 1.1e-113 414.1 318 69.2
Lj1g0013260 Lotus japonicus HOM05D006939 ORTHO05D008616 7.4e-113 411.4 334 64.4
VMungo1309G0618 Vigna mungo HOM05D006939 ORTHO05D008616 7.4e-113 411.4 334 63.8
AUR62020602 Chenopodium quinoa HOM05D006939 ORTHO05D008616 9.6e-113 411.0 323 67.2
Glyma.04G075200 Glycine max HOM05D006939 ORTHO05D008616 9.6e-113 411.0 318 65.7
Glyma.06G076400 Glycine max HOM05D006939 ORTHO05D008616 1.6e-112 410.2 334 64.1
Nn8g40552 Nelumbo nucifera HOM05D006939 ORTHO05D008616 6.2e-112 408.3 333 62.8
MELO3C011191.2 Cucumis melo HOM05D006939 ORTHO05D008616 8.1e-112 407.9 331 65.9
CiPaw.07G213000 Carya illinoinensis HOM05D006939 ORTHO05D008616 1.1e-111 407.5 316 67.7
Manes.03G003600 Manihot esculenta HOM05D006939 ORTHO05D008616 1.4e-111 407.1 318 67.3
THA.LOC104814976 Tarenaya hassleriana HOM05D006939 ORTHO05D008616 1.8e-111 406.8 318 65.7
HanXRQChr12g0379171 Helianthus annuus HOM05D006939 ORTHO05D008616 2.4e-111 406.4 319 65.8
arahy.Tifrunner.gnm1.ann1.8I4SMW Arachis hypogaea HOM05D006939 ORTHO05D008616 5.3e-111 405.2 316 66.8
arahy.Tifrunner.gnm1.ann1.WZEV1S Arachis hypogaea HOM05D006939 ORTHO05D008616 9.0e-111 404.4 316 66.8
Actinidia06924 Actinidia chinensis HOM05D006939 ORTHO05D008616 2.0e-110 403.3 322 67.7
Atru.chr7.2637 Acer truncatum HOM05D006939 ORTHO05D008616 2.6e-110 402.9 332 63.9
CsaV3_2G031410 Cucumis sativus L. HOM05D006939 ORTHO05D008616 2.6e-110 402.9 331 64.7
TWI63G0558 Tripterygium wilfordii HOM05D006939 ORTHO05D008616 3.4e-110 402.5 323 65.3
TPR.G12361 Trifolium pratense HOM05D006939 ORTHO05D008616 5.8e-110 401.7 311 65.9
AUR62009066 Chenopodium quinoa HOM05D006939 ORTHO05D008616 1.7e-109 400.2 327 65.4
Hund19405 Selenicereus undatus HOM05D006939 ORTHO05D008616 2.2e-109 399.8 352 61.1
Lalb_Chr08g0243571 Lupinus albus HOM05D006939 ORTHO05D008616 6.5e-109 398.3 334 63.5
Eucgr.C04007 Eucalyptus grandis HOM05D006939 ORTHO05D008616 8.4e-109 397.9 322 65.2
Medtr3g108805 Medicago truncatula HOM05D006939 ORTHO05D008616 1.9e-108 396.7 323 64.4
Nitab4.5_0006135g0050 Nicotiana tabacum HOM05D006939 ORTHO05D008616 1.9e-108 396.7 290 69.7
vmacro04127 Vaccinium macrocarpon HOM05D006939 ORTHO05D008616 2.5e-108 396.4 285 70.5
MBI16_g38081_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 4.2e-108 395.6 336 61.3
Potri.018G005900 Populus trichocarpa HOM05D006939 ORTHO05D008616 5.5e-108 395.2 328 62.8
Aqoxy7G02987 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 9.3e-108 394.4 335 61.8
ECA240G2907 Erigeron canadensis HOM05D006939 ORTHO05D008616 9.3e-108 394.4 320 64.1
Sed0018205 Sechium edule HOM05D006939 ORTHO05D008616 1.0e-106 391.0 328 63.4
Sabra18G0011600 Salix brachista HOM05D006939 ORTHO05D008616 1.3e-106 390.6 328 61.9
Sabra18G0014100 Salix brachista HOM05D006939 ORTHO05D008616 1.3e-106 390.6 328 61.9
Prupe.1G460400 Prunus persica HOM05D006939 ORTHO05D008616 3.0e-106 389.4 332 59.3
PGR044G1028 Punica granatum HOM05D006939 ORTHO05D008616 6.7e-106 388.3 321 64.2
CANSAT25G1759 Cannabis sativa HOM05D006939 ORTHO05D008616 8.7e-106 387.9 342 59.9
unitig_61.g26486 Utricularia gibba HOM05D006939 ORTHO05D008616 8.7e-106 387.9 330 63.0
PSO063G0559 Papaver somniferum HOM05D006939 ORTHO05D008616 7.4e-105 384.8 332 60.8
PSO170G5391 Papaver somniferum HOM05D006939 ORTHO05D008616 7.4e-105 384.8 332 60.8
RcHm_v2.0_Chr6g0304951 Rosa chinensis HOM05D006939 ORTHO05D008616 1.4e-103 380.6 318 61.9
HPP92_017403 Vanilla planifolia HOM05D006939 ORTHO05D008616 1.8e-103 380.2 331 59.8
Lj8C69T1 Lonicera japonica HOM05D006939 ORTHO05D008616 6.9e-103 378.3 331 62.5
Psat5g025040 Pisum sativum HOM05D006939 ORTHO05D008616 2.6e-102 376.3 315 63.5
Zm00001eb048210 Zea mays HOM05D006939 ORTHO05D008616 2.6e-102 376.3 304 60.9
Oeu040447.1 Olea europaea HOM05D006939 ORTHO05D008616 3.4e-102 375.9 277 68.2
MD15G1108100 Malus domestica HOM05D006939 ORTHO05D008616 4.5e-102 375.6 319 60.2
ClCG08G012690 Citrullus lanatus HOM05D006939 ORTHO05D008616 1.1e-100 370.9 331 62.2
DCAR_015445 Daucus carota HOM05D006939 ORTHO05D008616 1.1e-100 370.9 320 62.2
SGA_v2.0_scaffold49G18392 Striga asiatica HOM05D002257 ORTHO05D008616 1.4e-100 370.5 333 59.2
Rhsim13G0217600 Rhododendron simsii HOM05D006939 ORTHO05D008616 1.2e-99 367.5 399 52.9
Sp6g32750 Schrenkiella parvula HOM05D006939 ORTHO05D008616 1.6e-99 367.1 320 61.2
CARHR202610 Cardamine hirsuta HOM05D006939 ORTHO05D008616 4.6e-99 365.5 313 61.7
BcaB01g06272 Brassica carinata HOM05D006939 ORTHO05D008616 6.1e-99 365.2 309 61.5
C03p05420 Brassica napus HOM05D006939 ORTHO05D008616 1.8e-98 363.6 318 60.1
A03p04710 Brassica napus HOM05D006939 ORTHO05D008616 3.0e-98 362.8 319 60.5
Carub.0006s0918 Capsella rubella HOM05D006939 ORTHO05D008616 3.0e-98 362.8 320 61.2
CDE02G0224 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 6.7e-98 361.7 308 60.1
BcaB01g05506 Brassica carinata HOM05D006939 ORTHO05D008616 1.1e-97 360.9 318 59.7
FAN20G0593 Fragaria x ananassa HOM05D006939 ORTHO05D008616 1.9e-97 360.1 318 60.1
AL6G21250 Arabidopsis lyrata HOM05D006939 ORTHO05D008616 2.5e-97 359.8 320 59.1
ATR0580G399 Amborella trichopoda HOM05D006939 ORTHO05D008616 3.3e-97 359.4 328 57.0
BraA03t09811Z Brassica rapa HOM05D006939 ORTHO05D008616 3.3e-97 359.4 318 59.4
DCAR_026761 Daucus carota HOM05D006939 ORTHO05D008616 4.3e-97 359.0 304 63.2
FvH4_2g36790 Fragaria vesca HOM05D006939 ORTHO05D008616 5.7e-97 358.6 309 60.8
FAN27G1343 Fragaria x ananassa HOM05D006939 ORTHO05D008616 7.4e-97 358.2 318 59.7
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 1.3e-96 357.5 312 60.3
Cfa013266 Carpinus fangiana HOM05D006939 ORTHO05D008616 1.3e-96 357.5 267 70.8
Aa31LG3G16420 Aethionema arabicum HOM05D006939 ORTHO05D008616 1.6e-96 357.1 327 58.7
EL10Ac2g03752 Beta vulgaris HOM05D006939 ORTHO05D008616 1.2e-94 350.9 321 59.2
CiPaw.08G019500 Carya illinoinensis HOM05D006939 ORTHO05D008616 1.0e-93 347.8 321 59.5
Nitab4.5_0001255g0030 Nicotiana tabacum HOM05D006939 ORTHO05D008616 3.2e-92 342.8 281 64.8
Haze_21731 Corylus avellana HOM05D006939 ORTHO05D008616 9.4e-92 341.3 256 68.8
EL10Ac5g10928 Beta vulgaris HOM05D006939 ORTHO05D008616 1.8e-87 327.0 270 63.7
FAN15G1628 Fragaria x ananassa HOM05D006939 ORTHO05D008616 3.1e-87 326.2 308 57.1
Thhalv10014111m.g Eutrema salsugineum HOM05D006939 ORTHO05D008616 5.9e-86 322.0 326 56.1
AT5G10710 Arabidopsis thaliana HOM05D006939 ORTHO05D008616 5.2e-82 308.9 318 53.8
Lsat_1_v5_gn_5_46220 Lactuca sativa HOM05D006939 ORTHO05D008616 3.2e-76 289.7 318 53.8
Phvul.009G101000 Phaseolus vulgaris HOM05D006939 ORTHO05D008616 4.7e-75 285.8 208 68.3
SHI21120 Sapria himalayana HOM05D006939 ORTHO05D008616 1.5e-44 184.5 222 48.6
MD08G1128700 Malus domestica HOM05D006939 ORTHO05D008616 6.4e-40 169.1 183 50.3
Mapoly0042s0046 Marchantia polymorpha HOM05D006939 ORTHO05D008616 7.0e-39 165.6 303 36.6
Pp3c6_9310 Physcomitrium patens HOM05D006939 ORTHO05D008616 7.0e-39 165.6 306 32.0
Aqoxy3G02235 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 1.5e-36 157.9 154 55.2
AagrBONN_evm.TU.Sc2ySwM_228.595 Anthoceros agrestis HOM05D006939 ORTHO05D008616 2.5e-36 157.1 322 34.2
SMO119G0385 Selaginella moellendorffii HOM05D006939 ORTHO05D008616 1.8e-34 151.0 273 33.3
AagrBONN_evm.TU.Sc2ySwM_344.1051 Anthoceros agrestis HOM05D006939 ORTHO05D008616 3.1e-34 150.2 319 32.9
Pp3c5_16590 Physcomitrium patens HOM05D006939 ORTHO05D008616 2.6e-33 147.1 262 31.7
BcaB01g06274 Brassica carinata HOM05D006939 ORTHO05D008616 1.2e-30 138.3 126 58.7
MBI16_g27300_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 2.8e-27 127.1 141 53.2
Aqoxy1G02501 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 8.1e-27 125.6 245 37.1
CDE05G2180 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 1.2e-22 111.7 135 48.9
Os04g0284100 Oryza sativa ssp. japonica HOM05D006939 ORTHO05D008616 2.3e-21 107.5 71 74.6
COL.COLO4_19037 Corchorus olitorius HOM05D000039 ORTHO05D000870 4.2e-15 86.7 113 46.0


User provided reference genes

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