Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24456 Striga asiatica HOM05D005930 ORTHO05D003423 1.1e-159 566.6 293 100.0
SGA_v2.0_scaffold73G24459 Striga asiatica HOM05D005930 ORTHO05D003423 1.5e-68 263.8 147 89.1
SGA_v2.0_scaffold286G47142 Striga asiatica HOM05D005930 ORTHO05D003423 6.6e-64 248.4 201 71.6
SGA_v2.0_scaffold286G47138 Striga asiatica HOM05D005930 ORTHO05D003423 6.6e-56 221.9 204 66.7
SGA_v2.0_scaffold42G16053 Striga asiatica HOM05D005930 ORTHO05D003423 3.3e-55 219.5 182 65.9
SGA_v2.0_scaffold37G14898 Striga asiatica HOM05D005930 ORTHO05D003423 6.2e-54 215.3 196 62.8
SGA_v2.0_scaffold286G47140 Striga asiatica HOM05D005930 ORTHO05D003423 8.1e-54 214.9 204 62.7
SGA_v2.0_scaffold37G14882 Striga asiatica HOM05D005930 ORTHO05D003423 1.5e-52 210.7 171 65.5
SGA_v2.0_scaffold37G14933 Striga asiatica HOM05D005930 ORTHO05D003423 2.0e-52 210.3 183 63.4
SGA_v2.0_scaffold51G18809 Striga asiatica HOM05D005930 ORTHO05D003423 9.9e-52 208.0 190 61.6
SGA_v2.0_scaffold37G14880 Striga asiatica HOM05D005930 ORTHO05D003423 1.9e-50 203.8 199 56.3
SGA_v2.0_scaffold51G18815 Striga asiatica HOM05D005930 ORTHO05D003423 1.6e-49 200.7 193 63.7
SGA_v2.0_scaffold37G14895 Striga asiatica HOM05D005930 ORTHO05D003423 4.6e-49 199.1 185 60.0
SGA_v2.0_scaffold37G14878 Striga asiatica HOM05D005930 ORTHO05D003423 1.3e-48 197.6 182 62.6
SGA_v2.0_scaffold37G14890 Striga asiatica HOM05D005930 ORTHO05D003423 5.1e-48 195.7 186 66.1
SGA_v2.0_scaffold37G14876 Striga asiatica HOM05D005930 ORTHO05D003423 3.3e-47 193.0 171 62.0
SGA_v2.0_scaffold51G18873 Striga asiatica HOM05D005930 ORTHO05D003423 1.3e-46 191.0 181 60.8
SGA_v2.0_scaffold51G18812 Striga asiatica HOM05D005930 ORTHO05D003423 4.0e-45 186.0 174 58.6
SGA_v2.0_scaffold51G18865 Striga asiatica HOM05D005930 ORTHO05D003423 9.9e-44 181.4 147 65.3
SGA_v2.0_scaffold51G18869 Striga asiatica HOM05D005930 ORTHO05D003423 1.6e-41 174.1 246 45.1
SGA_v2.0_scaffold286G47144 Striga asiatica HOM05D005930 ORTHO05D003423 3.3e-39 166.4 184 53.3
SGA_v2.0_scaffold51G18817 Striga asiatica HOM05D005930 ORTHO05D003423 4.0e-37 159.5 174 52.9
SGA_v2.0_scaffold51G18811 Striga asiatica HOM05D005930 ORTHO05D003423 7.6e-36 155.2 148 60.1
SGA_v2.0_scaffold51G18814 Striga asiatica HOM05D005930 ORTHO05D003423 1.1e-34 151.4 149 58.4
SGA_v2.0_scaffold37G14879 Striga asiatica HOM05D005930 ORTHO05D003423 9.3e-34 148.3 201 49.3
SGA_v2.0_scaffold51G18880 Striga asiatica HOM05D000126 ORTHO05D003423 6.0e-33 145.6 107 71.0
SGA_v2.0_scaffold51G18820 Striga asiatica HOM05D000126 ORTHO05D000085 1.8e-32 144.1 141 58.2
Migut.O00405 Erythranthe guttata HOM05D005930 ORTHO05D003423 5.5e-18 95.9 169 36.7
Migut.E00914 Erythranthe guttata HOM05D005930 ORTHO05D003423 2.7e-17 93.6 258 30.2
Migut.E00956 Erythranthe guttata HOM05D005930 ORTHO05D003423 3.6e-17 93.2 218 32.1
Migut.E01603 Erythranthe guttata HOM05D005930 ORTHO05D003423 1.0e-16 91.7 212 31.1
Migut.E00557 Erythranthe guttata HOM05D005930 ORTHO05D003423 3.3e-15 86.7 167 35.3
Migut.E00539 Erythranthe guttata HOM05D005930 ORTHO05D003423 9.7e-15 85.1 159 31.4
Migut.E00533 Erythranthe guttata HOM05D005930 ORTHO05D003423 1.3e-14 84.7 172 33.7
Migut.E00928 Erythranthe guttata HOM05D005930 ORTHO05D003423 4.8e-14 82.8 182 30.8
Migut.O00973 Erythranthe guttata HOM05D005930 ORTHO05D003423 4.8e-14 82.8 182 30.8
Migut.E00919 Erythranthe guttata HOM05D005930 ORTHO05D003423 6.3e-14 82.4 236 30.5
Migut.E00509 Erythranthe guttata HOM05D005930 ORTHO05D003423 8.2e-14 82.0 192 28.6
Migut.E00554 Erythranthe guttata HOM05D005930 ORTHO05D003423 1.1e-13 81.6 184 31.5
Migut.E00605 Erythranthe guttata HOM05D005930 ORTHO05D003423 1.1e-13 81.6 178 32.0
Migut.L00602 Erythranthe guttata HOM05D005930 ORTHO05D003423 1.1e-13 81.6 284 26.4
Migut.E00523 Erythranthe guttata HOM05D005930 ORTHO05D003423 1.4e-13 81.3 213 28.2
Migut.E00531 Erythranthe guttata HOM05D005930 ORTHO05D003423 1.8e-13 80.9 211 29.4
SGA_v2.0_scaffold37G14907 Striga asiatica HOM05D005930 ORTHO05D003423 6.9e-13 79.0 203 29.1
Migut.E00513 Erythranthe guttata HOM05D005930 ORTHO05D003423 9.1e-13 78.6 192 29.2
Migut.E00546 Erythranthe guttata HOM05D005930 ORTHO05D003423 4.5e-12 76.3 162 31.5
Migut.E01658 Erythranthe guttata HOM05D005930 ORTHO05D003423 4.5e-12 76.3 169 32.0
Migut.E00547 Erythranthe guttata HOM05D005930 ORTHO05D003423 7.7e-12 75.5 169 30.2
Migut.E00552 Erythranthe guttata HOM05D005930 ORTHO05D003423 7.7e-12 75.5 258 26.7
Migut.E00521 Erythranthe guttata HOM05D005930 ORTHO05D003423 1.0e-11 75.1 188 29.3
Migut.E00530 Erythranthe guttata HOM05D005930 ORTHO05D003423 1.7e-11 74.3 162 30.9
SGA_v2.0_scaffold12G06246 Striga asiatica HOM05D005930 ORTHO05D003423 1.7e-11 74.3 185 34.1
Haze_15913 Corylus avellana HOM05D001477 ORTHO05D001182 2.9e-11 73.6 136 31.6
Migut.E00545 Erythranthe guttata HOM05D005930 ORTHO05D003423 6.5e-11 72.4 145 33.1
Migut.E00825 Erythranthe guttata HOM05D005930 ORTHO05D003423 6.5e-11 72.4 174 31.0
Migut.G00768 Erythranthe guttata HOM05D005930 ORTHO05D003423 6.5e-11 72.4 145 34.5
Migut.L00832 Erythranthe guttata HOM05D005930 ORTHO05D003423 6.5e-11 72.4 155 29.7
Cfa003613 Carpinus fangiana HOM05D001477 ORTHO05D001182 8.5e-11 72.0 136 30.1
Migut.E00826 Erythranthe guttata HOM05D005930 ORTHO05D003423 3.2e-10 70.1 172 29.1
Migut.G01133 Erythranthe guttata HOM05D005930 ORTHO05D003423 3.2e-10 70.1 242 27.7
Migut.L00646 Erythranthe guttata HOM05D005930 ORTHO05D003423 7.2e-10 68.9 155 29.0
Migut.E00518 Erythranthe guttata HOM05D005930 ORTHO05D003423 9.4e-10 68.6 161 31.7
Migut.L00997 Erythranthe guttata HOM05D005930 ORTHO05D003423 9.4e-10 68.6 210 26.2
Ciclev10025305m.g Citrus clementina HOM05D001477 ORTHO05D001182 1.2e-09 68.2 138 30.4
Migut.E00555 Erythranthe guttata HOM05D005930 ORTHO05D003423 1.2e-09 68.2 152 31.6
Migut.E00832 Erythranthe guttata HOM05D005930 ORTHO05D003423 1.2e-09 68.2 146 30.1
Migut.E01608 Erythranthe guttata HOM05D005930 ORTHO05D003423 1.6e-09 67.8 184 30.4
Migut.O00331 Erythranthe guttata HOM05D005930 ORTHO05D003423 1.6e-09 67.8 174 30.5
Migut.E00536 Erythranthe guttata HOM05D005930 ORTHO05D003423 2.1e-09 67.4 178 30.9
Migut.E00511 Erythranthe guttata HOM05D005930 ORTHO05D003423 4.7e-09 66.2 153 30.7
Migut.E00519 Erythranthe guttata HOM05D005930 ORTHO05D003423 4.7e-09 66.2 153 30.7
Migut.E00544 Erythranthe guttata HOM05D005930 ORTHO05D003423 4.7e-09 66.2 180 28.9
Migut.L00648 Erythranthe guttata HOM05D005930 ORTHO05D003423 4.7e-09 66.2 155 28.4
Nn4g26661 Nelumbo nucifera HOM05D001396 ORTHO05D000493 6.1e-09 65.9 139 30.9
CSS0038081 Camellia sinensis var. sinensis HOM05D001477 ORTHO05D001182 7.9e-09 65.5 140 30.0
Migut.E00606 Erythranthe guttata HOM05D005930 ORTHO05D003423 7.9e-09 65.5 189 32.3
Migut.E00915 Erythranthe guttata HOM05D005930 ORTHO05D003423 7.9e-09 65.5 159 32.1
Migut.E00949 Erythranthe guttata HOM05D005930 ORTHO05D003423 7.9e-09 65.5 155 31.6
PGSC0003DMG400018867 Solanum tuberosum HOM05D006683 ORTHO05D008629 7.9e-09 65.5 149 28.9
Migut.E00952 Erythranthe guttata HOM05D005930 ORTHO05D003423 1.8e-08 64.3 102 36.3
Potri.001G395000 Populus trichocarpa HOM05D001477 ORTHO05D001182 1.8e-08 64.3 159 29.6
Migut.E00516 Erythranthe guttata HOM05D005930 ORTHO05D003423 2.3e-08 63.9 153 29.4
Manes.11G029400 Manihot esculenta HOM05D001477 ORTHO05D001182 2.3e-08 63.9 136 28.7
Migut.E00548 Erythranthe guttata HOM05D005930 ORTHO05D003423 3.0e-08 63.5 126 34.1
Migut.E00596 Erythranthe guttata HOM05D005930 ORTHO05D003423 3.9e-08 63.2 132 34.1
Nitab4.5_0002423g0050 Nicotiana tabacum HOM05D012574 ORTHO05D001182 3.9e-08 63.2 166 25.3
Migut.E00824 Erythranthe guttata HOM05D005930 ORTHO05D003423 5.1e-08 62.8 157 28.7
Migut.G00769 Erythranthe guttata HOM05D005930 ORTHO05D003423 5.1e-08 62.8 144 29.2
Nitab4.5_0000306g0260 Nicotiana tabacum HOM05D006683 ORTHO05D008629 5.1e-08 62.8 197 26.9
FAN24G1808 Fragaria x ananassa HOM05D000312 ORTHO05D000221 6.7e-08 62.4 94 37.2
QL11p055690 Quercus lobata HOM05D001477 ORTHO05D001182 6.7e-08 62.4 157 26.1
PGSC0003DMG400042529 Solanum tuberosum HOM05D006683 ORTHO05D008629 6.7e-08 62.4 201 26.4
Rhsim06G0150600 Rhododendron simsii HOM05D001396 ORTHO05D000493 8.8e-08 62.0 138 29.0
Migut.A00971 Erythranthe guttata HOM05D005930 ORTHO05D003423 1.1e-07 61.6 153 28.8
Haze_18985 Corylus avellana HOM05D001477 ORTHO05D001182 1.5e-07 61.2 137 25.5
Dinv23707 Davidia involucrata HOM05D001396 ORTHO05D000493 1.5e-07 61.2 121 29.8
Migut.E00551 Erythranthe guttata HOM05D005930 ORTHO05D003423 1.5e-07 61.2 161 28.6
FvH4_2g27100 Fragaria vesca HOM05D000312 ORTHO05D000221 1.5e-07 61.2 94 37.2
RcHm_v2.0_Chr2g0142131 Rosa chinensis HOM05D001477 ORTHO05D001182 1.5e-07 61.2 136 26.5
Migut.E00543 Erythranthe guttata HOM05D005930 ORTHO05D003423 2.6e-07 60.5 145 29.7
Migut.E00550 Erythranthe guttata HOM05D005930 ORTHO05D003423 2.6e-07 60.5 214 27.1
Aqoxy7G01133 Aquilegia oxysepala HOM05D001396 ORTHO05D000493 3.3e-07 60.1 118 29.7
Migut.E00561 Erythranthe guttata HOM05D005930 ORTHO05D003423 3.3e-07 60.1 149 32.2
Migut.L01024 Erythranthe guttata HOM05D005930 ORTHO05D003423 3.3e-07 60.1 180 26.7
Ciclev10026961m.g Citrus clementina HOM05D001477 ORTHO05D001182 4.4e-07 59.7 152 28.3
Dinv15484 Davidia involucrata HOM05D001396 ORTHO05D000493 4.4e-07 59.7 121 26.4
FAN02G0832 Fragaria x ananassa HOM05D000862 ORTHO05D001182 4.4e-07 59.7 132 28.0
FAN02G0884 Fragaria x ananassa HOM05D001477 ORTHO05D001182 4.4e-07 59.7 132 28.0
SGA_v2.0_scaffold3G01569 Striga asiatica HOM05D001396 ORTHO05D000493 4.4e-07 59.7 106 29.2
SGA_v2.0_scaffold835G53654 Striga asiatica HOM05D001396 ORTHO05D000493 4.4e-07 59.7 106 29.2
Cfa020769 Carpinus fangiana HOM05D001477 ORTHO05D001182 5.7e-07 59.3 197 27.4
Migut.E00515 Erythranthe guttata HOM05D005930 ORTHO05D003423 5.7e-07 59.3 168 28.6
Migut.E00795 Erythranthe guttata HOM05D005930 ORTHO05D003423 5.7e-07 59.3 153 27.5
Peaxi162Scf00038g01239 Petunia axillaris HOM05D001477 ORTHO05D001182 5.7e-07 59.3 136 25.0
A01p03150 Brassica napus HOM05D002909 ORTHO05D000493 7.4e-07 58.9 136 31.6
BraA01t00300Z Brassica rapa HOM05D002909 ORTHO05D000493 7.4e-07 58.9 136 31.6
Migut.E00141 Erythranthe guttata HOM05D005930 ORTHO05D003423 7.4e-07 58.9 168 26.8
Potri.001G420500 Populus trichocarpa HOM05D003087 ORTHO05D003312 7.4e-07 58.9 112 33.0
Sopen08g005830 Solanum pennellii HOM05D001396 ORTHO05D000001 7.4e-07 58.9 108 28.7
Haze_03787 Corylus avellana HOM05D001477 ORTHO05D001182 1.3e-06 58.2 205 24.4
Migut.E00560 Erythranthe guttata HOM05D005930 ORTHO05D003423 1.3e-06 58.2 149 30.9
Migut.E00597 Erythranthe guttata HOM05D005930 ORTHO05D003423 1.3e-06 58.2 146 29.5
Migut.G01021 Erythranthe guttata HOM05D005930 ORTHO05D003423 1.3e-06 58.2 155 27.7
Peaxi162Scf00650g00312 Petunia axillaris HOM05D001396 ORTHO05D000493 1.3e-06 58.2 144 26.4
PGSC0003DMG400018866 Solanum tuberosum HOM05D006683 ORTHO05D008629 1.3e-06 58.2 156 27.6
SGA_v2.0_scaffold3G01573 Striga asiatica HOM05D001396 ORTHO05D000493 1.3e-06 58.2 105 27.6
Dinv39819 Davidia involucrata HOM05D001396 ORTHO05D000493 1.7e-06 57.8 122 27.9
PGSC0003DMG400035387 Solanum tuberosum HOM05D006683 ORTHO05D008629 2.2e-06 57.4 162 29.0
Cfa020687 Carpinus fangiana HOM05D001477 ORTHO05D001182 2.8e-06 57.0 105 28.6
ECA233G2529 Erigeron canadensis HOM05D000211 ORTHO05D002517 2.8e-06 57.0 162 27.2
Potri.012G099400 Populus trichocarpa HOM05D001477 ORTHO05D001182 2.8e-06 57.0 139 29.5
PGSC0003DMG400037968 Solanum tuberosum HOM05D006683 ORTHO05D008629 2.8e-06 57.0 141 30.5
AT1G78740 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 3.7e-06 56.6 156 30.1
Migut.E00535 Erythranthe guttata HOM05D005930 ORTHO05D003423 3.7e-06 56.6 216 24.5
Eucgr.C04385 Eucalyptus grandis HOM05D001396 ORTHO05D000493 3.7e-06 56.6 103 24.3
FAN05G3307 Fragaria x ananassa HOM05D000862 ORTHO05D000943 3.7e-06 56.6 132 27.3
Nitab4.5_0000306g0290 Nicotiana tabacum HOM05D006683 ORTHO05D008629 3.7e-06 56.6 143 29.4
QL05p010063 Quercus lobata HOM05D001477 ORTHO05D001182 3.7e-06 56.6 142 26.8
PGSC0003DMG400003800 Solanum tuberosum HOM05D006683 ORTHO05D008629 3.7e-06 56.6 100 38.0
PGSC0003DMG400041893 Solanum tuberosum HOM05D006683 ORTHO05D008629 3.7e-06 56.6 147 28.6
ECA247G1279 Erigeron canadensis HOM05D001477 ORTHO05D001182 4.8e-06 56.2 133 30.1
Migut.E01600 Erythranthe guttata HOM05D005930 ORTHO05D003423 4.8e-06 56.2 108 31.5
Nitab4.5_0004698g0030 Nicotiana tabacum HOM05D006683 ORTHO05D008629 4.8e-06 56.2 177 24.3
CAN.G500.84 Capsicum annuum HOM05D006683 ORTHO05D008629 6.3e-06 55.8 151 28.5
CAN.G500.88 Capsicum annuum HOM05D006683 ORTHO05D008629 6.3e-06 55.8 151 28.5
COL.COLO4_23029 Corchorus olitorius HOM05D000576 ORTHO05D000368 6.3e-06 55.8 147 32.0
FAN15G3436 Fragaria x ananassa HOM05D000312 ORTHO05D000221 6.3e-06 55.8 115 30.4
Peaxi162Scf00650g00037 Petunia axillaris HOM05D001396 ORTHO05D000493 6.3e-06 55.8 104 28.8
Peaxi162Scf01415g00033 Petunia axillaris HOM05D001396 ORTHO05D000493 6.3e-06 55.8 106 28.3
TPR.G2652 Trifolium pratense HOM05D000312 ORTHO05D000221 6.3e-06 55.8 151 31.8
TAR371G0526 Trochodendron aralioides HOM05D000576 ORTHO05D000368 6.3e-06 55.8 153 30.7
CAN.G1181.31 Capsicum annuum HOM05D001396 ORTHO05D000493 8.2e-06 55.5 107 24.3
CAN.G1690.10 Capsicum annuum HOM05D006683 ORTHO05D008629 8.2e-06 55.5 144 28.5
DCAR_012983 Daucus carota HOM05D001396 ORTHO05D000493 8.2e-06 55.5 114 28.1
Peaxi162Scf00045g00449 Petunia axillaris HOM05D001396 ORTHO05D000493 8.2e-06 55.5 105 27.6


User provided reference genes

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