Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24393 Striga asiatica HOM05D006832 ORTHO05D008292 6.2e-191 670.6 338 100.0
MSTRG.14973 Avicennia marina HOM05D006832 ORTHO05D008292 2.3e-44 183.7 258 46.1
MSTRG.6686 Avicennia marina HOM05D006832 ORTHO05D008292 1.1e-43 181.4 287 43.9
Migut.M00714 Erythranthe guttata HOM05D006832 ORTHO05D008292 2.6e-43 180.3 311 43.4
Dinv15008 Davidia involucrata HOM05D006832 ORTHO05D008292 4.4e-35 152.9 295 37.3
Actinidia03616 Actinidia chinensis HOM05D006832 ORTHO05D008292 5.3e-33 146.0 300 37.7
Sopen10g003390 Solanum pennellii HOM05D006832 ORTHO05D008292 2.0e-32 144.1 308 33.1
Rhsim04G0036900 Rhododendron simsii HOM05D006832 ORTHO05D008292 1.0e-31 141.7 290 36.6
Solyc10g007440.3 Solanum lycopersicum HOM05D006832 ORTHO05D008292 1.0e-31 141.7 308 33.1
Cpa.g.sc77.49 Carica papaya HOM05D006832 ORTHO05D008292 6.5e-31 139.0 258 37.6
Rhsim04G0036600 Rhododendron simsii HOM05D006832 ORTHO05D008292 8.5e-31 138.7 304 35.9
RhsimUnG0013300 Rhododendron simsii HOM05D006832 ORTHO05D008292 3.2e-30 136.7 290 35.9
Manes.15G097000 Manihot esculenta HOM05D006832 ORTHO05D008292 1.2e-29 134.8 283 34.3
CsaV3_4G032920 Cucumis sativus L. HOM05D006832 ORTHO05D008292 6.1e-29 132.5 162 42.6
ClCG11G017270 Citrullus lanatus HOM05D006832 ORTHO05D008292 1.4e-28 131.3 182 40.1
Nitab4.5_0000383g0030 Nicotiana tabacum HOM05D006832 ORTHO05D008292 1.4e-28 131.3 205 38.0
Peaxi162Scf00692g00121 Petunia axillaris HOM05D006832 ORTHO05D008292 1.4e-28 131.3 246 35.8
TAR627G1032 Trochodendron aralioides HOM05D006832 ORTHO05D008292 1.4e-28 131.3 297 33.7
Eucgr.F03237 Eucalyptus grandis HOM05D006832 ORTHO05D008292 1.8e-28 131.0 315 34.0
MELO3C025659.2 Cucumis melo HOM05D006832 ORTHO05D008292 2.3e-28 130.6 182 40.7
Dinv18383 Davidia involucrata HOM05D000051 ORTHO05D008292 5.2e-28 129.4 256 35.9
GSVIVG01014166001 Vitis vinifera HOM05D006832 ORTHO05D008292 8.8e-28 128.6 328 31.4
unitig_899.g15298 Utricularia gibba HOM05D006832 ORTHO05D008292 1.2e-27 128.3 339 32.2
Gorai.013G174800 Gossypium raimondii HOM05D006832 ORTHO05D008292 1.5e-27 127.9 310 32.6
CiPaw.11G157300 Carya illinoinensis HOM05D006832 ORTHO05D008292 7.5e-27 125.6 188 39.9
Sopen10g003400 Solanum pennellii HOM05D006832 ORTHO05D008292 1.3e-26 124.8 284 33.1
Sed0018751 Sechium edule HOM05D006832 ORTHO05D008292 1.7e-26 124.4 182 39.0
Cc05_g10910 Coffea canephora HOM05D006832 ORTHO05D008292 2.2e-26 124.0 296 30.7
Thecc.07G123300 Theobroma cacao HOM05D006832 ORTHO05D008292 2.2e-26 124.0 284 32.4
PGSC0003DMG403021297 Solanum tuberosum HOM05D006832 ORTHO05D008292 2.8e-26 123.6 287 31.7
Nn3g21068 Nelumbo nucifera HOM05D006832 ORTHO05D008292 4.8e-26 122.9 283 32.5
Solyc10g007460.4 Solanum lycopersicum HOM05D006832 ORTHO05D008292 4.8e-26 122.9 284 32.7
Potri.001G376900 Populus trichocarpa HOM05D006832 ORTHO05D008292 8.2e-26 122.1 295 31.9
ECA240G3607 Erigeron canadensis HOM05D000109 ORTHO05D000210 1.1e-25 121.7 257 35.0
DCAR_013268 Daucus carota HOM05D006832 ORTHO05D008292 1.4e-25 121.3 294 33.0
CANSAT56G2937 Cannabis sativa HOM05D006832 ORTHO05D008292 2.4e-25 120.6 316 31.3
Cfa019523 Carpinus fangiana HOM05D006832 ORTHO05D008292 3.1e-25 120.2 182 40.1
Sabra16G0248300 Salix brachista HOM05D006832 ORTHO05D008292 3.1e-25 120.2 298 32.6
Sc16g0007700 Simmondsia chinensis HOM05D006832 ORTHO05D008292 4.1e-25 119.8 289 31.8
Gohir.D13G154700 Gossypium hirsutum HOM05D006832 ORTHO05D008292 7.0e-25 119.0 310 31.3
Lsat_1_v5_gn_9_100561 Lactuca sativa HOM05D006832 ORTHO05D008292 9.1e-25 118.6 303 30.0
Gohir.A13G150400 Gossypium hirsutum HOM05D006832 ORTHO05D008292 3.5e-24 116.7 303 32.0
FvH4_3g18000 Fragaria vesca HOM05D006832 ORTHO05D008292 1.3e-23 114.8 287 32.4
RcHm_v2.0_Chr5g0030051 Rosa chinensis HOM05D006832 ORTHO05D008292 1.3e-23 114.8 315 30.5
PGR031G1976 Punica granatum HOM05D006832 ORTHO05D008292 2.2e-23 114.0 312 30.8
FAN11G1423 Fragaria x ananassa HOM05D000051 ORTHO05D008292 5.0e-23 112.8 276 32.6
FAN21G3714 Fragaria x ananassa HOM05D006832 ORTHO05D008292 1.1e-22 111.7 316 31.3
MD03G1246100 Malus domestica HOM05D006832 ORTHO05D008292 1.5e-22 111.3 251 34.3
ATR0127G025 Amborella trichopoda HOM05D006832 ORTHO05D008292 3.2e-22 110.2 298 30.9
Ciclev10020819m.g Citrus clementina HOM05D006832 ORTHO05D008292 3.2e-22 110.2 268 32.1
Atru.chr2.2055_Atru.chr2.2057 Acer truncatum HOM05D006832 ORTHO05D008292 4.2e-22 109.8 262 34.4
CARHR043680 Cardamine hirsuta HOM05D006832 ORTHO05D008292 4.2e-22 109.8 261 31.8
SHI27646 Sapria himalayana HOM05D006832 ORTHO05D008292 2.7e-21 107.1 211 31.3
TWI38G0771 Tripterygium wilfordii HOM05D006832 ORTHO05D008292 2.7e-21 107.1 290 29.3
MBI07_g00466_MAGBIO Magnolia biondii HOM05D006832 ORTHO05D008292 4.7e-21 106.3 341 27.9
THA.LOC104810427 Tarenaya hassleriana HOM05D006832 ORTHO05D008292 4.7e-21 106.3 279 32.3
Carub.0001s4265 Capsella rubella HOM05D006832 ORTHO05D008292 1.4e-20 104.8 163 36.2
BcaB04g17079 Brassica carinata HOM05D006832 ORTHO05D008292 1.8e-20 104.4 276 29.3
Thhalv10011680m.g Eutrema salsugineum HOM05D006832 ORTHO05D008292 1.8e-20 104.4 294 31.0
Gohir.D11G305300 Gossypium hirsutum HOM05D006832 ORTHO05D008292 1.8e-20 104.4 154 37.0
BcaC01g01392 Brassica carinata HOM05D006832 ORTHO05D008292 3.0e-20 103.6 255 31.4
Gohir.A11G287600 Gossypium hirsutum HOM05D006832 ORTHO05D008292 3.0e-20 103.6 154 37.0
AT1G53460 Arabidopsis thaliana HOM05D006832 ORTHO05D008292 5.2e-20 102.8 163 35.6
Gohir.A11G288300 Gossypium hirsutum HOM05D006832 ORTHO05D008292 5.2e-20 102.8 263 30.0
Prupe.4G158600 Prunus persica HOM05D006832 ORTHO05D008292 6.8e-20 102.4 162 35.8
Solyc12g044440.2 Solanum lycopersicum HOM05D006832 ORTHO05D008292 6.8e-20 102.4 76 56.6
Aa31LG10G1740 Aethionema arabicum HOM05D006832 ORTHO05D008292 8.8e-20 102.1 163 36.2
BraA08t32210Z Brassica rapa HOM05D006832 ORTHO05D008292 1.2e-19 101.7 267 30.3
A08p01560 Brassica napus HOM05D006832 ORTHO05D008292 1.5e-19 101.3 260 30.8
C03p91530 Brassica napus HOM05D006832 ORTHO05D008292 2.0e-19 100.9 250 31.6
BolC3t21470H Brassica oleracea HOM05D006832 ORTHO05D008292 2.0e-19 100.9 250 31.6
SalBow8G1352 Salvia bowleyana HOM05D006832 ORTHO05D008292 2.6e-19 100.5 288 32.3
Os01g0203300 Oryza sativa ssp. japonica HOM05D006832 ORTHO05D008292 4.4e-19 99.8 154 32.5
Aqoxy4G00218 Aquilegia oxysepala HOM05D006832 ORTHO05D008292 5.7e-19 99.4 204 32.4
Gorai.007G327100 Gossypium raimondii HOM05D006832 ORTHO05D008292 5.7e-19 99.4 269 29.4
HPP92_005191 Vanilla planifolia HOM05D006832 ORTHO05D008292 5.7e-19 99.4 195 33.8
vmacro09407 Vaccinium macrocarpon HOM05D006832 ORTHO05D008292 1.3e-18 98.2 338 29.0
AL1G62020 Arabidopsis lyrata HOM05D006832 ORTHO05D008292 2.2e-18 97.4 287 30.3
SalBow1G6294 Salvia bowleyana HOM05D006832 ORTHO05D008292 2.2e-18 97.4 288 31.9
Zm00001eb120760 Zea mays HOM05D006832 ORTHO05D008292 2.8e-18 97.1 208 29.3
Sp1g40000 Schrenkiella parvula HOM05D006832 ORTHO05D008292 1.4e-17 94.7 292 28.1
arahy.Tifrunner.gnm1.ann1.LUID63 Arachis hypogaea HOM05D006832 ORTHO05D008292 2.4e-17 94.0 176 34.1
Lalb_Chr25g0285711 Lupinus albus HOM05D006832 ORTHO05D008292 2.4e-17 94.0 322 28.9
Aqoxy1G01968 Aquilegia oxysepala HOM05D006832 ORTHO05D008292 4.1e-17 93.2 163 33.7
BraA08t32219Z Brassica rapa HOM05D006832 ORTHO05D008292 4.1e-17 93.2 255 30.2
CSS0031109 Camellia sinensis var. sinensis HOM05D006832 ORTHO05D008292 7.0e-17 92.4 124 41.9
HanXRQChr13g0389661 Helianthus annuus HOM05D006832 ORTHO05D008292 9.1e-17 92.0 137 38.0
Hund10460 Selenicereus undatus HOM05D006832 ORTHO05D008292 1.6e-16 91.3 190 32.6
CSS0020404 Camellia sinensis var. sinensis HOM05D006832 ORTHO05D008292 2.0e-16 90.9 123 40.7
Lj3g0027307 Lotus japonicus HOM05D006832 ORTHO05D008292 2.0e-16 90.9 296 30.1
arahy.Tifrunner.gnm1.ann1.U4EZEG Arachis hypogaea HOM05D006832 ORTHO05D008292 4.5e-16 89.7 250 30.0
CSS0032499 Camellia sinensis var. sinensis HOM05D006832 ORTHO05D008292 1.0e-15 88.6 123 38.2
Nn6g34457 Nelumbo nucifera HOM05D006832 ORTHO05D008292 1.7e-15 87.8 261 29.1
VMungo1080G1450 Vigna mungo HOM05D006832 ORTHO05D008292 1.7e-15 87.8 166 33.1
Psat5g234400 Pisum sativum HOM05D006832 ORTHO05D008292 2.3e-15 87.4 305 26.9
Glyma.13G266700 Glycine max HOM05D006832 ORTHO05D008292 2.9e-15 87.0 259 29.7
Ca_03944_v3 Cicer arietinum L. HOM05D006832 ORTHO05D008292 8.6e-15 85.5 157 34.4
Phvul.005G079500 Phaseolus vulgaris HOM05D006832 ORTHO05D008292 8.6e-15 85.5 260 27.7
QL08p024452 Quercus lobata HOM05D006832 ORTHO05D008292 1.5e-14 84.7 121 38.8
Medtr2g075470 Medicago truncatula HOM05D006832 ORTHO05D008292 7.2e-14 82.4 297 29.6
PGSC0003DMG402021297 Solanum tuberosum HOM05D006832 ORTHO05D008292 1.2e-13 81.6 121 37.2
TPR.G13159 Trifolium pratense HOM05D006832 ORTHO05D008292 2.1e-13 80.9 283 27.2
Oeu021042.1 Olea europaea HOM05D006832 ORTHO05D008292 2.3e-12 77.4 172 34.9
FAN25G0879 Fragaria x ananassa HOM05D006832 ORTHO05D008292 4.0e-12 76.6 134 36.6
Medtr2g075450 Medicago truncatula HOM05D006832 ORTHO05D008292 8.9e-12 75.5 277 23.1
VMungo1080G1649 Vigna mungo HOM05D006832 ORTHO05D008292 8.9e-12 75.5 160 30.6
Sopen12g022760 Solanum pennellii HOM05D006832 ORTHO05D008292 1.5e-11 74.7 119 33.6
A08p01660 Brassica napus HOM05D006832 ORTHO05D008292 7.5e-11 72.4 121 35.5
CDE10G0461 Ceratophyllum demersum HOM05D000680 ORTHO05D000738 1.8e-09 67.8 110 33.6
PGSC0003DMG401021297 Solanum tuberosum HOM05D006832 ORTHO05D008292 5.4e-09 66.2 187 30.5
CAN.G904.32 Capsicum annuum HOM05D006832 ORTHO05D008292 7.8e-08 62.4 167 31.7
HanXRQChr11g0339591 Helianthus annuus HOM05D001845 ORTHO05D001878 5.0e-07 59.7 149 25.5
ECA236G3954 Erigeron canadensis HOM05D001845 ORTHO05D001878 1.9e-06 57.8 191 24.6
MD11G1267100 Malus domestica HOM05D006832 ORTHO05D008292 2.5e-06 57.4 52 46.2
PSO017G4311 Papaver somniferum HOM05D001845 ORTHO05D001878 4.3e-06 56.6 143 26.6
Gohir.A11G265500 Gossypium hirsutum HOM05D001845 ORTHO05D001878 5.6e-06 56.2 121 28.1
Gohir.D11G275700 Gossypium hirsutum HOM05D001845 ORTHO05D001878 5.6e-06 56.2 121 28.1
Gorai.007G297700 Gossypium raimondii HOM05D001845 ORTHO05D001878 7.3e-06 55.8 121 28.1
CiPaw.08G163900 Carya illinoinensis HOM05D001845 ORTHO05D001878 9.5e-06 55.5 125 25.6
Hund07077 Selenicereus undatus HOM05D001845 ORTHO05D001878 9.5e-06 55.5 135 24.4


User provided reference genes

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