Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24380 Striga asiatica HOM05D007501 ORTHO05D009528 1.1e-104 383.3 185 100.0
Oeu059251.1 Olea europaea HOM05D007501 ORTHO05D009528 3.4e-42 175.6 190 53.2
Actinidia03620 Actinidia chinensis HOM05D007501 ORTHO05D009528 6.7e-38 161.4 187 50.8
CSS0000849 Camellia sinensis var. sinensis HOM05D007501 ORTHO05D009528 1.5e-37 160.2 189 49.7
Cc05_g10640 Coffea canephora HOM05D007501 ORTHO05D009528 5.3e-35 151.8 196 45.9
HanXRQChr11g0331231 Helianthus annuus HOM05D007501 ORTHO05D009528 5.9e-34 148.3 192 45.8
Potri.011G103500 Populus trichocarpa HOM05D007501 ORTHO05D009528 7.7e-34 147.9 193 44.0
ECA236G0060 Erigeron canadensis HOM05D007501 ORTHO05D009528 6.5e-33 144.8 187 46.5
Migut.M00689 Erythranthe guttata HOM05D007501 ORTHO05D009528 1.4e-32 143.7 188 50.0
Manes.15G099000 Manihot esculenta HOM05D007501 ORTHO05D009528 3.2e-32 142.5 195 43.6
GSVIVG01014087001 Vitis vinifera HOM05D007501 ORTHO05D009528 3.6e-31 139.0 188 46.3
vmacro09418 Vaccinium macrocarpon HOM05D007501 ORTHO05D009528 6.1e-31 138.3 217 42.4
PSO675G1715 Papaver somniferum HOM05D007501 ORTHO05D009528 1.8e-30 136.7 190 43.2
QL08p025249 Quercus lobata HOM05D007501 ORTHO05D009528 1.8e-30 136.7 193 43.0
FAN21G3657 Fragaria x ananassa HOM05D007501 ORTHO05D009528 5.2e-30 135.2 192 42.2
Haze_08443 Corylus avellana HOM05D007501 ORTHO05D009528 8.8e-30 134.4 185 43.8
FAN25G1377 Fragaria x ananassa HOM05D007501 ORTHO05D009528 1.1e-29 134.0 192 41.7
Sopen10g003430 Solanum pennellii HOM05D007501 ORTHO05D009528 2.0e-29 133.3 182 42.9
COL.COLO4_03607 Corchorus olitorius HOM05D007501 ORTHO05D009528 2.6e-29 132.9 191 44.0
PSO541G4098 Papaver somniferum HOM05D007501 ORTHO05D009528 3.3e-29 132.5 190 42.1
Solyc10g007490.2 Solanum lycopersicum HOM05D007501 ORTHO05D009528 5.7e-29 131.7 182 42.3
Sabra11G0077300 Salix brachista HOM05D007501 ORTHO05D009528 7.4e-29 131.3 191 41.9
PGSC0003DMG400021255 Solanum tuberosum HOM05D007501 ORTHO05D009528 7.4e-29 131.3 183 42.1
Peaxi162Scf01338g00001 Petunia axillaris HOM05D007501 ORTHO05D009528 1.7e-28 130.2 166 41.6
Dinv13355 Davidia involucrata HOM05D007501 ORTHO05D009528 2.2e-28 129.8 185 44.3
Sabra11G0082200 Salix brachista HOM05D007501 ORTHO05D009528 2.8e-28 129.4 185 41.1
RhsimUnG0206300 Rhododendron simsii HOM05D007501 ORTHO05D009528 4.8e-28 128.6 164 46.3
FvH4_3g17620 Fragaria vesca HOM05D007501 ORTHO05D009528 8.2e-28 127.9 189 41.3
FAN11G3003 Fragaria x ananassa HOM05D007501 ORTHO05D009528 8.2e-28 127.9 189 41.3
Gorai.007G332200 Gossypium raimondii HOM05D007501 ORTHO05D009528 8.2e-28 127.9 191 45.0
Aqoxy4G00171 Aquilegia oxysepala HOM05D007501 ORTHO05D009528 1.1e-27 127.5 185 41.6
RcHm_v2.0_Chr5g0029351 Rosa chinensis HOM05D007501 ORTHO05D009528 1.1e-27 127.5 192 41.7
Cfa019508 Carpinus fangiana HOM05D007501 ORTHO05D009528 1.4e-27 127.1 195 41.0
Ciclev10024060m.g Citrus clementina HOM05D007501 ORTHO05D009528 1.4e-27 127.1 188 40.4
MD11G1270900 Malus domestica HOM05D007501 ORTHO05D009528 2.4e-27 126.3 188 43.1
Gohir.D11G302600 Gossypium hirsutum HOM05D007501 ORTHO05D009528 4.1e-27 125.6 191 44.5
Prupe.4G155600 Prunus persica HOM05D007501 ORTHO05D009528 5.3e-27 125.2 190 41.1
Duzib213G0875 Durio zibethinus HOM05D007501 ORTHO05D009528 7.0e-27 124.8 185 42.2
Manes.03G078700 Manihot esculenta HOM05D007501 ORTHO05D009528 9.1e-27 124.4 199 40.7
Eucgr.F01372 Eucalyptus grandis HOM05D007501 ORTHO05D009528 1.6e-26 123.6 160 42.5
Gohir.A11G289800 Gossypium hirsutum HOM05D007501 ORTHO05D009528 2.0e-26 123.2 191 44.5
SalBow8G3616 Salvia bowleyana HOM05D007501 ORTHO05D009528 4.5e-26 122.1 174 41.4
TWI39G1127 Tripterygium wilfordii HOM05D007501 ORTHO05D009528 4.5e-26 122.1 169 42.6
Potri.001G382800 Populus trichocarpa HOM05D007501 ORTHO05D009528 1.0e-25 120.9 200 42.0
Glyma.15G211700 Glycine max HOM05D007501 ORTHO05D009528 1.3e-25 120.6 206 37.4
DCAR_019618 Daucus carota HOM05D007501 ORTHO05D009528 1.7e-25 120.2 186 39.8
Nn3g20958 Nelumbo nucifera HOM05D007501 ORTHO05D009528 1.7e-25 120.2 154 43.5
PGR083G0065 Punica granatum HOM05D007501 ORTHO05D009528 1.7e-25 120.2 188 41.0
Glyma.15G210500 Glycine max HOM05D007501 ORTHO05D009528 2.2e-25 119.8 208 38.5
Phvul.011G168000 Phaseolus vulgaris HOM05D007501 ORTHO05D009528 2.2e-25 119.8 212 39.2
CiPaw.12G110200 Carya illinoinensis HOM05D007501 ORTHO05D009528 3.8e-25 119.0 190 40.0
arahy.Tifrunner.gnm1.ann1.5U50EQ Arachis hypogaea HOM05D007501 ORTHO05D009528 8.5e-25 117.9 194 37.6
MD03G1250700 Malus domestica HOM05D007501 ORTHO05D009528 8.5e-25 117.9 168 42.3
VMungo1127G2061 Vigna mungo HOM05D007501 ORTHO05D009528 9.4e-24 114.4 215 38.6
Lj3g0021891 Lotus japonicus HOM05D007501 ORTHO05D009528 3.6e-23 112.5 208 37.5
arahy.Tifrunner.gnm1.ann1.652QPS Arachis hypogaea HOM05D007501 ORTHO05D009528 3.3e-21 105.9 172 40.1
unitig_62.g23076 Utricularia gibba HOM05D006003 ORTHO05D007388 3.3e-21 105.9 160 39.4
AL3G27070 Arabidopsis lyrata HOM05D007501 ORTHO05D009528 7.5e-21 104.8 189 37.6
BolC1t04925H Brassica oleracea HOM05D007501 ORTHO05D009528 7.5e-21 104.8 192 38.5
AT3G14760 Arabidopsis thaliana HOM05D007501 ORTHO05D009528 9.7e-21 104.4 189 38.6
A01p39060 Brassica napus HOM05D007501 ORTHO05D009528 1.3e-20 104.0 189 39.2
C01p49690 Brassica napus HOM05D007501 ORTHO05D009528 1.3e-20 104.0 189 38.1
BraA01t03953Z Brassica rapa HOM05D007501 ORTHO05D009528 1.3e-20 104.0 192 38.5
Thhalv10021658m.g Eutrema salsugineum HOM05D007501 ORTHO05D009528 1.3e-20 104.0 190 38.4
Thecc.07G134800 Theobroma cacao HOM05D007501 ORTHO05D009528 2.2e-20 103.2 190 36.8
Carub.0003s1443 Capsella rubella HOM05D007501 ORTHO05D009528 3.7e-20 102.4 186 38.2
Dinv26703 Davidia involucrata HOM05D007501 ORTHO05D009528 4.8e-20 102.1 139 41.0
THA.LOC104822580 Tarenaya hassleriana HOM05D007501 ORTHO05D009528 6.3e-20 101.7 187 36.9
CANSAT56G4361 Cannabis sativa HOM05D007501 ORTHO05D009528 1.1e-19 100.9 204 37.3
CsaV3_4G032800 Cucumis sativus L. HOM05D007501 ORTHO05D009528 1.1e-19 100.9 185 37.8
Aa31LG8G1980 Aethionema arabicum HOM05D007501 ORTHO05D009528 1.4e-19 100.5 186 39.2
Sp3g12990 Schrenkiella parvula HOM05D007501 ORTHO05D009528 1.8e-19 100.1 188 36.2
CARHR089710 Cardamine hirsuta HOM05D007501 ORTHO05D009528 3.1e-19 99.4 187 37.4
Nitab4.5_0000383g0020 Nicotiana tabacum HOM05D007501 ORTHO05D009528 5.3e-19 98.6 142 38.7
Peaxi162Scf00111g00124 Petunia axillaris HOM05D007501 ORTHO05D009528 7.0e-19 98.2 154 37.7
TPR.G16483 Trifolium pratense HOM05D007501 ORTHO05D009528 7.0e-19 98.2 218 33.9
Psat4g135600 Pisum sativum HOM05D007501 ORTHO05D009528 4.5e-18 95.5 218 33.9
Sopen07g030380 Solanum pennellii HOM05D007501 ORTHO05D009528 5.9e-18 95.1 156 37.8
CAN.G375.54 Capsicum annuum HOM05D007501 ORTHO05D009528 1.0e-17 94.4 157 41.4
Nitab4.5_0008460g0030 Nicotiana tabacum HOM05D007501 ORTHO05D009528 1.3e-17 94.0 156 39.7
Nitab4.5_0001140g0140 Nicotiana tabacum HOM05D007501 ORTHO05D009528 2.2e-17 93.2 156 40.4
AUR62013946 Chenopodium quinoa HOM05D007501 ORTHO05D009528 1.1e-16 90.9 164 39.0
PGSC0003DMG400043590 Solanum tuberosum HOM05D007501 ORTHO05D009528 1.1e-16 90.9 160 36.2
Cpa.g.sc682.2 Carica papaya HOM05D007501 ORTHO05D009528 9.4e-16 87.8 159 35.2
ClCG11G017140 Citrullus lanatus HOM05D007501 ORTHO05D009528 9.4e-16 87.8 160 36.2
MELO3C027342.2 Cucumis melo HOM05D007501 ORTHO05D009528 1.2e-15 87.4 160 36.9
Medtr8g042500 Medicago truncatula HOM05D007501 ORTHO05D009528 4.7e-15 85.5 221 31.7
BcaC09g48445 Brassica carinata HOM05D007501 ORTHO05D009528 3.0e-14 82.8 177 35.0
AUR62019665 Chenopodium quinoa HOM05D007501 ORTHO05D009528 3.4e-13 79.3 164 34.8
ATR0681G022 Amborella trichopoda HOM05D007501 ORTHO05D009528 5.7e-13 78.6 93 50.5
Sed0021060 Sechium edule HOM05D007501 ORTHO05D009528 6.3e-12 75.1 186 34.4
Lalb_Chr03g0031351 Lupinus albus HOM05D007501 ORTHO05D009528 1.0e-09 67.8 159 33.3
EL10Ac4g08429 Beta vulgaris HOM05D007501 ORTHO05D009528 2.5e-08 63.2 89 39.3
Peaxi162Scf00069g01713 Petunia axillaris HOM05D007501 ORTHO05D009528 7.2e-08 61.6 64 50.0
Zm00001eb055040 Zea mays HOM05D007501 ORTHO05D009528 3.6e-07 59.3 68 47.1
Sed0009872 Sechium edule HOM05D007964 ORTHO05D010090 4.7e-07 58.9 43 58.1
Sed0027049 Sechium edule HOM05D007964 ORTHO05D010090 3.0e-06 56.2 43 55.8
Oeu046067.1 Olea europaea HOM05D007964 ORTHO05D010090 6.8e-06 55.1 40 57.5


User provided reference genes

Program Settings