Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24374 Striga asiatica HOM05D010621 ORTHO05D000126 4.9e-154 547.7 275 100.0
SGA_v2.0_scaffold45G17215 Striga asiatica HOM05D010621 ORTHO05D000126 7.2e-20 102.1 251 35.1
SGA_v2.0_scaffold321G48584 Striga asiatica HOM05D010621 ORTHO05D000126 1.2e-19 101.3 169 40.8
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 1.1e-17 94.7 104 44.2
SGA_v2.0_scaffold283G46955 Striga asiatica HOM05D010621 ORTHO05D000126 4.1e-15 86.3 114 48.2
SGA_v2.0_scaffold79G25635 Striga asiatica HOM05D010621 ORTHO05D000126 1.2e-14 84.7 138 39.9
SGA_v2.0_scaffold15G07343 Striga asiatica HOM05D000003 ORTHO05D000126 2.6e-14 83.6 64 51.6
SGA_v2.0_scaffold56G20035 Striga asiatica HOM05D010621 ORTHO05D000126 1.0e-13 81.6 119 40.3
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 1.7e-13 80.9 63 52.4
SGA_v2.0_scaffold129G34162 Striga asiatica HOM05D010621 ORTHO05D000126 2.2e-13 80.5 271 29.9
SGA_v2.0_scaffold19G08685 Striga asiatica HOM05D017992 ORTHO05D000126 8.5e-13 78.6 89 40.4
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 1.9e-12 77.4 97 42.3
SGA_v2.0_scaffold234G43650 Striga asiatica HOM05D037634 ORTHO05D000126 1.9e-12 77.4 101 40.6
SGA_v2.0_scaffold332G48961 Striga asiatica HOM05D010621 ORTHO05D000126 7.2e-12 75.5 121 34.7
PGSC0003DMG400020793 Solanum tuberosum HOM05D000003 ORTHO05D000126 9.4e-12 75.1 62 46.8
Nitab4.5_0003490g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.2e-11 74.7 67 49.3
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 1.2e-11 74.7 60 48.3
Nitab4.5_0007471g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000126 4.7e-11 72.8 62 48.4
Nitab4.5_0003032g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.8e-10 70.9 104 39.4
Nitab4.5_0004512g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.8e-10 70.9 92 42.4
Dinv24168 Davidia involucrata HOM05D000723 ORTHO05D001760 4.0e-10 69.7 100 37.0
Dinv25744 Davidia involucrata HOM05D000003 ORTHO05D000126 6.7e-10 68.9 65 40.0
Nitab4.5_0001238g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.1e-09 68.2 60 46.7
Rhsim06G0043400 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.1e-09 68.2 54 42.6
SGA_v2.0_scaffold54G19489 Striga asiatica HOM05D010621 ORTHO05D000126 1.1e-09 68.2 135 36.3
Rhsim05G0174100 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.6e-09 67.0 52 48.1
Rhsim07G0115800 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.3e-09 66.6 52 48.1
SGA_v2.0_scaffold10G05166 Striga asiatica HOM05D016874 ORTHO05D000126 3.3e-09 66.6 52 48.1
TWI31G0369 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 1.3e-08 64.7 122 35.2
Lj8C13T6 Lonicera japonica HOM05D000003 ORTHO05D000126 1.7e-08 64.3 61 45.9
Rhsim09G0106200 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.7e-08 64.3 59 44.1
Rhsim01G0112200 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.8e-08 63.5 59 47.5
Rhsim06G0055700 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.8e-08 63.5 56 42.9
SGA_v2.0_scaffold72G24063 Striga asiatica HOM05D000047 ORTHO05D000044 3.7e-08 63.2 50 52.0
RhsimUnG0010100 Rhododendron simsii HOM05D000003 ORTHO05D000126 6.3e-08 62.4 63 39.7
Hma1.2p1_0145F.1_g065260 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 8.2e-08 62.0 65 43.1
CSS0013263 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.1e-07 61.6 59 42.4
Dinv10706 Davidia involucrata HOM05D000003 ORTHO05D000126 1.1e-07 61.6 62 45.2
QL03p061166 Quercus lobata HOM05D000003 ORTHO05D000126 1.1e-07 61.6 60 46.7
Rhsim02G0038900 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.1e-07 61.6 58 48.3
Eucgr.F00181 Eucalyptus grandis HOM05D000003 ORTHO05D000126 1.4e-07 61.2 61 42.6
QL03p060676 Quercus lobata HOM05D000003 ORTHO05D000126 1.4e-07 61.2 54 46.3
Nitab4.5_0013082g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.8e-07 60.8 92 38.0
SGA_v2.0_scaffold9G04785 Striga asiatica HOM05D017409 ORTHO05D000126 1.8e-07 60.8 60 43.3
SGA_v2.0_scaffold232G43493 Striga asiatica HOM05D010621 ORTHO05D000126 2.4e-07 60.5 79 38.0
Nitab4.5_0011919g0010 Nicotiana tabacum HOM05D007931 ORTHO05D000126 3.1e-07 60.1 123 33.3
Dinv15867 Davidia involucrata HOM05D000003 ORTHO05D000126 4.1e-07 59.7 62 41.9
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 4.1e-07 59.7 86 33.7
CSS0003648 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 5.3e-07 59.3 49 46.9
Nn5g27256 Nelumbo nucifera HOM05D000003 ORTHO05D000126 5.3e-07 59.3 58 44.8
QL01p020507 Quercus lobata HOM05D000003 ORTHO05D000126 5.3e-07 59.3 61 41.0
CSS0020689 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 7.0e-07 58.9 49 44.9
Dinv32998 Davidia involucrata HOM05D000003 ORTHO05D000126 7.0e-07 58.9 47 48.9
Dinv16534 Davidia involucrata HOM05D000003 ORTHO05D000126 9.1e-07 58.5 51 43.1
QL03p026642 Quercus lobata HOM05D000003 ORTHO05D000126 9.1e-07 58.5 62 40.3
QL08p039671 Quercus lobata HOM05D000003 ORTHO05D000126 9.1e-07 58.5 51 45.1
SGA_v2.0_scaffold7G03810 Striga asiatica HOM05D010621 ORTHO05D000126 9.1e-07 58.5 108 31.5
QL04p035160 Quercus lobata HOM05D000003 ORTHO05D000126 1.2e-06 58.2 60 43.3
QL04p035245 Quercus lobata HOM05D000003 ORTHO05D000126 1.2e-06 58.2 59 47.5
Dinv44808 Davidia involucrata HOM05D000003 ORTHO05D000126 1.6e-06 57.8 170 28.8
Rhsim03G0095500 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.6e-06 57.8 73 39.7
QL05p063585 Quercus lobata HOM05D000003 ORTHO05D000126 2.0e-06 57.4 53 45.3
QL08p005297 Quercus lobata HOM05D000003 ORTHO05D000006 2.0e-06 57.4 53 45.3
AUR62022274 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.7e-06 57.0 48 45.8
Dinv03310 Davidia involucrata HOM05D000003 ORTHO05D000126 2.7e-06 57.0 49 42.9
Dinv11369 Davidia involucrata HOM05D000003 ORTHO05D000126 2.7e-06 57.0 60 40.0
QL05p062331 Quercus lobata HOM05D000003 ORTHO05D000126 2.7e-06 57.0 55 45.5
QL93p1863_0020 Quercus lobata HOM05D000003 ORTHO05D000126 2.7e-06 57.0 52 48.1
Eucgr.G01744 Eucalyptus grandis HOM05D000003 ORTHO05D000126 3.5e-06 56.6 59 42.4
QL02p079362 Quercus lobata HOM05D000003 ORTHO05D000126 3.5e-06 56.6 52 46.2
QL06p009410 Quercus lobata HOM05D000003 ORTHO05D000126 3.5e-06 56.6 55 45.5
QL06p022045 Quercus lobata HOM05D000003 ORTHO05D000126 3.5e-06 56.6 71 40.8
QL09p040605 Quercus lobata HOM05D000003 ORTHO05D000126 3.5e-06 56.6 47 46.8
Rhsim04G0139700 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.5e-06 56.6 66 40.9
AUR62019956 Chenopodium quinoa HOM05D000003 ORTHO05D000126 4.5e-06 56.2 48 45.8
AUR62030344 Chenopodium quinoa HOM05D000003 ORTHO05D000126 4.5e-06 56.2 48 45.8
Hma1.2p1_0167F.1_g073680 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 4.5e-06 56.2 123 28.5
QL01p041898 Quercus lobata HOM05D000003 ORTHO05D000126 4.5e-06 56.2 48 41.7
QL04p035086 Quercus lobata HOM05D000003 ORTHO05D000126 4.5e-06 56.2 59 44.1
QL04p068010 Quercus lobata HOM05D000003 ORTHO05D000126 4.5e-06 56.2 48 45.8
QL11p021674 Quercus lobata HOM05D000003 ORTHO05D000126 4.5e-06 56.2 56 50.0
COL.COLO4_08125 Corchorus olitorius HOM05D000003 ORTHO05D000126 5.9e-06 55.8 50 48.0
Dinv06473 Davidia involucrata HOM05D000003 ORTHO05D000126 5.9e-06 55.8 51 41.2
Dinv10075 Davidia involucrata HOM05D000003 ORTHO05D000126 5.9e-06 55.8 50 42.0
Eucgr.G01608 Eucalyptus grandis HOM05D000003 ORTHO05D000126 5.9e-06 55.8 61 45.9
QL02p048438 Quercus lobata HOM05D000003 ORTHO05D000126 5.9e-06 55.8 66 36.4
QL02p095319 Quercus lobata HOM05D000003 ORTHO05D000126 5.9e-06 55.8 62 40.3
QL07p022353 Quercus lobata HOM05D000003 ORTHO05D037433 5.9e-06 55.8 48 45.8
QL07p031105 Quercus lobata HOM05D000003 ORTHO05D000006 5.9e-06 55.8 48 45.8
SGA_v2.0_scaffold302G47838 Striga asiatica HOM05D044967 ORTHO05D000126 5.9e-06 55.8 153 29.4
TAR536G0007 Trochodendron aralioides HOM05D000003 ORTHO05D000126 5.9e-06 55.8 52 42.3
AUR62006279 Chenopodium quinoa HOM05D000003 ORTHO05D000126 7.7e-06 55.5 48 43.8
Lj4C35T6 Lonicera japonica HOM05D000003 ORTHO05D000126 7.7e-06 55.5 76 38.2
Lj6P432T2 Lonicera japonica HOM05D000003 ORTHO05D000126 7.7e-06 55.5 54 44.4
TPR.G36487 Trifolium pratense HOM05D000003 ORTHO05D000126 7.7e-06 55.5 90 40.0


User provided reference genes

Program Settings