Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24348 Striga asiatica HOM05D004052 ORTHO05D004694 7.8e-161 570.9 391 100.0
CAN.G1003.5 Capsicum annuum HOM05D004052 ORTHO05D004694 6.1e-49 199.1 390 53.3
MSTRG.6718 Avicennia marina HOM05D004052 ORTHO05D004694 1.4e-48 198.0 391 50.6
PGSC0003DMG400027647 Solanum tuberosum HOM05D004052 ORTHO05D004694 8.9e-48 195.3 383 53.5
Nitab4.5_0001662g0050 Nicotiana tabacum HOM05D004052 ORTHO05D004694 5.7e-47 192.6 401 48.1
Phvul.005G060700 Phaseolus vulgaris HOM05D004052 ORTHO05D004694 2.2e-46 190.7 389 44.5
Glyma.13G259200 Glycine max HOM05D004052 ORTHO05D004694 3.7e-46 189.9 386 46.9
ECA234G3832 Erigeron canadensis HOM05D004052 ORTHO05D004694 4.1e-45 186.4 383 39.7
Peaxi162Scf00111g00086 Petunia axillaris HOM05D004052 ORTHO05D004694 5.4e-45 186.0 396 49.5
Lsat_1_v5_gn_5_125041 Lactuca sativa HOM05D004052 ORTHO05D004694 2.7e-44 183.7 383 49.1
Dinv13312 Davidia involucrata HOM05D004052 ORTHO05D004694 7.8e-44 182.2 378 51.3
Actinidia35175 Actinidia chinensis HOM05D004052 ORTHO05D004694 1.0e-43 181.8 385 52.2
Migut.M00589 Erythranthe guttata HOM05D004052 ORTHO05D004694 1.0e-43 181.8 405 49.6
Ciclev10020573m.g Citrus clementina HOM05D004052 ORTHO05D004694 1.3e-43 181.4 393 46.8
GSVIVG01038086001 Vitis vinifera HOM05D004052 ORTHO05D004694 1.7e-43 181.0 378 39.7
Medtr2g070730 Medicago truncatula HOM05D004052 ORTHO05D004694 6.6e-43 179.1 389 46.5
Duzib213G0683 Durio zibethinus HOM05D004052 ORTHO05D004694 8.6e-43 178.7 390 52.3
CANSAT94G0014 Cannabis sativa HOM05D004052 ORTHO05D004694 1.5e-42 177.9 392 42.9
Sopen07g029990 Solanum pennellii HOM05D004052 ORTHO05D004694 1.9e-42 177.6 386 52.3
vmacro09432 Vaccinium macrocarpon HOM05D004052 ORTHO05D004694 3.3e-42 176.8 385 51.4
Ca_03392_v3 Cicer arietinum L. HOM05D004052 ORTHO05D004694 5.6e-42 176.0 390 39.5
Ca_29679_v3 Cicer arietinum L. HOM05D004052 ORTHO05D004694 5.6e-42 176.0 390 39.5
Prupe.4G148800 Prunus persica HOM05D004052 ORTHO05D004694 5.6e-42 176.0 397 38.5
Solyc07g056650.4 Solanum lycopersicum HOM05D004052 ORTHO05D004694 5.6e-42 176.0 384 52.6
MD05G1208600 Malus domestica HOM05D004052 ORTHO05D004694 7.3e-42 175.6 390 37.9
QL04p070259 Quercus lobata HOM05D004052 ORTHO05D004694 7.3e-42 175.6 394 39.3
RhsimUnG0204400 Rhododendron simsii HOM05D004052 ORTHO05D004694 7.3e-42 175.6 379 51.7
CSS0033427 Camellia sinensis var. sinensis HOM05D004052 ORTHO05D004694 1.2e-41 174.9 393 50.1
COL.COLO4_17418 Corchorus olitorius HOM05D004052 ORTHO05D004694 1.2e-41 174.9 383 52.5
FAN16G0069 Fragaria x ananassa HOM05D004052 ORTHO05D004694 2.8e-41 173.7 394 37.8
HanXRQChr12g0373561 Helianthus annuus HOM05D004052 ORTHO05D004694 4.7e-41 172.9 381 38.6
Hma1.2p1_1456F.1_g284600 Hydrangea macrophylla HOM05D004052 ORTHO05D004694 8.0e-41 172.2 380 50.5
Actinidia04591 Actinidia chinensis HOM05D004052 ORTHO05D004694 1.0e-40 171.8 380 49.5
Oeu001302.1 Olea europaea HOM05D004052 ORTHO05D004694 1.0e-40 171.8 412 41.0
Lj3g0022433 Lotus japonicus HOM05D004052 ORTHO05D004694 1.4e-40 171.4 391 45.3
Manes.15G101600 Manihot esculenta HOM05D004052 ORTHO05D004694 1.8e-40 171.0 394 38.8
Cc05_g10320 Coffea canephora HOM05D004052 ORTHO05D004694 3.1e-40 170.2 393 51.7
FvH4_3g16600 Fragaria vesca HOM05D004052 ORTHO05D004694 5.2e-40 169.5 392 37.8
FAN11G2946 Fragaria x ananassa HOM05D004052 ORTHO05D004694 5.2e-40 169.5 392 37.8
Lalb_Chr25g0285401 Lupinus albus HOM05D004052 ORTHO05D004694 6.8e-40 169.1 386 49.5
FAN21G2550 Fragaria x ananassa HOM05D004052 ORTHO05D004694 1.5e-39 167.9 394 36.8
PGR031G1077 Punica granatum HOM05D004052 ORTHO05D004694 1.5e-39 167.9 393 51.7
arahy.Tifrunner.gnm1.ann1.15VG0N Arachis hypogaea HOM05D004052 ORTHO05D004694 3.4e-39 166.8 390 48.5
HanXRQChr10g0305751 Helianthus annuus HOM05D004052 ORTHO05D004694 3.4e-39 166.8 393 41.0
Gohir.A01G041900 Gossypium hirsutum HOM05D004052 ORTHO05D004694 4.4e-39 166.4 394 49.0
MSTRG.12848 Avicennia marina HOM05D004052 ORTHO05D004694 5.8e-39 166.0 393 38.2
arahy.Tifrunner.gnm1.ann1.SLVF1G Arachis hypogaea HOM05D004052 ORTHO05D004694 9.8e-39 165.2 390 49.7
Gohir.D01G029700 Gossypium hirsutum HOM05D004052 ORTHO05D004694 2.2e-38 164.1 397 44.6
Gorai.002G038800 Gossypium raimondii HOM05D004052 ORTHO05D004694 2.2e-38 164.1 397 43.8
Nitab4.5_0000639g0180 Nicotiana tabacum HOM05D004052 ORTHO05D004694 2.2e-38 164.1 385 48.6
VMungo1080G1119 Vigna mungo HOM05D004052 ORTHO05D004694 2.2e-38 164.1 392 48.7
Rhsim06G0184900 Rhododendron simsii HOM05D004052 ORTHO05D004694 2.9e-38 163.7 390 48.2
Psat1g001080 Pisum sativum HOM05D004052 ORTHO05D004694 6.4e-38 162.5 387 49.9
Glyma.15G248900 Glycine max HOM05D004052 ORTHO05D004694 8.3e-38 162.2 389 41.6
Nitab4.5_0002495g0040 Nicotiana tabacum HOM05D004052 ORTHO05D004694 1.4e-37 161.4 397 50.4
Thecc.07G146300 Theobroma cacao HOM05D004052 ORTHO05D004694 1.4e-37 161.4 397 50.4
Atru.chr2.1894 Acer truncatum HOM05D004052 ORTHO05D004694 2.4e-37 160.6 397 39.0
TPR.G22987 Trifolium pratense HOM05D004052 ORTHO05D004694 4.1e-37 159.8 387 51.2
TAR629G3304 Trochodendron aralioides HOM05D004052 ORTHO05D004694 4.1e-37 159.8 385 39.2
Actinidia12841 Actinidia chinensis HOM05D004052 ORTHO05D004694 7.0e-37 159.1 385 48.6
Lj1A816T35 Lonicera japonica HOM05D004052 ORTHO05D004694 1.2e-36 158.3 396 49.7
Sabra16G0248900 Salix brachista HOM05D004052 ORTHO05D004694 2.0e-36 157.5 391 35.8
Eucgr.F03205 Eucalyptus grandis HOM05D004052 ORTHO05D004694 3.5e-36 156.8 391 49.4
RcHm_v2.0_Chr5g0027741 Rosa chinensis HOM05D004052 ORTHO05D004694 3.5e-36 156.8 390 35.9
CiPaw.12G045700 Carya illinoinensis HOM05D004052 ORTHO05D004694 6.0e-36 156.0 393 48.6
Duzib268G0054 Durio zibethinus HOM05D004052 ORTHO05D004694 1.0e-35 155.2 394 50.5
Dinv26667 Davidia involucrata HOM05D004052 ORTHO05D004694 1.7e-35 154.5 352 47.4
AUR62037969 Chenopodium quinoa HOM05D004052 ORTHO05D004694 3.9e-35 153.3 394 45.4
Eucgr.L01921 Eucalyptus grandis HOM05D004052 ORTHO05D004694 5.0e-35 152.9 373 37.8
MD10G1195100 Malus domestica HOM05D004052 ORTHO05D004694 2.5e-34 150.6 388 37.6
EL10Ac4g08490 Beta vulgaris HOM05D004052 ORTHO05D004694 7.3e-34 149.1 389 36.8
Potri.001G377900 Populus trichocarpa HOM05D004052 ORTHO05D004694 9.5e-34 148.7 390 39.7
DCAR_019621 Daucus carota HOM05D004052 ORTHO05D004694 1.2e-33 148.3 373 41.8
Eucgr.L01015 Eucalyptus grandis HOM05D004052 ORTHO05D004694 1.6e-33 147.9 359 37.3
TPR.G26614 Trifolium pratense HOM05D004052 ORTHO05D004694 1.1e-32 145.2 385 49.4
Aqoxy7G03971 Aquilegia oxysepala HOM05D004052 ORTHO05D004694 1.4e-32 144.8 406 34.7
Eucgr.E02731 Eucalyptus grandis HOM05D004052 ORTHO05D004694 1.8e-32 144.4 382 34.8
vmacro12015 Vaccinium macrocarpon HOM05D004052 ORTHO05D004694 1.8e-32 144.4 380 42.1
Ah.06g187480 Amaranthus hybridus HOM05D004052 ORTHO05D004694 4.0e-32 143.3 387 35.9
Nitab4.5_0000505g0150 Nicotiana tabacum HOM05D004052 ORTHO05D004694 4.0e-32 143.3 381 49.6
Cfa019455 Carpinus fangiana HOM05D004052 ORTHO05D004694 6.8e-32 142.5 432 45.1
Migut.H02078 Erythranthe guttata HOM05D004052 ORTHO05D004694 8.9e-32 142.1 380 38.4
Hund02320 Selenicereus undatus HOM05D004052 ORTHO05D004694 1.5e-31 141.4 386 47.7
Haze_08491 Corylus avellana HOM05D004052 ORTHO05D004694 2.0e-31 141.0 435 42.3
Gohir.A07G155810 Gossypium hirsutum HOM05D004052 ORTHO05D004694 2.6e-31 140.6 384 40.9
Cpa.g.sc77.96 Carica papaya HOM05D004052 ORTHO05D004694 4.4e-31 139.8 379 36.7
Gorai.009G359700 Gossypium raimondii HOM05D004052 ORTHO05D004694 9.8e-31 138.7 384 35.7
Sc03g0007700 Simmondsia chinensis HOM05D004052 ORTHO05D004694 9.8e-31 138.7 387 48.1
Manes.03G091016 Manihot esculenta HOM05D004052 ORTHO05D004694 2.9e-30 137.1 394 38.6
Gohir.A04G046520 Gossypium hirsutum HOM05D004052 ORTHO05D004694 3.7e-30 136.7 385 36.6
CARHR017680 Cardamine hirsuta HOM05D004052 ORTHO05D004694 3.2e-29 133.7 382 42.7
PSO541G0468 Papaver somniferum HOM05D004052 ORTHO05D004694 3.2e-29 133.7 390 33.8
Aa31LG7G1980 Aethionema arabicum HOM05D004052 ORTHO05D004694 4.1e-29 133.3 376 40.2
Ah.04g163830 Amaranthus hybridus HOM05D004052 ORTHO05D004694 7.1e-29 132.5 379 33.2
Sp1g15260 Schrenkiella parvula HOM05D004052 ORTHO05D004694 9.2e-29 132.1 383 41.3
TAR627G0253 Trochodendron aralioides HOM05D004052 ORTHO05D004694 2.7e-28 130.6 310 36.1
Nn3g20784 Nelumbo nucifera HOM05D004052 ORTHO05D004694 3.5e-28 130.2 390 33.3
Nn4g26569 Nelumbo nucifera HOM05D004052 ORTHO05D004694 4.6e-28 129.8 401 33.4
PGSC0003DMG400007841 Solanum tuberosum HOM05D004052 ORTHO05D004694 6.0e-28 129.4 379 44.3
SGA_v2.0_scaffold4G02131 Striga asiatica HOM05D004052 ORTHO05D004694 6.0e-28 129.4 340 44.1
AL1G29350 Arabidopsis lyrata HOM05D004052 ORTHO05D004694 1.3e-27 128.3 383 41.8
PSO675G8138 Papaver somniferum HOM05D004052 ORTHO05D004694 1.3e-27 128.3 387 33.6
unitig_747.g21598 Utricularia gibba HOM05D004052 ORTHO05D004694 1.3e-27 128.3 374 41.7
Oeu006133.1 Olea europaea HOM05D004052 ORTHO05D004694 1.7e-27 127.9 379 34.6
Eucgr.E02738 Eucalyptus grandis HOM05D004052 ORTHO05D004694 2.3e-27 127.5 337 35.0
C05p15490 Brassica napus HOM05D004052 ORTHO05D004694 3.0e-27 127.1 377 44.0
THA.LOC104812292 Tarenaya hassleriana HOM05D004052 ORTHO05D004694 5.1e-27 126.3 381 47.8
unitig_46.g18300 Utricularia gibba HOM05D004052 ORTHO05D004694 1.1e-26 125.2 384 34.1
Ca_01645_v3 Cicer arietinum L. HOM05D004052 ORTHO05D004694 1.5e-26 124.8 383 35.2
BolC5t30258H Brassica oleracea HOM05D004052 ORTHO05D004694 1.9e-26 124.4 376 42.8
MBI10_g30421_MAGBIO Magnolia biondii HOM05D004052 ORTHO05D004694 4.3e-26 123.2 398 33.4
BcaC05g25666 Brassica carinata HOM05D004052 ORTHO05D004694 5.6e-26 122.9 379 40.1
A06p13030 Brassica napus HOM05D004052 ORTHO05D004694 7.3e-26 122.5 374 32.9
BraA09t41428Z Brassica rapa HOM05D004052 ORTHO05D004694 7.3e-26 122.5 385 41.3
Oeu020015.2 Olea europaea HOM05D004052 ORTHO05D004694 7.3e-26 122.5 381 42.3
Sopen12g006690 Solanum pennellii HOM05D004052 ORTHO05D004694 1.2e-25 121.7 379 48.3
BraA06t24462Z Brassica rapa HOM05D004052 ORTHO05D004694 1.6e-25 121.3 373 40.2
BcaC07g41402 Brassica carinata HOM05D004052 ORTHO05D004694 4.7e-25 119.8 385 40.5
BolC8t51952H Brassica oleracea HOM05D004052 ORTHO05D004694 4.7e-25 119.8 382 40.6
A09p60580 Brassica napus HOM05D004052 ORTHO05D004694 1.1e-24 118.6 385 40.3
BcaC07g41439 Brassica carinata HOM05D004052 ORTHO05D004694 1.8e-24 117.9 382 40.3
Thhalv10019440m.g Eutrema salsugineum HOM05D004052 ORTHO05D004694 3.1e-24 117.1 383 47.3
C08p44040 Brassica napus HOM05D004052 ORTHO05D004694 1.5e-23 114.8 385 40.5
Peaxi162Scf00000g00572 Petunia axillaris HOM05D004052 ORTHO05D004694 1.5e-23 114.8 335 49.0
AT1G17140 Arabidopsis thaliana HOM05D004052 ORTHO05D004694 3.4e-23 113.6 383 44.1
Solyc12g011360.2 Solanum lycopersicum HOM05D004052 ORTHO05D004694 4.4e-23 113.2 379 45.4
SGA_v2.0_scaffold130G34232 Striga asiatica HOM05D004052 ORTHO05D004694 4.4e-23 113.2 382 42.9
AT1G78430 Arabidopsis thaliana HOM05D004052 ORTHO05D004694 2.9e-22 110.5 379 35.6
CARHR071950 Cardamine hirsuta HOM05D004052 ORTHO05D004694 1.3e-19 101.7 376 44.4
AL2G38800 Arabidopsis lyrata HOM05D004052 ORTHO05D004694 1.7e-19 101.3 380 37.1
Thhalv10008080m.g Eutrema salsugineum HOM05D004052 ORTHO05D004694 3.9e-19 100.1 384 45.1
Carub.0001s1687 Capsella rubella HOM05D004052 ORTHO05D004694 6.2e-17 92.8 381 42.5
THA.LOC104808079 Tarenaya hassleriana HOM05D004052 ORTHO05D004694 6.2e-17 92.8 385 42.1
BcaB03g13016 Brassica carinata HOM05D004052 ORTHO05D004694 4.0e-16 90.1 376 41.5
Carub.0002s2533 Capsella rubella HOM05D004052 ORTHO05D004694 8.9e-16 89.0 382 43.7
Aa31LG4G2530 Aethionema arabicum HOM05D004052 ORTHO05D004694 2.6e-15 87.4 375 29.9
A07p27520 Brassica napus HOM05D004052 ORTHO05D004694 3.4e-15 87.0 383 31.6
BraA07t30394Z Brassica rapa HOM05D004052 ORTHO05D004694 5.8e-15 86.3 383 31.6
Lj8P142T42 Lonicera japonica HOM05D004052 ORTHO05D004694 7.6e-15 85.9 203 51.2
BolC6t38209H Brassica oleracea HOM05D004052 ORTHO05D004694 1.3e-14 85.1 384 32.0
C06p30460 Brassica napus HOM05D004052 ORTHO05D004694 4.2e-13 80.1 386 33.7
CDE10G0568 Ceratophyllum demersum HOM05D004052 ORTHO05D004694 7.8e-12 75.9 321 45.8
BcaB02g07171 Brassica carinata HOM05D004052 ORTHO05D004694 1.7e-11 74.7 383 35.8
Medtr8g008740 Medicago truncatula HOM05D000280 ORTHO05D000632 1.7e-11 74.7 96 52.1
BcaB07g34049 Brassica carinata HOM05D004052 ORTHO05D004694 3.0e-11 73.9 376 42.0
BcaC07g38832 Brassica carinata HOM05D004052 ORTHO05D004694 1.5e-10 71.6 379 38.8
BolC8t49398H Brassica oleracea HOM05D004052 ORTHO05D004694 1.5e-10 71.6 379 38.8
CDE02G2317 Ceratophyllum demersum HOM05D004052 ORTHO05D004694 1.5e-10 71.6 391 31.7
FAN25G3263 Fragaria x ananassa HOM05D004052 ORTHO05D004694 1.5e-10 71.6 106 46.2
CDE10G0657 Ceratophyllum demersum HOM05D004052 ORTHO05D004694 1.9e-10 71.2 309 30.1
C08p17720 Brassica napus HOM05D004052 ORTHO05D004694 3.3e-10 70.5 376 38.6
A08p31110 Brassica napus HOM05D004052 ORTHO05D004694 3.6e-09 67.0 199 34.2
BraA08t35037Z Brassica rapa HOM05D004052 ORTHO05D004694 1.4e-08 65.1 161 36.6
Zm00001eb152670 Zea mays HOM05D004052 ORTHO05D004694 5.3e-08 63.2 383 32.9
Zm00001eb370640 Zea mays HOM05D004052 ORTHO05D004694 9.0e-08 62.4 349 39.8
HPP92_001038 Vanilla planifolia HOM05D000666 ORTHO05D001727 6.4e-06 56.2 102 45.1
Migut.N02628 Erythranthe guttata HOM05D000666 ORTHO05D001727 8.4e-06 55.8 96 41.7


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