Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24343 Striga asiatica HOM05D003899 ORTHO05D003655 1.5e-74 283.5 240 100.0
Dinv24330 Davidia involucrata HOM05D003899 ORTHO05D003655 3.3e-21 106.3 117 49.6
Actinidia06640 Actinidia chinensis HOM05D003899 ORTHO05D003655 4.3e-21 105.9 95 51.6
Atru.chr4.839 Acer truncatum HOM05D003899 ORTHO05D003655 2.8e-20 103.2 121 49.6
CAN.G375.87 Capsicum annuum HOM05D003899 ORTHO05D003655 4.8e-20 102.4 95 53.7
PSO017G4320 Papaver somniferum HOM05D003899 ORTHO05D003655 1.8e-19 100.5 109 56.0
Manes.12G153900 Manihot esculenta HOM05D003899 ORTHO05D003655 2.4e-19 100.1 125 44.0
Thecc.01G128000 Theobroma cacao HOM05D003899 ORTHO05D003655 6.9e-19 98.6 118 47.5
Haze_17704 Corylus avellana HOM05D003899 ORTHO05D003655 1.2e-18 97.8 113 46.9
Gohir.A11G224804 Gossypium hirsutum HOM05D003899 ORTHO05D003655 2.0e-18 97.1 98 50.0
Ciclev10003780m.g Citrus clementina HOM05D003899 ORTHO05D003655 3.4e-18 96.3 117 46.2
PSO170G2020 Papaver somniferum HOM05D003899 ORTHO05D003655 1.3e-17 94.4 112 56.2
Potri.005G060700 Populus trichocarpa HOM05D003899 ORTHO05D003655 1.7e-17 94.0 101 56.4
Gohir.A02G066500 Gossypium hirsutum HOM05D003899 ORTHO05D003655 2.2e-17 93.6 102 48.0
MD05G1014900 Malus domestica HOM05D003899 ORTHO05D003655 2.2e-17 93.6 101 47.5
Gorai.005G081600 Gossypium raimondii HOM05D003899 ORTHO05D003655 1.1e-16 91.3 97 52.6
Potri.007G108100 Populus trichocarpa HOM05D003899 ORTHO05D003655 1.1e-16 91.3 97 56.7
Prupe.8G018800 Prunus persica HOM05D003899 ORTHO05D003655 1.9e-16 90.5 107 44.9
Aqoxy5G02188 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 4.2e-16 89.4 98 48.0
CiPaw.16G017800 Carya illinoinensis HOM05D003899 ORTHO05D003655 5.5e-16 89.0 101 49.5
PGSC0003DMG400027629 Solanum tuberosum HOM05D003899 ORTHO05D003655 5.5e-16 89.0 93 54.8
EL10Ac7g17632 Beta vulgaris HOM05D003899 ORTHO05D003655 7.2e-16 88.6 100 49.0
FvH4_2g14670 Fragaria vesca HOM05D003899 ORTHO05D003655 7.2e-16 88.6 105 43.8
FAN24G0119 Fragaria x ananassa HOM05D003899 ORTHO05D003655 7.2e-16 88.6 105 43.8
Duzib264G1053 Durio zibethinus HOM05D003899 ORTHO05D003655 9.4e-16 88.2 94 48.9
FAN15G3500 Fragaria x ananassa HOM05D003899 ORTHO05D003655 9.4e-16 88.2 101 44.6
Cfa018365 Carpinus fangiana HOM05D003899 ORTHO05D003655 1.6e-15 87.4 97 47.4
EL10Ac6g15278 Beta vulgaris HOM05D003899 ORTHO05D003655 2.7e-15 86.7 100 49.0
FAN20G0153 Fragaria x ananassa HOM05D003899 ORTHO05D003655 4.7e-15 85.9 101 44.6
arahy.Tifrunner.gnm1.ann1.UE47UQ Arachis hypogaea HOM05D003899 ORTHO05D003655 1.0e-14 84.7 104 43.3
CANSAT25G0207 Cannabis sativa HOM05D003899 ORTHO05D003655 1.4e-14 84.3 112 42.9
MBI06_g43012_MAGBIO Magnolia biondii HOM05D003899 ORTHO05D003655 1.8e-14 84.0 99 51.5
QL06p029227 Quercus lobata HOM05D003899 ORTHO05D003655 1.8e-14 84.0 76 50.0
MSTRG.1375 Avicennia marina HOM05D003899 ORTHO05D003655 2.3e-14 83.6 103 44.7
Nn5g28623 Nelumbo nucifera HOM05D003899 ORTHO05D003655 2.3e-14 83.6 103 48.5
Gohir.D11G228940 Gossypium hirsutum HOM05D003899 ORTHO05D003655 3.9e-14 82.8 88 48.9
Gorai.003G068900 Gossypium raimondii HOM05D003899 ORTHO05D003655 3.9e-14 82.8 88 48.9
TWI32G0122 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 5.1e-14 82.4 96 45.8
QL02p025320 Quercus lobata HOM05D003899 ORTHO05D003655 1.5e-13 80.9 85 48.2
RcHm_v2.0_Chr6g0277141 Rosa chinensis HOM05D003899 ORTHO05D003655 1.5e-13 80.9 90 45.6
DCAR_007049 Daucus carota HOM05D003899 ORTHO05D003655 5.7e-13 79.0 79 49.4
Medtr1g029140 Medicago truncatula HOM05D003899 ORTHO05D003655 5.7e-13 79.0 85 50.6
AUR62017911 Chenopodium quinoa HOM05D003899 ORTHO05D003655 7.4e-13 78.6 96 43.8
Rhsim10G0136200 Rhododendron simsii HOM05D003899 ORTHO05D003655 9.7e-13 78.2 85 48.2
RhsimUnG0132700 Rhododendron simsii HOM05D003899 ORTHO05D003655 9.7e-13 78.2 85 48.2
Dinv03732 Davidia involucrata HOM05D000043 ORTHO05D002577 1.3e-12 77.8 75 54.7
Thecc.08G144600 Theobroma cacao HOM05D003899 ORTHO05D003655 1.7e-12 77.4 80 51.2
AUR62003600 Chenopodium quinoa HOM05D003899 ORTHO05D003655 3.7e-12 76.3 94 43.6
Glyma.14G121800 Glycine max HOM05D003899 ORTHO05D003655 3.7e-12 76.3 105 44.8
Migut.M00600 Erythranthe guttata HOM05D003899 ORTHO05D003655 6.3e-12 75.5 56 69.6
Thhalv10012251m.g Eutrema salsugineum HOM05D003899 ORTHO05D003655 8.2e-12 75.1 114 42.1
COL.COLO4_14024 Corchorus olitorius HOM05D003899 ORTHO05D003655 1.1e-11 74.7 71 50.7
Gohir.D02G072400 Gossypium hirsutum HOM05D003899 ORTHO05D003655 1.8e-11 73.9 98 50.0
BcaB03g16849 Brassica carinata HOM05D003899 ORTHO05D003655 2.4e-11 73.6 96 45.8
Lj1g0026176 Lotus japonicus HOM05D003899 ORTHO05D003655 2.4e-11 73.6 111 38.7
ClCG08G006450 Citrullus lanatus HOM05D000058 ORTHO05D000077 5.3e-11 72.4 107 37.4
Duzib041G0166 Durio zibethinus HOM05D003899 ORTHO05D003655 9.1e-11 71.6 121 38.0
Aqoxy3G00817 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 1.2e-10 71.2 100 46.0
Thhalv10012331m.g Eutrema salsugineum HOM05D003899 ORTHO05D003655 1.2e-10 71.2 103 39.8
PSO126G0001 Papaver somniferum HOM05D003899 ORTHO05D003655 1.2e-10 71.2 73 57.5
Cpa.g.sc42.130 Carica papaya HOM05D003899 ORTHO05D003655 1.5e-10 70.9 51 64.7
Lalb_Chr25g0281721 Lupinus albus HOM05D003899 ORTHO05D003655 1.5e-10 70.9 96 43.8
Psat6g039960 Pisum sativum HOM05D003899 ORTHO05D003655 3.4e-10 69.7 84 44.0
PGR044G0858 Punica granatum HOM05D003899 ORTHO05D003655 3.4e-10 69.7 74 47.3
CARHR035480 Cardamine hirsuta HOM05D003899 ORTHO05D003655 4.5e-10 69.3 88 37.5
Nn1g06203 Nelumbo nucifera HOM05D003899 ORTHO05D003655 5.9e-10 68.9 89 49.4
COL.COLO4_11973 Corchorus olitorius HOM05D009119 ORTHO05D003655 7.7e-10 68.6 105 46.7
Sed0026893 Sechium edule HOM05D003899 ORTHO05D003655 7.7e-10 68.6 85 41.2
AT1G43790 Arabidopsis thaliana HOM05D003899 ORTHO05D003655 1.0e-09 68.2 104 33.7
AUR62043709 Chenopodium quinoa HOM05D003899 ORTHO05D003655 1.0e-09 68.2 85 42.4
HanXRQChr04g0125201 Helianthus annuus HOM05D003899 ORTHO05D003655 1.0e-09 68.2 105 38.1
THA.LOC104806849 Tarenaya hassleriana HOM05D003899 ORTHO05D003655 1.0e-09 68.2 88 39.8
BolC6t35162H Brassica oleracea HOM05D003899 ORTHO05D003655 1.3e-09 67.8 88 37.5
AT5G48920 Arabidopsis thaliana HOM05D003899 ORTHO05D003655 1.7e-09 67.4 111 41.4
Hma1.2p1_0528F.1_g173010 Hydrangea macrophylla HOM05D003899 ORTHO05D003655 1.7e-09 67.4 70 51.4
Lsat_1_v5_gn_9_107661 Lactuca sativa HOM05D003899 ORTHO05D003655 1.7e-09 67.4 78 47.4
AL1G51910 Arabidopsis lyrata HOM05D003899 ORTHO05D003655 2.2e-09 67.0 88 36.4
MELO3C027328.2 Cucumis melo HOM05D003899 ORTHO05D003655 2.2e-09 67.0 82 41.5
CsaV3_6G030980 Cucumis sativus L. HOM05D003899 ORTHO05D003655 2.2e-09 67.0 74 44.6
A10p07750 Brassica napus HOM05D003899 ORTHO05D003655 2.9e-09 66.6 84 38.1
BraSC36t46027Z Brassica rapa HOM05D003899 ORTHO05D003655 2.9e-09 66.6 84 38.1
TWI79G1413 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 3.8e-09 66.2 50 66.0
MD10G1014900 Malus domestica HOM05D003899 ORTHO05D003655 5.0e-09 65.9 94 43.6
BcaB07g33974 Brassica carinata HOM05D003899 ORTHO05D003655 6.5e-09 65.5 88 36.4
ECA246G5022 Erigeron canadensis HOM05D003899 ORTHO05D003655 8.5e-09 65.1 76 43.4
PGR044G1758 Punica granatum HOM05D003899 ORTHO05D003655 8.5e-09 65.1 73 52.1
Sp1g41920 Schrenkiella parvula HOM05D003899 ORTHO05D003655 1.4e-08 64.3 90 45.6
Nn1g06205 Nelumbo nucifera HOM05D003899 ORTHO05D003655 1.9e-08 63.9 50 58.0
Migut.N03236 Erythranthe guttata HOM05D003899 ORTHO05D003655 3.2e-08 63.2 89 40.4
Lsat_1_v5_gn_5_108760 Lactuca sativa HOM05D003899 ORTHO05D003655 4.2e-08 62.8 88 44.3
Lsat_1_v5_gn_5_108780 Lactuca sativa HOM05D003899 ORTHO05D003655 4.2e-08 62.8 89 43.8
Nn5g28622 Nelumbo nucifera HOM05D003899 ORTHO05D003655 7.2e-08 62.0 45 60.0
CANSAT11G1227 Cannabis sativa HOM05D003899 ORTHO05D003655 9.4e-08 61.6 63 50.8
CARHR046070 Cardamine hirsuta HOM05D003899 ORTHO05D003655 9.4e-08 61.6 98 40.8
ECA246G3613 Erigeron canadensis HOM05D003899 ORTHO05D003655 9.4e-08 61.6 91 45.1
HanXRQChr08g0232541 Helianthus annuus HOM05D003899 ORTHO05D003655 9.4e-08 61.6 77 44.2
C06p00330 Brassica napus HOM05D003899 ORTHO05D003655 1.2e-07 61.2 87 33.3
TAR381G0487 Trochodendron aralioides HOM05D003899 ORTHO05D003655 1.2e-07 61.2 50 56.0
Duzib093G1486 Durio zibethinus HOM05D009119 ORTHO05D003655 1.6e-07 60.8 88 52.3
DCAR_001362 Daucus carota HOM05D003899 ORTHO05D003655 2.1e-07 60.5 55 43.6
Ca_12820_v3 Cicer arietinum L. HOM05D003899 ORTHO05D003655 3.6e-07 59.7 112 36.6
AL1G64600 Arabidopsis lyrata HOM05D003899 ORTHO05D003655 4.7e-07 59.3 98 39.8
Carub.0001s4477 Capsella rubella HOM05D003899 ORTHO05D003655 4.7e-07 59.3 96 39.6
Cfa013717 Carpinus fangiana HOM05D009119 ORTHO05D003655 4.7e-07 59.3 94 37.2
MELO3C023688.2 Cucumis melo HOM05D003899 ORTHO05D003655 6.1e-07 58.9 85 40.0
Nitab4.5_0001140g0230 Nicotiana tabacum HOM05D003899 ORTHO05D003655 6.1e-07 58.9 49 55.1
QL02p025328 Quercus lobata HOM05D003899 ORTHO05D003655 6.1e-07 58.9 57 47.4
COL.COLO4_08943 Corchorus olitorius HOM05D003899 ORTHO05D003655 8.0e-07 58.5 71 39.4
Nitab4.5_0008388g0020 Nicotiana tabacum HOM05D003899 ORTHO05D003655 8.0e-07 58.5 49 55.1
Psat6g033720 Pisum sativum HOM05D003899 ORTHO05D003655 1.0e-06 58.2 81 40.7
Thecc.08G065300 Theobroma cacao HOM05D009119 ORTHO05D003655 1.0e-06 58.2 75 44.0
Medtr1g008620 Medicago truncatula HOM05D003899 ORTHO05D003655 1.4e-06 57.8 81 42.0
Haze_22364 Corylus avellana HOM05D009119 ORTHO05D003655 1.8e-06 57.4 86 37.2
ClCG09G009790 Citrullus lanatus HOM05D003899 ORTHO05D003655 3.0e-06 56.6 103 44.7
Glyma.14G122000 Glycine max HOM05D003899 ORTHO05D003655 3.0e-06 56.6 49 55.1
Sopen07g030130 Solanum pennellii HOM05D003899 ORTHO05D003655 3.0e-06 56.6 47 53.2
Carub.0001s3477 Capsella rubella HOM05D003899 ORTHO05D003655 5.2e-06 55.8 108 31.5
HanXRQChr05g0161081 Helianthus annuus HOM05D003899 ORTHO05D003655 6.7e-06 55.5 89 39.3
Sp1g32910 Schrenkiella parvula HOM05D003899 ORTHO05D003655 6.7e-06 55.5 74 36.5
Lj2C604T4 Lonicera japonica HOM05D003899 ORTHO05D003655 8.8e-06 55.1 74 43.2
Lalb_Chr23g0271351 Lupinus albus HOM05D003899 ORTHO05D003655 8.8e-06 55.1 100 44.0


User provided reference genes

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