Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24317 Striga asiatica HOM05D007566 ORTHO05D009505 5.9e-51 204.1 120 100.0
Migut.M01859 Erythranthe guttata HOM05D007566 ORTHO05D009505 2.7e-19 99.0 120 55.8
Oeu030434.1 Olea europaea HOM05D007566 ORTHO05D009505 1.6e-16 89.7 120 52.5
MSTRG.15205 Avicennia marina HOM05D007566 ORTHO05D009505 2.7e-16 89.0 120 51.7
Duzib213G0757 Durio zibethinus HOM05D007566 ORTHO05D009505 6.8e-15 84.3 120 52.5
HanXRQChr05g0151621 Helianthus annuus HOM05D007566 ORTHO05D009505 4.8e-13 78.2 123 48.0
PGR083G0896 Punica granatum HOM05D007566 ORTHO05D009505 8.3e-13 77.4 120 49.2
Thecc.07G071100 Theobroma cacao HOM05D007566 ORTHO05D009505 8.3e-13 77.4 120 50.0
CiPaw.11G176600 Carya illinoinensis HOM05D007566 ORTHO05D009505 2.4e-12 75.9 120 45.8
COL.COLO4_09480 Corchorus olitorius HOM05D007566 ORTHO05D009505 4.1e-12 75.1 120 47.5
unitig_0.g2051 Utricularia gibba HOM05D007566 ORTHO05D009505 5.4e-12 74.7 120 50.0
Dinv08341 Davidia involucrata HOM05D007566 ORTHO05D009505 7.0e-12 74.3 117 48.7
MD11G1237100 Malus domestica HOM05D007566 ORTHO05D009505 1.2e-11 73.6 120 50.8
Rhsim06G0192900 Rhododendron simsii HOM05D007566 ORTHO05D009505 1.6e-11 73.2 122 49.2
CANSAT11G1965 Cannabis sativa HOM05D007566 ORTHO05D009505 2.0e-11 72.8 120 49.2
Potri.001G406900 Populus trichocarpa HOM05D007566 ORTHO05D009505 2.0e-11 72.8 120 47.5
Lsat_1_v5_gn_5_6820 Lactuca sativa HOM05D007566 ORTHO05D009505 1.0e-10 70.5 120 48.3
GSVIVG01014436001 Vitis vinifera HOM05D007566 ORTHO05D009505 1.0e-10 70.5 123 45.5
FvH4_3g21000 Fragaria vesca HOM05D007566 ORTHO05D009505 1.7e-10 69.7 120 50.0
FAN11G3987 Fragaria x ananassa HOM05D007566 ORTHO05D009505 1.7e-10 69.7 120 50.0
Cc05_g12690 Coffea canephora HOM05D007566 ORTHO05D009505 2.3e-10 69.3 120 45.0
Prupe.4G190300 Prunus persica HOM05D007566 ORTHO05D009505 2.9e-10 68.9 120 50.0
ECA246G4377 Erigeron canadensis HOM05D007566 ORTHO05D009505 3.8e-10 68.6 120 46.7
Solyc07g063575.1 Solanum lycopersicum HOM05D007566 ORTHO05D009505 3.8e-10 68.6 120 45.8
Sopen07g031760 Solanum pennellii HOM05D007566 ORTHO05D009505 3.8e-10 68.6 120 45.8
Medtr2g080990 Medicago truncatula HOM05D007566 ORTHO05D009505 5.0e-10 68.2 122 45.1
Aa31LG5G10140 Aethionema arabicum HOM05D007566 ORTHO05D009505 8.6e-10 67.4 122 47.5
Psat5g246560 Pisum sativum HOM05D007566 ORTHO05D009505 1.1e-09 67.0 122 47.5
TAR627G0519 Trochodendron aralioides HOM05D007566 ORTHO05D009505 1.1e-09 67.0 120 45.8
Ciclev10010014m.g Citrus clementina HOM05D007566 ORTHO05D009505 1.5e-09 66.6 121 45.5
FAN25G3649 Fragaria x ananassa HOM05D007566 ORTHO05D009505 1.9e-09 66.2 120 48.3
Sabra16G0268300 Salix brachista HOM05D007566 ORTHO05D009505 2.5e-09 65.9 120 45.8
Sabra16G0270600 Salix brachista HOM05D007566 ORTHO05D009505 2.5e-09 65.9 120 45.8
THA.LOC104811846 Tarenaya hassleriana HOM05D007566 ORTHO05D009505 2.5e-09 65.9 120 44.2
TPR.G32847 Trifolium pratense HOM05D007566 ORTHO05D009505 2.5e-09 65.9 122 48.4
BcaNung07200 Brassica carinata HOM05D007566 ORTHO05D009505 3.3e-09 65.5 121 43.8
C01p23510 Brassica napus HOM05D007566 ORTHO05D009505 3.3e-09 65.5 121 43.8
BolC1t02296H Brassica oleracea HOM05D007566 ORTHO05D009505 3.3e-09 65.5 121 43.8
Glyma.12G219500 Glycine max HOM05D007566 ORTHO05D009505 4.2e-09 65.1 121 45.5
Hund23375 Selenicereus undatus HOM05D007566 ORTHO05D009505 4.2e-09 65.1 123 45.5
A01p18560 Brassica napus HOM05D007566 ORTHO05D009505 5.5e-09 64.7 121 43.8
Eucgr.F01078 Eucalyptus grandis HOM05D007566 ORTHO05D009505 5.5e-09 64.7 120 44.2
TWI39G1107 Tripterygium wilfordii HOM05D007566 ORTHO05D009505 5.5e-09 64.7 120 45.0
Ah.04g165410 Amaranthus hybridus HOM05D007566 ORTHO05D009505 7.2e-09 64.3 120 46.7
Gohir.D01G055900 Gossypium hirsutum HOM05D007566 ORTHO05D009505 7.2e-09 64.3 120 45.8
Nitab4.5_0000297g0110 Nicotiana tabacum HOM05D007566 ORTHO05D009505 7.2e-09 64.3 120 45.8
Gohir.A01G068600 Gossypium hirsutum HOM05D007566 ORTHO05D009505 9.5e-09 63.9 120 45.8
PSO675G4296 Papaver somniferum HOM05D007566 ORTHO05D009505 9.5e-09 63.9 121 46.3
TAR371G0602 Trochodendron aralioides HOM05D007566 ORTHO05D009505 9.5e-09 63.9 120 43.3
BraA01t01804Z Brassica rapa HOM05D007566 ORTHO05D009505 1.2e-08 63.5 121 43.8
PSO541G1909 Papaver somniferum HOM05D007566 ORTHO05D009505 1.2e-08 63.5 121 45.5
Phvul.005G086000 Phaseolus vulgaris HOM05D007566 ORTHO05D009505 1.2e-08 63.5 122 46.7
PGSC0003DMG401019249 Solanum tuberosum HOM05D007566 ORTHO05D009505 1.2e-08 63.5 120 44.2
RcHm_v2.0_Chr5g0035981 Rosa chinensis HOM05D007566 ORTHO05D009505 1.6e-08 63.2 120 47.5
Hma1.2p1_3251F.1_g334500 Hydrangea macrophylla HOM05D007566 ORTHO05D009505 2.1e-08 62.8 121 42.1
Sp7g25310 Schrenkiella parvula HOM05D007566 ORTHO05D009505 2.1e-08 62.8 121 45.5
Atru.chr2.2863 Acer truncatum HOM05D007566 ORTHO05D009505 2.8e-08 62.4 120 43.3
EL10Ac4g08058 Beta vulgaris HOM05D007566 ORTHO05D009505 2.8e-08 62.4 120 45.0
Manes.15G083200 Manihot esculenta HOM05D007566 ORTHO05D009505 2.8e-08 62.4 120 45.0
Actinidia39409 Actinidia chinensis HOM05D007566 ORTHO05D009505 3.6e-08 62.0 121 44.6
Gorai.002G076000 Gossypium raimondii HOM05D007566 ORTHO05D009505 3.6e-08 62.0 120 45.0
Zm00001eb106900 Zea mays HOM05D007566 ORTHO05D009505 3.6e-08 62.0 123 43.1
Glyma.13G281800 Glycine max HOM05D007566 ORTHO05D009505 4.7e-08 61.6 121 42.1
Lalb_Chr25g0286741 Lupinus albus HOM05D007566 ORTHO05D009505 4.7e-08 61.6 121 44.6
arahy.Tifrunner.gnm1.ann1.YDUQ9T Arachis hypogaea HOM05D007566 ORTHO05D009505 6.1e-08 61.2 122 45.1
Aqoxy1G02746 Aquilegia oxysepala HOM05D007566 ORTHO05D009505 1.0e-07 60.5 120 44.2
MELO3C016554.2 Cucumis melo HOM05D007566 ORTHO05D009505 1.0e-07 60.5 120 40.8
arahy.Tifrunner.gnm1.ann1.MQ63GR Arachis hypogaea HOM05D007566 ORTHO05D009505 1.4e-07 60.1 122 44.3
DCAR_022487 Daucus carota HOM05D007566 ORTHO05D009505 1.4e-07 60.1 71 53.5
DCAR_009984 Daucus carota HOM05D007566 ORTHO05D009505 1.8e-07 59.7 120 41.7
Cpa.g.sc389.3 Carica papaya HOM05D007566 ORTHO05D009505 2.3e-07 59.3 120 43.3
Os07g0562900 Oryza sativa ssp. japonica HOM05D007566 ORTHO05D009505 3.0e-07 58.9 120 45.0
CDE05G3101 Ceratophyllum demersum HOM05D007566 ORTHO05D009505 4.0e-07 58.5 120 42.5
VMungo0647G1906 Vigna mungo HOM05D007566 ORTHO05D009505 4.0e-07 58.5 56 62.5
CsaV3_3G005960 Cucumis sativus L. HOM05D007566 ORTHO05D009505 1.5e-06 56.6 120 39.2
AUR62015600 Chenopodium quinoa HOM05D007566 ORTHO05D009505 2.6e-06 55.8 120 44.2
Lj3g0013461 Lotus japonicus HOM05D007566 ORTHO05D009505 2.6e-06 55.8 120 45.8
TWI38G1712 Tripterygium wilfordii HOM05D007566 ORTHO05D009505 9.8e-06 53.9 112 39.3


User provided reference genes

Program Settings