Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 1.3e-137 493.0 252 100.0
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 5.0e-76 288.5 254 62.6
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 2.4e-70 269.6 262 61.1
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 3.5e-61 239.2 266 54.5
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 1.0e-60 237.7 262 51.5
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 2.9e-60 236.1 258 54.7
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 2.9e-60 236.1 258 56.2
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 5.0e-60 235.3 229 58.1
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.4e-59 233.8 230 53.5
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 1.9e-59 233.4 263 54.0
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 2.5e-59 233.0 218 61.0
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 2.5e-59 233.0 258 55.8
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 3.2e-59 232.6 219 57.1
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 3.6e-58 229.2 259 52.9
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 3.6e-58 229.2 261 54.0
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 6.1e-58 228.4 261 51.7
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 3.0e-57 226.1 202 61.4
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 1.5e-56 223.8 258 52.7
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 3.3e-56 222.6 258 51.9
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 4.8e-55 218.8 270 50.7
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 1.4e-54 217.2 171 64.3
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 1.8e-54 216.9 238 55.5
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 1.8e-54 216.9 192 60.9
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 2.4e-54 216.5 226 54.9
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 2.4e-54 216.5 260 51.9
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 3.1e-54 216.1 266 50.8
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 3.1e-54 216.1 269 50.2
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 4.1e-54 215.7 236 56.4
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 4.1e-54 215.7 230 53.9
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 7.0e-54 214.9 227 53.7
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 1.2e-53 214.2 258 50.8
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 1.2e-53 214.2 215 57.7
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 2.0e-53 213.4 258 52.3
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 3.5e-53 212.6 258 48.8
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 4.5e-53 212.2 272 50.0
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 4.5e-53 212.2 289 47.8
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 7.7e-53 211.5 192 59.4
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 1.0e-52 211.1 226 54.4
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 1.0e-52 211.1 148 68.2
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 1.3e-52 210.7 265 50.2
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 1.7e-52 210.3 259 51.7
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 2.2e-52 209.9 289 47.1
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 3.8e-52 209.1 259 50.2
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 5.0e-52 208.8 228 54.4
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 8.5e-52 208.0 265 50.6
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 1.1e-51 207.6 233 52.4
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 1.5e-51 207.2 210 58.1
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 4.2e-51 205.7 227 49.3
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 5.5e-51 205.3 268 45.5
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 7.2e-51 204.9 174 61.5
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 7.2e-51 204.9 174 61.5
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 7.2e-51 204.9 259 49.8
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 9.4e-51 204.5 259 51.0
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 9.4e-51 204.5 189 58.2
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 9.4e-51 204.5 197 59.9
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 1.2e-50 204.1 192 58.3
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 2.1e-50 203.4 178 61.2
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 3.6e-50 202.6 228 53.9
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 4.7e-50 202.2 195 56.4
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 6.1e-50 201.8 174 60.9
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 6.1e-50 201.8 174 60.9
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 6.1e-50 201.8 234 55.1
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 1.4e-49 200.7 255 51.8
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 2.3e-49 199.9 174 60.3
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 2.3e-49 199.9 251 47.0
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 3.0e-49 199.5 127 75.6
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 4.0e-49 199.1 245 51.0
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 4.0e-49 199.1 221 51.6
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 5.2e-49 198.7 198 58.1
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.2e-48 197.6 242 50.8
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 2.6e-48 196.4 247 48.6
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 7.5e-48 194.9 179 61.5
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 9.7e-48 194.5 231 52.8
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 1.3e-47 194.1 194 57.2
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 1.1e-46 191.0 175 56.6
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 1.8e-46 190.3 177 54.2
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 7.0e-46 188.3 161 63.4
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 1.2e-45 187.6 187 53.5
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 3.5e-45 186.0 146 60.3
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 4.5e-45 185.7 238 49.2
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 1.0e-44 184.5 162 63.0
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 6.5e-44 181.8 200 54.0
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 8.5e-44 181.4 240 49.6
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 4.0e-41 172.6 296 38.2
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 5.2e-41 172.2 175 52.0
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 3.4e-40 169.5 348 35.3
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 5.7e-40 168.7 191 49.7
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 1.3e-39 167.5 234 45.3
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 8.3e-39 164.9 264 42.8
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 3.1e-38 162.9 177 51.4
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 2.0e-37 160.2 242 47.1
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 5.5e-35 152.1 180 55.0
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 8.0e-34 148.3 128 58.6
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 3.0e-33 146.4 188 48.4
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 1.7e-31 140.6 90 70.0
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 2.8e-31 139.8 192 42.7
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 1.4e-30 137.5 111 60.4
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 4.5e-29 132.5 87 64.4
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 7.8e-29 131.7 259 39.0
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 2.9e-28 129.8 214 39.3
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 1.5e-27 127.5 199 42.2
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 1.5e-27 127.5 199 42.2
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 9.5e-27 124.8 213 39.4
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 4.7e-26 122.5 134 53.0
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.0e-25 121.3 147 51.7
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 5.4e-22 109.0 152 39.5
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 2.0e-21 107.1 88 62.5
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 4.6e-21 105.9 253 38.3
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 2.3e-20 103.6 168 42.3
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 6.6e-20 102.1 172 41.3
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 6.0e-13 79.0 87 54.0
MBI18_g11113_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009042 2.0e-08 63.9 82 45.1
FAN25G1192 Fragaria x ananassa HOM05D000461 ORTHO05D009042 8.3e-07 58.5 55 58.2


User provided reference genes

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