Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24260 Striga asiatica HOM05D003240 ORTHO05D009426 4.8e-40 168.3 163 100.0
AT1G53130 Arabidopsis thaliana HOM05D003240 ORTHO05D009426 5.6e-20 101.7 72 63.9
Migut.M00801 Erythranthe guttata HOM05D003240 ORTHO05D009426 5.6e-20 101.7 113 78.8
Haze_09435 Corylus avellana HOM05D003240 ORTHO05D009426 7.3e-20 101.3 106 80.2
CARHR043350 Cardamine hirsuta HOM05D003240 ORTHO05D009426 9.5e-20 100.9 72 62.5
Thhalv10012399m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 1.2e-19 100.5 72 63.9
AL1G61490 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 1.6e-19 100.1 72 63.9
CANSAT56G1752 Cannabis sativa HOM05D003240 ORTHO05D009426 1.6e-19 100.1 67 70.1
DCAR_013111 Daucus carota HOM05D003240 ORTHO05D009426 2.1e-19 99.8 68 70.6
Carub.0001s4229 Capsella rubella HOM05D003240 ORTHO05D009426 2.8e-19 99.4 72 62.5
Sp1g39680 Schrenkiella parvula HOM05D003240 ORTHO05D009426 4.7e-19 98.6 73 61.6
BcaB07g33356 Brassica carinata HOM05D003240 ORTHO05D009426 8.0e-19 97.8 72 61.1
Eucgr.F01147 Eucalyptus grandis HOM05D003240 ORTHO05D009426 8.0e-19 97.8 67 70.1
TWI38G1889 Tripterygium wilfordii HOM05D003240 ORTHO05D009426 8.0e-19 97.8 106 79.2
Thhalv10022293m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 1.0e-18 97.4 110 62.7
Thecc.07G091300 Theobroma cacao HOM05D003240 ORTHO05D009426 1.0e-18 97.4 70 58.6
Duzib213G1023 Durio zibethinus HOM05D003240 ORTHO05D009426 1.4e-18 97.1 108 75.0
Atru.chr2.2486 Acer truncatum HOM05D003240 ORTHO05D009426 2.3e-18 96.3 68 66.2
Cpa.g.sc80.73 Carica papaya HOM05D003240 ORTHO05D009426 3.1e-18 95.9 68 66.2
Haze_09433 Corylus avellana HOM05D003240 ORTHO05D009426 4.0e-18 95.5 106 77.4
PGR083G0779 Punica granatum HOM05D003240 ORTHO05D009426 4.0e-18 95.5 67 67.2
Aa31LG10G2000 Aethionema arabicum HOM05D003240 ORTHO05D009426 5.2e-18 95.1 72 59.7
CiPaw.12G118800 Carya illinoinensis HOM05D003240 ORTHO05D009426 5.2e-18 95.1 68 66.2
Lj3g0021284 Lotus japonicus HOM05D003240 ORTHO05D009426 5.2e-18 95.1 67 68.7
Oeu019313.1 Olea europaea HOM05D003240 ORTHO05D009426 5.2e-18 95.1 68 67.6
A06p01190 Brassica napus HOM05D003240 ORTHO05D009426 6.8e-18 94.7 72 59.7
BraA06t23346Z Brassica rapa HOM05D003240 ORTHO05D009426 6.8e-18 94.7 72 59.7
Dinv14922 Davidia involucrata HOM05D003240 ORTHO05D009426 6.8e-18 94.7 67 68.7
Prupe.4G180300 Prunus persica HOM05D003240 ORTHO05D009426 6.8e-18 94.7 67 67.2
Sp3g13510 Schrenkiella parvula HOM05D003240 ORTHO05D009426 8.9e-18 94.4 110 71.8
Cc05_g11970 Coffea canephora HOM05D003240 ORTHO05D009426 1.2e-17 94.0 106 77.4
THA.LOC104818082 Tarenaya hassleriana HOM05D003240 ORTHO05D009426 1.2e-17 94.0 68 58.8
FvH4_3g19820 Fragaria vesca HOM05D003240 ORTHO05D009426 1.5e-17 93.6 68 60.3
FAN25G3490 Fragaria x ananassa HOM05D003240 ORTHO05D009426 1.5e-17 93.6 68 60.3
Nitab4.5_0001241g0070 Nicotiana tabacum HOM05D003240 ORTHO05D009426 1.5e-17 93.6 105 76.2
AL3G27700 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 2.0e-17 93.2 72 56.9
Hma1.2p1_0458F.1_g157080 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 2.0e-17 93.2 67 64.2
Hma1.2p1_0458F.1_g157090 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 2.0e-17 93.2 67 64.2
Hma1.2p1_0898F.1_g234470 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 2.0e-17 93.2 66 66.7
BcaC08g43498 Brassica carinata HOM05D003240 ORTHO05D009426 2.6e-17 92.8 72 58.3
C06p08830 Brassica napus HOM05D003240 ORTHO05D009426 2.6e-17 92.8 72 58.3
BolC6t35961H Brassica oleracea HOM05D003240 ORTHO05D017503 2.6e-17 92.8 72 58.3
Hma1.2p1_0458F.1_g157060 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 4.4e-17 92.0 67 65.7
Potri.001G399200 Populus trichocarpa HOM05D003240 ORTHO05D009426 5.8e-17 91.7 67 64.2
Carub.0003s1496 Capsella rubella HOM05D003240 ORTHO05D009426 7.5e-17 91.3 72 55.6
Nitab4.5_0001336g0090 Nicotiana tabacum HOM05D003240 ORTHO05D009426 7.5e-17 91.3 100 78.0
Potri.011G118600 Populus trichocarpa HOM05D003240 ORTHO05D009426 7.5e-17 91.3 67 65.7
FAN16G0971 Fragaria x ananassa HOM05D003240 ORTHO05D009426 9.8e-17 90.9 68 58.8
RcHm_v2.0_Chr5g0033251 Rosa chinensis HOM05D003240 ORTHO05D009426 9.8e-17 90.9 68 63.2
FAN21G1097 Fragaria x ananassa HOM05D003240 ORTHO05D009426 1.3e-16 90.5 68 58.8
Gohir.D05G352500 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.3e-16 90.5 108 71.3
Gorai.009G384600 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.3e-16 90.5 108 71.3
Nn1g06519 Nelumbo nucifera HOM05D003240 ORTHO05D009426 1.3e-16 90.5 65 64.6
Gohir.A04G032100 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.7e-16 90.1 108 71.3
Cfa020576 Carpinus fangiana HOM05D003240 ORTHO05D009426 2.9e-16 89.4 61 70.5
Glyma.12G225100 Glycine max HOM05D003240 ORTHO05D009426 2.9e-16 89.4 68 64.7
Medtr2g085370 Medicago truncatula HOM05D003240 ORTHO05D009426 2.9e-16 89.4 68 64.7
BcaB04g20937 Brassica carinata HOM05D000882 ORTHO05D009426 3.7e-16 89.0 59 62.7
MD03G1228400 Malus domestica HOM05D003240 ORTHO05D009426 3.7e-16 89.0 106 74.5
DCAR_017136 Daucus carota HOM05D003240 ORTHO05D009426 4.9e-16 88.6 68 63.2
Gohir.A04G031760 Gossypium hirsutum HOM05D003240 ORTHO05D009426 4.9e-16 88.6 70 54.3
Gohir.A04G031920 Gossypium hirsutum HOM05D003240 ORTHO05D009426 4.9e-16 88.6 70 54.3
Gohir.D05G352600 Gossypium hirsutum HOM05D003240 ORTHO05D009426 4.9e-16 88.6 70 54.3
Gohir.D05G352700 Gossypium hirsutum HOM05D003240 ORTHO05D009426 4.9e-16 88.6 70 54.3
Sabra16G0261800 Salix brachista HOM05D003240 ORTHO05D009426 6.4e-16 88.2 64 65.6
TAR627G0347 Trochodendron aralioides HOM05D003240 ORTHO05D009426 6.4e-16 88.2 66 60.6
Gorai.009G384900 Gossypium raimondii HOM05D003240 ORTHO05D009426 8.3e-16 87.8 70 54.3
Gorai.009G385000 Gossypium raimondii HOM05D003240 ORTHO05D009426 8.3e-16 87.8 70 54.3
Gorai.009G385100 Gossypium raimondii HOM05D003240 ORTHO05D009426 8.3e-16 87.8 70 54.3
VMungo1080G0324 Vigna mungo HOM05D003240 ORTHO05D009426 8.3e-16 87.8 68 63.2
Phvul.005G072700 Phaseolus vulgaris HOM05D003240 ORTHO05D009426 1.1e-15 87.4 68 63.2
CSS0038111 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 1.4e-15 87.0 67 61.2
Gorai.009G384700 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.4e-15 87.0 70 52.9
Sabra11G0103500 Salix brachista HOM05D003240 ORTHO05D009426 1.4e-15 87.0 70 55.7
CAN.G162.53 Capsicum annuum HOM05D003240 ORTHO05D009426 1.9e-15 86.7 95 77.9
Ciclev10010456m.g Citrus clementina HOM05D003240 ORTHO05D009426 1.9e-15 86.7 67 58.2
Gohir.A04G032000 Gossypium hirsutum HOM05D003240 ORTHO05D009426 2.4e-15 86.3 70 54.3
ATR0737G149 Amborella trichopoda HOM05D003240 ORTHO05D009426 4.1e-15 85.5 66 65.2
Aqoxy1G02389 Aquilegia oxysepala HOM05D003240 ORTHO05D009426 4.1e-15 85.5 58 63.8
CSS0044584 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 7.0e-15 84.7 67 62.7
Manes.15G087500 Manihot esculenta HOM05D003240 ORTHO05D009426 1.6e-14 83.6 67 58.2
MBI06_g23076_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 2.0e-14 83.2 66 60.6
MBI07_g30192_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 2.0e-14 83.2 66 60.6
BcaNung07375 Brassica carinata HOM05D003240 ORTHO05D009426 2.7e-14 82.8 64 56.2
Lj3g0010365 Lotus japonicus HOM05D003240 ORTHO05D009426 3.5e-14 82.4 71 57.7
Cfa020578 Carpinus fangiana HOM05D003240 ORTHO05D009426 2.3e-13 79.7 58 67.2
Sopen07g031280 Solanum pennellii HOM05D003240 ORTHO05D009426 2.3e-13 79.7 57 61.4
PGSC0003DMG400012465 Solanum tuberosum HOM05D003240 ORTHO05D009426 2.3e-13 79.7 98 75.5
COL.COLO4_27180 Corchorus olitorius HOM05D003240 ORTHO05D009426 3.9e-13 79.0 112 64.3
Medtr2g085360 Medicago truncatula HOM05D003240 ORTHO05D009426 6.6e-13 78.2 71 53.5
TPR.G38961 Trifolium pratense HOM05D003240 ORTHO05D009426 6.6e-13 78.2 60 63.3
Prupe.4G180400 Prunus persica HOM05D003240 ORTHO05D009426 1.1e-12 77.4 68 58.8
Lalb_Chr03g0042631 Lupinus albus HOM05D003240 ORTHO05D009426 2.5e-12 76.3 66 56.1
TPR.G39028 Trifolium pratense HOM05D003240 ORTHO05D009426 2.5e-12 76.3 67 55.2
Nn4g25258 Nelumbo nucifera HOM05D003240 ORTHO05D009426 4.3e-12 75.5 61 60.7
BcaC09g48486 Brassica carinata HOM05D003240 ORTHO05D009426 5.6e-12 75.1 58 55.2
Glyma.13G276200 Glycine max HOM05D003240 ORTHO05D009426 5.6e-12 75.1 57 61.4
Nn1g04123 Nelumbo nucifera HOM05D003240 ORTHO05D009426 1.2e-11 73.9 69 52.2
unitig_37.g12571 Utricularia gibba HOM05D003240 ORTHO05D009426 7.5e-09 64.7 69 46.4
PSO675G7736 Papaver somniferum HOM05D003240 ORTHO05D009426 8.3e-08 61.2 59 45.8
PSO541G3864 Papaver somniferum HOM05D003240 ORTHO05D009426 1.1e-07 60.8 59 45.8
Rhsim06G0199500 Rhododendron simsii HOM05D003240 ORTHO05D009426 1.9e-07 60.1 72 47.2


User provided reference genes

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