Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24236 Striga asiatica HOM05D006259 ORTHO05D007804 2.6e-228 795.0 394 100.0
MSTRG.15241 Avicennia marina HOM05D006259 ORTHO05D007804 6.0e-153 544.7 396 69.9
Migut.M00783 Erythranthe guttata HOM05D006259 ORTHO05D007804 1.8e-144 516.5 398 66.3
Nitab4.5_0002330g0080 Nicotiana tabacum HOM05D006259 ORTHO05D007804 2.6e-124 449.5 403 57.1
Nitab4.5_0005017g0010 Nicotiana tabacum HOM05D006259 ORTHO05D007804 1.9e-122 443.4 405 56.3
Solyc07g062930.3 Solanum lycopersicum HOM05D006259 ORTHO05D007804 1.5e-119 433.7 401 56.9
Sopen07g031120 Solanum pennellii HOM05D006259 ORTHO05D007804 2.8e-118 429.5 401 56.4
Cc05_g11780 Coffea canephora HOM05D006259 ORTHO05D007804 3.1e-117 426.0 405 56.8
CSS0047678 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 6.9e-117 424.9 397 58.2
CSS0047365 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 9.1e-117 424.5 397 58.2
Oeu025362.1 Olea europaea HOM05D006259 ORTHO05D007804 2.3e-112 409.8 403 55.1
Peaxi162Scf00069g01731 Petunia axillaris HOM05D006259 ORTHO05D007804 3.0e-112 409.5 395 53.2
MD11G1252500 Malus domestica HOM05D006259 ORTHO05D007804 1.7e-110 403.7 387 55.6
vmacro11886 Vaccinium macrocarpon HOM05D006259 ORTHO05D007804 1.1e-109 401.0 400 54.5
Prupe.4G176500 Prunus persica HOM05D006259 ORTHO05D007804 1.4e-109 400.6 384 55.7
GSVIVG01014295001 Vitis vinifera HOM05D006259 ORTHO05D007804 9.1e-109 397.9 387 57.4
Cfa020561 Carpinus fangiana HOM05D006259 ORTHO05D007804 5.9e-108 395.2 393 55.5
Dinv20198 Davidia involucrata HOM05D006259 ORTHO05D007804 1.0e-107 394.4 300 66.3
QL08p022713 Quercus lobata HOM05D006259 ORTHO05D007804 4.2e-106 389.0 408 53.2
RcHm_v2.0_Chr5g0032751 Rosa chinensis HOM05D006259 ORTHO05D007804 7.2e-106 388.3 383 54.3
CANSAT56G1257 Cannabis sativa HOM05D006259 ORTHO05D007804 9.4e-106 387.9 390 53.3
HanXRQChr11g0351981 Helianthus annuus HOM05D006259 ORTHO05D007804 1.2e-105 387.5 398 53.3
Sed0019446 Sechium edule HOM05D006259 ORTHO05D007804 2.7e-105 386.3 343 55.7
DCAR_017124 Daucus carota HOM05D006259 ORTHO05D007804 3.6e-105 386.0 338 57.7
Manes.15G089200 Manihot esculenta HOM05D006259 ORTHO05D007804 1.0e-104 384.4 389 54.0
Cpa.g.sc622.1 Carica papaya HOM05D006259 ORTHO05D007804 1.8e-104 383.6 387 52.2
FvH4_3g19490 Fragaria vesca HOM05D006259 ORTHO05D007804 1.8e-104 383.6 371 53.9
Lj8A154G76 Lonicera japonica HOM05D006259 ORTHO05D007804 1.8e-104 383.6 392 53.3
THA.LOC104811875 Tarenaya hassleriana HOM05D006259 ORTHO05D007804 3.0e-104 382.9 391 52.9
Haze_09453 Corylus avellana HOM05D006259 ORTHO05D007804 8.8e-104 381.3 393 52.7
TWI39G0898 Tripterygium wilfordii HOM05D006259 ORTHO05D007804 8.8e-104 381.3 332 57.5
Ciclev10008595m.g Citrus clementina HOM05D006259 ORTHO05D007804 1.5e-103 380.6 361 54.6
CAN.G162.38 Capsicum annuum HOM05D006259 ORTHO05D007804 2.0e-103 380.2 297 60.6
Gorai.009G375900 Gossypium raimondii HOM05D006259 ORTHO05D007804 5.7e-103 378.6 386 52.6
BcaB05g22091 Brassica carinata HOM05D006259 ORTHO05D007804 3.7e-102 375.9 388 53.9
unitig_46.g18320 Utricularia gibba HOM05D006259 ORTHO05D007804 4.8e-102 375.6 379 54.6
FAN11G4033 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.8e-101 373.6 371 53.1
AL8G29030 Arabidopsis lyrata HOM05D006259 ORTHO05D007804 2.4e-101 373.2 384 54.2
Potri.011G116100 Populus trichocarpa HOM05D006259 ORTHO05D007804 5.3e-101 372.1 397 51.4
Aqoxy1G02333 Aquilegia oxysepala HOM05D006259 ORTHO05D007804 9.1e-101 371.3 395 51.9
CiPaw.11G171900 Carya illinoinensis HOM05D006259 ORTHO05D007804 9.1e-101 371.3 330 56.7
CARHR267060 Cardamine hirsuta HOM05D006259 ORTHO05D007804 3.5e-100 369.4 388 52.8
Carub.0008s1423 Capsella rubella HOM05D006259 ORTHO05D007804 4.5e-100 369.0 388 51.3
Lsat_1_v5_gn_7_104661 Lactuca sativa HOM05D006259 ORTHO05D007804 4.5e-100 369.0 400 51.5
ECA236G1201 Erigeron canadensis HOM05D006259 ORTHO05D007804 5.9e-100 368.6 404 50.7
Thhalv10015851m.g Eutrema salsugineum HOM05D006259 ORTHO05D007804 1.3e-99 367.5 338 56.5
Sabra11G0101700 Salix brachista HOM05D006259 ORTHO05D007804 1.3e-99 367.5 433 47.8
Lalb_Chr19g0134121 Lupinus albus HOM05D006259 ORTHO05D007804 6.5e-99 365.2 402 50.0
Sp6g16000 Schrenkiella parvula HOM05D006259 ORTHO05D007804 1.9e-98 363.6 389 50.1
AT5G53920 Arabidopsis thaliana HOM05D006259 ORTHO05D007804 5.5e-98 362.1 384 51.3
CsaV3_4G033510 Cucumis sativus L. HOM05D006259 ORTHO05D007804 5.5e-98 362.1 324 57.1
ClCG11G017880 Citrullus lanatus HOM05D006259 ORTHO05D007804 7.2e-98 361.7 329 57.1
MELO3C025605.2 Cucumis melo HOM05D006259 ORTHO05D007804 9.4e-98 361.3 324 56.8
Thecc.07G095600 Theobroma cacao HOM05D006259 ORTHO05D007804 1.6e-97 360.5 297 60.9
A02p10700 Brassica napus HOM05D006259 ORTHO05D007804 3.6e-97 359.4 390 51.0
Glyma.06G237700 Glycine max HOM05D006259 ORTHO05D007804 1.4e-96 357.5 401 47.9
Duzib268G0576 Durio zibethinus HOM05D006259 ORTHO05D007804 1.8e-96 357.1 388 52.6
TAR629G2204 Trochodendron aralioides HOM05D006259 ORTHO05D007804 1.8e-96 357.1 297 62.0
Ciclev10010717m.g Citrus clementina HOM05D006259 ORTHO05D007804 2.3e-96 356.7 313 57.8
BcaC03g14368 Brassica carinata HOM05D006259 ORTHO05D007804 2.0e-95 353.6 390 50.0
Hund02234 Selenicereus undatus HOM05D006259 ORTHO05D007804 4.4e-95 352.4 391 48.6
EL10Ac4g08228 Beta vulgaris HOM05D006259 ORTHO05D007804 7.5e-95 351.7 396 49.5
Rhsim06G0201700 Rhododendron simsii HOM05D006259 ORTHO05D007804 2.2e-94 350.1 420 48.8
BraA02t06133Z Brassica rapa HOM05D006259 ORTHO05D007804 2.8e-94 349.7 398 50.0
Aa31LG3G10030 Aethionema arabicum HOM05D006259 ORTHO05D007804 6.3e-94 348.6 338 55.3
Sc16g0007160 Simmondsia chinensis HOM05D006259 ORTHO05D007804 1.1e-93 347.8 396 50.3
arahy.Tifrunner.gnm1.ann1.J8ZMQ9 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.8e-93 347.1 416 45.7
C02p17820 Brassica napus HOM05D006259 ORTHO05D007804 2.4e-93 346.7 403 48.9
BolC2t07911H Brassica oleracea HOM05D006259 ORTHO05D007804 3.1e-93 346.3 405 48.6
FAN25G1146 Fragaria x ananassa HOM05D006259 ORTHO05D007804 5.9e-92 342.0 314 56.1
FAN16G3026 Fragaria x ananassa HOM05D006259 ORTHO05D007804 2.9e-91 339.7 355 52.7
Ah.04g164700 Amaranthus hybridus HOM05D006259 ORTHO05D007804 5.0e-91 339.0 391 48.3
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 5.0e-91 339.0 318 53.1
Phvul.011G163100 Phaseolus vulgaris HOM05D006259 ORTHO05D007804 6.5e-91 338.6 406 44.8
Lj3g0016272 Lotus japonicus HOM05D006259 ORTHO05D007804 8.5e-91 338.2 399 47.1
arahy.Tifrunner.gnm1.ann1.KCB6L6 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.5e-90 337.4 421 45.1
Medtr8g058780 Medicago truncatula HOM05D006259 ORTHO05D007804 2.5e-90 336.7 314 53.8
Medtr8g061260 Medicago truncatula HOM05D006259 ORTHO05D007804 2.5e-90 336.7 314 53.8
ATR0150G016 Amborella trichopoda HOM05D006259 ORTHO05D007804 3.2e-90 336.3 386 47.7
Eucgr.F01160 Eucalyptus grandis HOM05D006259 ORTHO05D007804 4.2e-90 335.9 283 58.7
AUR62019461 Chenopodium quinoa HOM05D006259 ORTHO05D007804 1.2e-89 334.3 385 48.6
VMungo1127G0077 Vigna mungo HOM05D006259 ORTHO05D007804 2.1e-89 333.6 386 47.4
PSO541G2103 Papaver somniferum HOM05D006259 ORTHO05D007804 3.6e-89 332.8 374 50.0
Duzib244G0007 Durio zibethinus HOM05D006259 ORTHO05D007804 1.4e-88 330.9 387 49.1
PGR083G2616 Punica granatum HOM05D006259 ORTHO05D007804 3.0e-88 329.7 308 55.8
HPP92_017550 Vanilla planifolia HOM05D006259 ORTHO05D007804 4.4e-87 325.9 308 54.5
Os05g0497675 Oryza sativa ssp. japonica HOM05D006259 ORTHO05D007804 6.3e-86 322.0 331 50.5
CDE05G3386 Ceratophyllum demersum HOM05D006259 ORTHO05D007804 2.4e-85 320.1 295 52.2
FAN21G1610 Fragaria x ananassa HOM05D006259 ORTHO05D007804 3.1e-85 319.7 384 47.4
Psat4g178120 Pisum sativum HOM05D006259 ORTHO05D007804 5.4e-85 318.9 341 49.0
PSO675G6900 Papaver somniferum HOM05D006259 ORTHO05D007804 7.0e-85 318.5 362 49.7
Atru.chr2.2422 Acer truncatum HOM05D006259 ORTHO05D007804 2.0e-84 317.0 229 67.2
Gohir.A04G035300 Gossypium hirsutum HOM05D006259 ORTHO05D007804 1.0e-83 314.7 389 46.8
Gohir.D05G348100 Gossypium hirsutum HOM05D006259 ORTHO05D007804 1.1e-82 311.2 236 62.7
Nn1g06450 Nelumbo nucifera HOM05D006259 ORTHO05D007804 3.6e-81 306.2 355 47.9
Mapoly0161s0032 Marchantia polymorpha HOM05D006259 ORTHO05D007804 2.4e-77 293.5 331 46.5
Pp3c22_15620 Physcomitrium patens HOM05D006259 ORTHO05D007804 1.9e-74 283.9 342 44.2
arahy.Tifrunner.gnm1.ann1.IZH9YM Arachis hypogaea HOM05D006259 ORTHO05D007804 3.2e-69 266.5 220 59.1
arahy.Tifrunner.gnm1.ann1.JJTS0M Arachis hypogaea HOM05D006259 ORTHO05D007804 4.1e-69 266.2 233 56.7
AagrBONN_evm.TU.Sc2ySwM_362.1898 Anthoceros agrestis HOM05D006259 ORTHO05D007804 5.4e-69 265.8 344 42.2
Hma1.2p1_1411F.1_g281740 Hydrangea macrophylla HOM05D006259 ORTHO05D007804 3.6e-65 253.1 187 69.0
COL.COLO4_36712 Corchorus olitorius HOM05D006259 ORTHO05D007804 6.6e-51 205.7 257 47.1
Actinidia09701 Actinidia chinensis HOM05D006259 ORTHO05D007804 2.5e-50 203.8 170 60.6
AUR62036169 Chenopodium quinoa HOM05D006259 ORTHO05D007804 1.6e-49 201.1 246 45.5
SMO230G0105 Selaginella moellendorffii HOM05D006259 ORTHO05D007804 7.6e-47 192.2 188 51.6
Cre09.g396735 Chlamydomonas reinhardtii HOM05D006259 ORTHO05D007804 3.8e-46 189.9 345 37.1
Zm00001eb352610 Zea mays HOM05D006259 ORTHO05D007804 4.2e-45 186.4 221 47.1
MCO08G332 Micromonas commoda HOM05D006259 ORTHO05D007804 1.6e-44 184.5 307 36.5
PRCOL_00006646 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 6.6e-43 179.1 235 38.7
Thecc.02G165400 Theobroma cacao HOM05D006259 ORTHO05D007804 6.2e-41 172.6 185 52.4
PRCOL_00002790 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 4.9e-38 162.9 245 36.3
arahy.Tifrunner.gnm1.ann1.Y39XKR Arachis hypogaea HOM05D006259 ORTHO05D007804 4.2e-37 159.8 189 46.6
arahy.Tifrunner.gnm1.ann1.NGC2LD Arachis hypogaea HOM05D006259 ORTHO05D007804 1.0e-35 155.2 260 35.4
MBI18_g48079_MAGBIO Magnolia biondii HOM05D006259 ORTHO05D007804 4.8e-33 146.4 147 55.8
arahy.Tifrunner.gnm1.ann1.N67PK3 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.1e-32 145.2 290 32.1
COL.COLO4_00923 Corchorus olitorius HOM05D006259 ORTHO05D007804 3.1e-32 143.7 289 30.8
arahy.Tifrunner.gnm1.ann1.88153A Arachis hypogaea HOM05D006259 ORTHO05D007804 1.2e-31 141.7 263 33.1
arahy.Tifrunner.gnm1.ann1.UFBT31 Arachis hypogaea HOM05D006259 ORTHO05D007804 2.6e-31 140.6 255 34.5
arahy.Tifrunner.gnm1.ann1.LRZU8J Arachis hypogaea HOM05D006259 ORTHO05D007804 1.1e-29 135.2 139 47.5
arahy.Tifrunner.gnm1.ann1.H7I8JY Arachis hypogaea HOM05D006259 ORTHO05D007804 2.1e-28 131.0 147 45.6
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 7.9e-28 129.0 295 29.5
arahy.Tifrunner.gnm1.ann1.5V52A0 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.5e-26 124.8 136 47.1
HPP92_017577 Vanilla planifolia HOM05D006259 ORTHO05D007804 3.4e-23 113.6 158 40.5
PRCOL_00002336 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 3.9e-19 100.1 203 30.5
Duzib213G0106 Durio zibethinus HOM05D006259 ORTHO05D007804 8.2e-17 92.4 112 43.8
Actinidia09700 Actinidia chinensis HOM05D006259 ORTHO05D053169 1.5e-07 61.6 76 46.1


User provided reference genes

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