Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 1.3e-301 1038.9 489 100.0
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 2.0e-235 818.9 487 79.3
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 3.5e-227 791.6 493 76.7
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 5.1e-226 787.7 484 75.4
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 1.2e-224 783.1 484 74.8
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 4.7e-224 781.2 484 75.4
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 8.1e-224 780.4 484 75.2
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 1.4e-223 779.6 482 75.5
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 2.3e-223 778.9 484 75.2
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 1.2e-222 776.5 486 73.9
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 2.0e-222 775.8 502 73.1
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 4.4e-222 774.6 479 76.0
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 1.7e-221 772.7 493 74.0
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 4.9e-221 771.2 487 74.1
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 6.4e-221 770.8 494 72.5
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 1.4e-220 769.6 483 73.9
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 3.5e-219 765.0 504 71.8
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 3.5e-219 765.0 495 72.1
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 1.3e-218 763.1 484 72.9
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 1.1e-217 760.0 484 73.8
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 1.9e-217 759.2 488 72.5
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 5.6e-217 757.7 472 75.0
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 5.6e-217 757.7 527 68.7
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 5.6e-217 757.7 527 68.7
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 9.6e-217 756.9 511 70.5
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 1.6e-216 756.1 476 74.6
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 2.1e-216 755.7 482 73.2
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 2.8e-216 755.4 529 68.6
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 3.6e-216 755.0 485 73.4
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 3.1e-215 751.9 497 71.0
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 3.1e-215 751.9 485 72.2
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 3.1e-215 751.9 480 73.5
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 6.8e-215 750.7 476 74.4
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 6.8e-215 750.7 480 72.9
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 8.9e-215 750.4 485 71.8
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 1.2e-214 750.0 495 72.3
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 1.2e-214 750.0 481 73.2
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 1.5e-214 749.6 485 72.2
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 2.0e-214 749.2 486 72.6
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 4.4e-214 748.0 481 73.0
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 4.4e-214 748.0 485 71.8
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 2.2e-213 745.7 476 73.9
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.2e-213 745.7 482 72.8
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 2.9e-213 745.3 486 72.0
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 6.4e-213 744.2 476 74.2
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.1e-212 743.4 469 73.8
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 1.1e-212 743.4 486 72.0
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 4.2e-212 741.5 467 73.4
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 3.5e-211 738.4 486 71.6
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 4.6e-211 738.0 470 73.2
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 6.0e-211 737.6 486 71.0
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 5.1e-210 734.6 468 73.9
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 5.1e-210 734.6 480 71.0
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 6.6e-210 734.2 476 73.3
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 7.3e-209 730.7 511 68.5
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 9.6e-209 730.3 492 70.7
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 9.6e-209 730.3 484 71.7
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 1.3e-208 729.9 467 73.0
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 2.1e-208 729.2 464 73.7
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 2.8e-208 728.8 492 70.9
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 3.6e-208 728.4 467 73.0
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 1.1e-207 726.9 468 72.9
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 1.1e-207 726.9 468 72.9
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 1.1e-207 726.9 488 69.3
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 1.4e-207 726.5 488 69.9
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 2.4e-207 725.7 467 72.6
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 1.2e-206 723.4 492 70.5
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 2.6e-206 722.2 492 70.3
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 3.4e-206 721.8 510 68.2
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 7.6e-206 720.7 467 72.2
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 2.2e-205 719.2 467 71.7
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 2.9e-205 718.8 467 72.2
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 3.8e-205 718.4 466 71.2
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 5.4e-204 714.5 479 69.1
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 2.7e-203 712.2 487 69.0
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 4.6e-203 711.4 486 70.0
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 6.0e-203 711.1 473 69.6
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 7.9e-203 710.7 491 68.6
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 7.9e-203 710.7 485 68.9
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 7.9e-203 710.7 485 68.9
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 5.1e-202 708.0 476 68.3
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 1.9e-201 706.1 475 70.7
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 3.3e-201 705.3 467 69.6
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 7.3e-201 704.1 473 68.9
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 1.3e-200 703.4 471 68.2
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 4.8e-200 701.4 463 70.8
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 2.6e-198 695.7 489 66.9
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 9.6e-193 677.2 469 65.9
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 9.0e-191 670.6 483 66.5
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 1.0e-189 667.2 470 67.2
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 1.1e-185 653.7 483 65.0
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 2.5e-185 652.5 415 74.0
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 2.8e-184 649.0 415 73.5
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 5.1e-178 628.2 446 67.3
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 8.7e-178 627.5 432 67.6
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 1.2e-174 617.1 477 62.1
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 4.5e-174 615.1 477 60.8
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 3.6e-171 605.5 455 62.4
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 1.5e-169 600.1 483 61.1
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 7.4e-169 597.8 443 65.9
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 2.5e-156 556.2 470 57.2
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 1.6e-150 537.0 397 65.7
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 7.7e-150 534.6 341 72.7
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 9.4e-148 527.7 369 67.8
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 2.7e-147 526.2 343 72.9
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 2.0e-142 510.0 495 52.9
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 9.8e-137 491.1 502 51.0
MD03G1237500 Malus domestica HOM05D006017 ORTHO05D007821 8.6e-133 478.0 329 69.3
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 2.0e-126 456.8 318 67.6
CSS0003418 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.2e-80 303.9 209 70.8
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 6.2e-75 285.8 159 81.8
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 9.3e-71 271.9 178 68.5
Rhsim07G0153900 Rhododendron simsii HOM05D006017 ORTHO05D000252 1.2e-65 255.0 211 59.2
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 1.5e-65 254.6 137 84.7
Nitab4.5_0004022g0010 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.2e-62 245.0 120 89.2
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 2.1e-62 244.2 136 80.1
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 3.1e-58 230.3 168 64.9
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 1.7e-51 208.0 447 35.3
FAN25G2436 Fragaria x ananassa HOM05D006017 ORTHO05D007821 3.7e-51 206.8 132 72.7
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 3.4e-49 200.3 116 74.1
TWI38G1497 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 3.6e-46 190.3 144 64.6
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 4.4e-44 183.3 244 45.9
SEGI_25954 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 1.2e-33 148.7 95 69.5
A10p11370 Brassica napus HOM05D006017 ORTHO05D007821 3.0e-29 134.0 268 38.8
SEGI_23248 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 7.7e-25 119.4 79 65.8
TWI38G0821 Tripterygium wilfordii HOM05D006017 ORTHO05D413584 2.2e-24 117.9 60 86.7
FAN25G2983 Fragaria x ananassa HOM05D006017 ORTHO05D007821 2.9e-24 117.5 104 51.9
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 5.0e-24 116.7 200 39.0
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 2.6e-20 104.4 105 50.5
arahy.Tifrunner.gnm1.ann1.EZ2Q4B Arachis hypogaea HOM05D006004 ORTHO05D006976 9.8e-20 102.4 59 74.6
HPP92_003866 Vanilla planifolia HOM05D006017 ORTHO05D007821 1.3e-08 65.5 54 57.4


User provided reference genes

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