Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 6.0e-223 777.3 427 100.0
SGA_v2.0_scaffold34G13768 Striga asiatica HOM05D006105 ORTHO05D006345 2.3e-113 413.3 428 65.0
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 2.1e-71 273.9 419 51.1
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 4.5e-61 239.6 429 45.2
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 1.4e-43 181.4 417 37.6
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 5.1e-41 172.9 425 38.1
SalBow8G2605 Salvia bowleyana HOM05D006105 ORTHO05D006345 2.0e-40 171.0 403 38.5
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 1.5e-37 161.4 351 38.7
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 4.5e-37 159.8 433 37.2
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 5.9e-37 159.5 434 35.0
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 3.8e-36 156.8 413 38.5
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 6.5e-36 156.0 410 35.1
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 8.5e-36 155.6 425 36.0
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 3.6e-34 150.2 434 35.5
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 1.0e-33 148.7 411 36.0
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 7.4e-32 142.5 412 35.7
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 3.5e-29 133.7 422 34.4
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 1.7e-28 131.3 365 36.7
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 8.5e-28 129.0 430 35.3
Oeu061338.1 Olea europaea HOM05D006105 ORTHO05D006345 1.5e-27 128.3 231 44.6
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 1.9e-27 127.9 417 33.8
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 2.5e-27 127.5 425 33.9
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 3.2e-27 127.1 429 35.4
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 5.5e-27 126.3 398 32.7
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 5.5e-27 126.3 398 32.7
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 5.5e-27 126.3 456 34.4
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 1.2e-26 125.2 419 33.9
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 2.1e-26 124.4 400 35.0
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 3.6e-26 123.6 448 33.5
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.0e-25 122.1 445 35.1
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 4.0e-25 120.2 284 37.0
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 2.6e-24 117.5 332 36.1
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 4.4e-24 116.7 429 33.8
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 9.8e-24 115.5 449 33.0
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 1.7e-23 114.8 443 33.0
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 2.2e-23 114.4 423 34.3
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 2.8e-23 114.0 436 34.2
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 3.7e-23 113.6 448 33.7
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.4e-22 111.7 450 32.4
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 2.4e-22 110.9 449 33.2
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 4.1e-22 110.2 413 31.5
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 5.4e-22 109.8 247 36.0
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.6e-21 108.2 413 32.0
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 2.0e-21 107.8 425 32.5
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 4.5e-21 106.7 410 32.9
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 7.7e-21 105.9 400 35.2
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 2.2e-20 104.4 418 32.5
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 6.5e-20 102.8 428 32.0
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 1.1e-19 102.1 433 29.6
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 1.1e-19 102.1 430 31.9
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 3.2e-19 100.5 413 32.4
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 3.2e-19 100.5 415 32.3
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 4.2e-19 100.1 431 31.6
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 7.2e-19 99.4 459 31.8
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 9.4e-19 99.0 394 29.4
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 1.2e-18 98.6 430 32.1
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 2.7e-18 97.4 413 31.5
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 2.7e-18 97.4 399 30.1
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 2.7e-18 97.4 394 31.2
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 3.6e-18 97.1 406 33.0
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 3.6e-18 97.1 432 31.5
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 8.0e-18 95.9 450 31.1
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 1.4e-17 95.1 410 31.0
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 1.8e-17 94.7 413 31.0
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 8.8e-17 92.4 352 29.3
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 2.6e-16 90.9 284 32.7
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 3.4e-16 90.5 406 31.0
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 7.5e-16 89.4 442 29.4
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 7.5e-16 89.4 429 31.0
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 9.8e-16 89.0 427 30.7
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 9.8e-16 89.0 411 29.2
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 2.8e-15 87.4 418 31.1
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 2.8e-15 87.4 431 30.9
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 2.8e-15 87.4 454 30.2
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 3.7e-15 87.0 404 30.9
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 3.7e-15 87.0 404 30.4
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 6.3e-15 86.3 423 30.7
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 6.3e-15 86.3 368 31.0
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 8.3e-15 85.9 443 28.4
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.1e-14 85.5 419 30.5
CSS0004572 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 2.4e-14 84.3 239 38.5
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 2.4e-14 84.3 436 28.9
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 2.4e-14 84.3 432 28.0
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 5.4e-14 83.2 277 33.2
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 7.0e-14 82.8 223 37.7
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 9.1e-14 82.4 437 30.7
Lsat_1_v5_gn_5_129201 Lactuca sativa HOM05D006105 ORTHO05D006345 9.1e-14 82.4 455 32.5
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 1.2e-13 82.0 436 30.5
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 1.6e-13 81.6 439 30.3
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 1.6e-13 81.6 438 30.1
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 3.5e-13 80.5 418 30.6
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 7.7e-13 79.3 422 30.1
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 1.0e-12 79.0 447 29.3
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 1.3e-12 78.6 303 30.4
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 2.3e-12 77.8 404 30.0
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 5.0e-12 76.6 427 29.5
ClCG07G009910 Citrullus lanatus HOM05D006105 ORTHO05D006345 6.6e-12 76.3 406 31.0
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 8.6e-12 75.9 418 29.7
Sed0015488 Sechium edule HOM05D006105 ORTHO05D006345 1.5e-11 75.1 411 27.5
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 2.5e-11 74.3 427 27.9
Oeu051102.1 Olea europaea HOM05D006105 ORTHO05D006345 1.2e-10 72.0 108 49.1
ECA236G3415 Erigeron canadensis HOM05D006105 ORTHO05D006345 2.1e-10 71.2 210 33.3
MELO3C016090.2 Cucumis melo HOM05D006105 ORTHO05D006345 2.8e-10 70.9 339 30.1
Nitab4.5_0003077g0030 Nicotiana tabacum HOM05D006105 ORTHO05D006345 2.8e-10 70.9 359 28.7
arahy.Tifrunner.gnm1.ann1.TTJ9YL Arachis hypogaea HOM05D006105 ORTHO05D006345 6.1e-10 69.7 399 28.1
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 6.1e-10 69.7 443 27.8
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.0e-09 68.9 407 29.0
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 1.4e-09 68.6 243 31.3
CsaV3_4G008420 Cucumis sativus L. HOM05D006105 ORTHO05D006345 6.8e-09 66.2 334 29.6
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 1.2e-08 65.5 422 28.2
Migut.H01972 Erythranthe guttata HOM05D006105 ORTHO05D006345 1.5e-08 65.1 192 37.0
Glyma.06G232800 Glycine max HOM05D006105 ORTHO05D006345 4.4e-08 63.5 327 27.8
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 4.4e-08 63.5 455 26.4
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 7.5e-08 62.8 433 28.6
PGR083G1480 Punica granatum HOM05D006105 ORTHO05D006345 7.5e-08 62.8 416 26.9
Psat5g240600 Pisum sativum HOM05D006105 ORTHO05D006345 1.3e-07 62.0 289 29.1
Lsat_1_v5_gn_7_103061 Lactuca sativa HOM05D006105 ORTHO05D006345 6.3e-07 59.7 391 25.8
ATR0602G093 Amborella trichopoda HOM05D006105 ORTHO05D006345 9.2e-06 55.8 444 27.9


User provided reference genes

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