Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold738G53541 Striga asiatica HOM05D004280 ORTHO05D005059 2.7e-95 352.1 184 100.0
SGA_v2.0_scaffold329G48825 Striga asiatica HOM05D004280 ORTHO05D005059 1.7e-94 349.4 184 98.9
SGA_v2.0_scaffold552G52891 Striga asiatica HOM05D004280 ORTHO05D005059 2.3e-94 349.0 183 98.9
SGA_v2.0_scaffold693G53465 Striga asiatica HOM05D004280 ORTHO05D005059 6.6e-94 347.4 183 98.4
SGA_v2.0_scaffold521G52700 Striga asiatica HOM05D004280 ORTHO05D005059 8.9e-91 337.0 200 90.5
SGA_v2.0_scaffold674G53431 Striga asiatica HOM05D004280 ORTHO05D005059 8.9e-91 337.0 200 90.5
SGA_v2.0_scaffold674G53436 Striga asiatica HOM05D004280 ORTHO05D005059 7.0e-88 327.4 200 88.0
MSTRG.18872 Avicennia marina HOM05D004280 ORTHO05D005059 1.2e-71 273.5 203 77.3
SalBow6G7108 Salvia bowleyana HOM05D004280 ORTHO05D005059 4.3e-69 265.0 203 74.9
SGA_v2.0_scaffold13G06338 Striga asiatica HOM05D004280 ORTHO05D005059 1.6e-68 263.1 137 98.5
Migut.D02547 Erythranthe guttata HOM05D004280 ORTHO05D005059 2.8e-68 262.3 204 75.0
CSS0019811 Camellia sinensis var. sinensis HOM05D004280 ORTHO05D005059 9.3e-64 247.3 193 71.0
Dinv23876 Davidia involucrata HOM05D004280 ORTHO05D005059 1.2e-63 246.9 204 69.6
CSS0019544 Camellia sinensis var. sinensis HOM05D004280 ORTHO05D005059 2.3e-62 242.7 202 67.8
Nn7g35895 Nelumbo nucifera HOM05D004280 ORTHO05D005059 3.0e-62 242.3 199 69.8
SalBow4G3146 Salvia bowleyana HOM05D004280 ORTHO05D005059 5.1e-62 241.5 249 61.4
RcHm_v2.0_Chr5g0083141 Rosa chinensis HOM05D004280 ORTHO05D005059 7.3e-61 237.7 197 67.0
RcHm_v2.0_Chr4g0431981 Rosa chinensis HOM05D004280 ORTHO05D005059 1.3e-60 236.9 197 66.5
RhsimUnG0194900 Rhododendron simsii HOM05D004280 ORTHO05D005059 4.8e-60 235.0 202 67.8
Rhsim09G0027500 Rhododendron simsii HOM05D004280 ORTHO05D005059 1.4e-59 233.4 202 67.3
Cpa.g.sc119.63 Carica papaya HOM05D004280 ORTHO05D005059 5.3e-59 231.5 202 66.3
FAN21G3004 Fragaria x ananassa HOM05D004280 ORTHO05D005059 2.6e-58 229.2 195 66.7
Sc10g0001010 Simmondsia chinensis HOM05D004280 ORTHO05D005059 3.4e-58 228.8 197 67.5
ECA248G0362 Erigeron canadensis HOM05D004280 ORTHO05D005059 5.8e-58 228.0 204 66.2
VMungo0647G2277 Vigna mungo HOM05D004280 ORTHO05D005059 5.8e-58 228.0 201 67.7
Hma1.2p1_0843F.1_g227335 Hydrangea macrophylla HOM05D004280 ORTHO05D005059 7.6e-58 227.6 177 72.3
Hma1.2p1_0843F.1_g227340 Hydrangea macrophylla HOM05D004280 ORTHO05D005059 7.6e-58 227.6 177 72.3
Lj2A726G7 Lonicera japonica HOM05D004280 ORTHO05D005059 7.6e-58 227.6 205 66.3
ECA233G4188 Erigeron canadensis HOM05D004280 ORTHO05D005059 1.3e-57 226.9 202 65.8
vmacro00623 Vaccinium macrocarpon HOM05D004280 ORTHO05D005059 1.3e-57 226.9 209 64.1
Medtr3g083880 Medicago truncatula HOM05D004280 ORTHO05D005059 1.7e-57 226.5 203 66.5
FvH4_3g45340 Fragaria vesca HOM05D004280 ORTHO05D005059 4.9e-57 224.9 205 63.9
Manes.01G036600 Manihot esculenta HOM05D004280 ORTHO05D005059 8.4e-57 224.2 203 66.0
unitig_749.g13584 Utricularia gibba HOM05D004280 ORTHO05D005059 8.4e-57 224.2 162 77.2
Ah.04g157750 Amaranthus hybridus HOM05D004280 ORTHO05D005059 1.4e-56 223.4 199 66.3
CAN.G193.6 Capsicum annuum HOM05D004280 ORTHO05D005059 1.4e-56 223.4 201 63.2
GSVIVG01025433001 Vitis vinifera HOM05D004280 ORTHO05D005059 1.4e-56 223.4 139 84.2
DCAR_009024 Daucus carota HOM05D004280 ORTHO05D005059 1.9e-56 223.0 206 63.6
Prupe.6G007100 Prunus persica HOM05D004280 ORTHO05D005059 2.4e-56 222.6 203 62.1
PGR102G2828 Punica granatum HOM05D004280 ORTHO05D005059 3.2e-56 222.2 200 66.0
Solyc04g076580.4 Solanum lycopersicum HOM05D004280 ORTHO05D005059 5.4e-56 221.5 202 64.4
Lsat_1_v5_gn_1_67700 Lactuca sativa HOM05D004280 ORTHO05D005059 7.1e-56 221.1 196 66.8
Glyma.06G309800 Glycine max HOM05D004280 ORTHO05D005059 9.3e-56 220.7 203 66.0
Glyma.14G130400 Glycine max HOM05D004280 ORTHO05D005059 9.3e-56 220.7 203 66.0
Lsat_1_v5_gn_6_54260 Lactuca sativa HOM05D004280 ORTHO05D005059 9.3e-56 220.7 185 67.0
Phvul.001G056600 Phaseolus vulgaris HOM05D004280 ORTHO05D005059 9.3e-56 220.7 202 65.3
TWI60G1521 Tripterygium wilfordii HOM05D004280 ORTHO05D005059 9.3e-56 220.7 200 64.5
Haze_22956 Corylus avellana HOM05D004280 ORTHO05D005059 1.6e-55 219.9 206 63.1
Haze_22962 Corylus avellana HOM05D004280 ORTHO05D005059 1.6e-55 219.9 206 63.1
Lj6g0003060 Lotus japonicus HOM05D004280 ORTHO05D005059 2.1e-55 219.5 202 65.3
Aqoxy7G03617 Aquilegia oxysepala HOM05D004280 ORTHO05D005059 2.7e-55 219.2 139 81.3
SGA_v2.0_scaffold6G03409 Striga asiatica HOM05D004280 ORTHO05D005059 2.7e-55 219.2 151 80.8
TAR623G1159 Trochodendron aralioides HOM05D004280 ORTHO05D005059 2.7e-55 219.2 139 82.0
Ah.04g157660 Amaranthus hybridus HOM05D004280 ORTHO05D005059 3.5e-55 218.8 199 65.3
Glyma.14G154000 Glycine max HOM05D004280 ORTHO05D005059 3.5e-55 218.8 203 65.5
QL01p008475 Quercus lobata HOM05D004280 ORTHO05D005059 3.5e-55 218.8 204 63.2
Ca_16394_v3 Cicer arietinum L. HOM05D004280 ORTHO05D005059 2.3e-54 216.1 202 64.4
MBI05_g32463_MAGBIO Magnolia biondii HOM05D004280 ORTHO05D005059 2.3e-54 216.1 139 83.5
TPR.G24159 Trifolium pratense HOM05D004280 ORTHO05D005059 2.3e-54 216.1 209 62.2
arahy.Tifrunner.gnm1.ann1.0AF3IJ Arachis hypogaea HOM05D004280 ORTHO05D005059 3.0e-54 215.7 142 81.0
CiPaw.13G175600 Carya illinoinensis HOM05D004280 ORTHO05D005059 3.0e-54 215.7 205 63.4
Potri.003G218700 Populus trichocarpa HOM05D004280 ORTHO05D005059 3.0e-54 215.7 203 62.6
CANSAT01G2556 Cannabis sativa HOM05D004280 ORTHO05D005059 5.1e-54 214.9 208 63.5
Thecc.09G208500 Theobroma cacao HOM05D004280 ORTHO05D005059 5.1e-54 214.9 162 71.0
HPP92_017297 Vanilla planifolia HOM05D004280 ORTHO05D005059 6.6e-54 214.5 139 81.3
Atru.chr1.3614 Acer truncatum HOM05D004280 ORTHO05D005059 8.7e-54 214.2 203 61.6
ClCG09G019650 Citrullus lanatus HOM05D004280 ORTHO05D005059 1.1e-53 213.8 221 61.1
PGSC0003DMG401025662 Solanum tuberosum HOM05D004280 ORTHO05D005059 1.1e-53 213.8 138 79.7
Cc01_g00630 Coffea canephora HOM05D004280 ORTHO05D005059 1.9e-53 213.0 140 80.0
Sed0023881 Sechium edule HOM05D004280 ORTHO05D005059 1.9e-53 213.0 139 81.3
Hund03769 Selenicereus undatus HOM05D004280 ORTHO05D005059 1.9e-53 213.0 138 81.9
FAN16G1471 Fragaria x ananassa HOM05D004280 ORTHO05D005059 2.5e-53 212.6 235 54.9
Gorai.004G017100 Gossypium raimondii HOM05D004280 ORTHO05D005059 2.5e-53 212.6 157 72.6
Peaxi162Scf01112g00112 Petunia axillaris HOM05D004280 ORTHO05D005059 2.5e-53 212.6 197 62.9
Cc05_g01230 Coffea canephora HOM05D004280 ORTHO05D005059 3.3e-53 212.2 140 79.3
Glyma.11G173655 Glycine max HOM05D004280 ORTHO05D005059 7.3e-53 211.1 204 64.7
Zm00001eb233380 Zea mays HOM05D004280 ORTHO05D005059 7.3e-53 211.1 197 62.4
Gohir.D08G021800 Gossypium hirsutum HOM05D004280 ORTHO05D005059 9.6e-53 210.7 166 68.7
Psat5g102320 Pisum sativum HOM05D004280 ORTHO05D005059 9.6e-53 210.7 203 63.1
CiPaw.16G086400 Carya illinoinensis HOM05D004280 ORTHO05D005059 1.3e-52 210.3 205 62.0
FAN25G1542 Fragaria x ananassa HOM05D004280 ORTHO05D005059 1.3e-52 210.3 139 78.4
Gohir.A08G011300 Gossypium hirsutum HOM05D004280 ORTHO05D005059 1.3e-52 210.3 153 73.2
Ciclev10016632m.g Citrus clementina HOM05D004280 ORTHO05D005059 2.1e-52 209.5 204 62.3
MD11G1008600 Malus domestica HOM05D004280 ORTHO05D005059 2.1e-52 209.5 136 77.2
AT1G55300 Arabidopsis thaliana HOM05D004280 ORTHO05D005059 2.8e-52 209.1 204 60.3
MELO3C021620.2 Cucumis melo HOM05D004280 ORTHO05D005059 2.8e-52 209.1 200 63.0
Os05g0347000 Oryza sativa ssp. japonica HOM05D004280 ORTHO05D005059 2.8e-52 209.1 199 63.3
Duzib170G0536 Durio zibethinus HOM05D004280 ORTHO05D005059 4.8e-52 208.4 162 68.5
Duzib150G0115 Durio zibethinus HOM05D004280 ORTHO05D005059 6.2e-52 208.0 163 69.9
CsaV3_5G026740 Cucumis sativus L. HOM05D004280 ORTHO05D005059 8.1e-52 207.6 200 61.0
Thhalv10011786m.g Eutrema salsugineum HOM05D004280 ORTHO05D005059 8.1e-52 207.6 206 59.7
FAN11G0747 Fragaria x ananassa HOM05D004280 ORTHO05D005059 8.1e-52 207.6 139 77.7
HanXRQChr13g0405321 Helianthus annuus HOM05D004280 ORTHO05D005059 8.1e-52 207.6 146 76.0
MD03G1005700 Malus domestica HOM05D004280 ORTHO05D005059 1.1e-51 207.2 136 76.5
BraA05t20650Z Brassica rapa HOM05D004280 ORTHO05D005059 1.4e-51 206.8 211 57.8
COL.COLO4_35029 Corchorus olitorius HOM05D004280 ORTHO05D005059 1.4e-51 206.8 138 76.1
Potri.001G006300 Populus trichocarpa HOM05D004280 ORTHO05D005059 1.4e-51 206.8 181 64.1
Oeu059672.2 Olea europaea HOM05D004280 ORTHO05D005059 5.3e-51 204.9 122 86.1
Manes.04G095700 Manihot esculenta HOM05D004280 ORTHO05D005059 6.9e-51 204.5 203 61.1
Carub.0001s4380 Capsella rubella HOM05D004280 ORTHO05D005059 2.6e-50 202.6 203 59.1
ATR0681G021 Amborella trichopoda HOM05D004280 ORTHO05D005059 3.4e-50 202.2 139 78.4
C06p10250 Brassica napus HOM05D004280 ORTHO05D005059 3.4e-50 202.2 184 62.0
Eucgr.B03612 Eucalyptus grandis HOM05D004280 ORTHO05D005059 3.4e-50 202.2 139 78.4
BcaB02g10831 Brassica carinata HOM05D004280 ORTHO05D005059 5.8e-50 201.4 139 74.1
CARHR044950 Cardamine hirsuta HOM05D004280 ORTHO05D005059 7.6e-50 201.1 206 58.3
PSO210G5203 Papaver somniferum HOM05D004280 ORTHO05D005059 9.9e-50 200.7 142 76.1
PSO761G0405 Papaver somniferum HOM05D004280 ORTHO05D005059 9.9e-50 200.7 142 76.1
Sabra03G0163100 Salix brachista HOM05D004280 ORTHO05D005059 9.9e-50 200.7 139 74.8
Sp1g40960 Schrenkiella parvula HOM05D004280 ORTHO05D005059 1.3e-49 200.3 211 57.8
THA.LOC104822674 Tarenaya hassleriana HOM05D004280 ORTHO05D005059 1.3e-49 200.3 138 75.4
Aa31LG10G1060 Aethionema arabicum HOM05D004280 ORTHO05D005059 1.7e-49 199.9 173 63.0
A05p17570 Brassica napus HOM05D004280 ORTHO05D005059 2.2e-49 199.5 210 57.1
Sabra01G0004700 Salix brachista HOM05D004280 ORTHO05D005059 3.8e-49 198.7 168 64.3
BcaC08g44186 Brassica carinata HOM05D004280 ORTHO05D005059 6.4e-49 198.0 185 62.2
BolC6t36098H Brassica oleracea HOM05D004280 ORTHO05D005059 6.4e-49 198.0 139 72.7
BolC6t36783H Brassica oleracea HOM05D004280 ORTHO05D005059 6.4e-49 198.0 139 73.4
AagrBONN_evm.TU.Sc2ySwM_344.2640 Anthoceros agrestis HOM05D004280 ORTHO05D005059 1.1e-48 197.2 139 72.7
Mapoly0011s0044 Marchantia polymorpha HOM05D004280 ORTHO05D005059 1.1e-48 197.2 139 74.8
Rhsim02G0077200 Rhododendron simsii HOM05D004280 ORTHO05D005059 1.1e-48 197.2 139 75.5
C06p15910 Brassica napus HOM05D004280 ORTHO05D005059 1.4e-48 196.8 139 71.9
BraA06t23245Z Brassica rapa HOM05D004280 ORTHO05D005059 1.9e-48 196.4 182 61.0
A06p00280 Brassica napus HOM05D004280 ORTHO05D005059 2.4e-48 196.1 139 71.2
SEGI_26181 Sequoiadendron giganteum HOM05D004280 ORTHO05D005059 2.1e-47 193.0 205 56.1
Zm00001eb059570 Zea mays HOM05D004280 ORTHO05D005059 2.7e-47 192.6 141 73.0
SGA_v2.0_scaffold2280G54098 Striga asiatica HOM05D004280 ORTHO05D005059 4.6e-47 191.8 98 96.9
Lalb_Chr08g0230321 Lupinus albus HOM05D004280 ORTHO05D005059 6.0e-47 191.4 151 70.2
SEGI_04342 Sequoiadendron giganteum HOM05D004280 ORTHO05D005059 6.0e-47 191.4 151 67.5
Zm00001eb395740 Zea mays HOM05D004280 ORTHO05D005059 1.0e-46 190.7 137 73.7
Os01g0648500 Oryza sativa ssp. japonica HOM05D004280 ORTHO05D005059 3.0e-46 189.1 185 61.1
HanXRQChr01g0021661 Helianthus annuus HOM05D004280 ORTHO05D005059 6.7e-46 188.0 122 79.5
PGSC0003DMG400009351 Solanum tuberosum HOM05D004280 ORTHO05D005059 3.3e-45 185.7 197 57.4
AUR62032745 Chenopodium quinoa HOM05D004280 ORTHO05D005059 4.3e-45 185.3 160 65.6
Pp3c14_18710 Physcomitrium patens HOM05D004280 ORTHO05D005059 9.6e-45 184.1 139 69.1
AUR62015306 Chenopodium quinoa HOM05D004280 ORTHO05D005059 1.3e-44 183.7 175 60.6
Nitab4.5_0000131g0050 Nicotiana tabacum HOM05D004280 ORTHO05D005059 2.8e-44 182.6 160 63.8
Pp3c1_41986 Physcomitrium patens HOM05D004280 ORTHO05D005059 4.0e-43 178.7 139 69.1
Zm00001eb068820 Zea mays HOM05D004280 ORTHO05D005059 9.0e-43 177.6 176 61.4
CBR_g22380 Chara braunii HOM05D004280 ORTHO05D005059 1.5e-42 176.8 179 57.5
SMO146G0138 Selaginella moellendorffii HOM05D004280 ORTHO05D005059 4.2e-40 168.7 140 60.7
Cc01_g02840 Coffea canephora HOM05D004280 ORTHO05D005059 1.3e-38 163.7 140 67.9
Sed0016974 Sechium edule HOM05D004280 ORTHO05D005059 2.5e-37 159.5 173 56.1
Nitab4.5_0006954g0010 Nicotiana tabacum HOM05D004280 ORTHO05D005059 6.2e-36 154.8 137 63.5
AL1G63340 Arabidopsis lyrata HOM05D004280 ORTHO05D005059 1.1e-35 154.1 157 58.6
Phvul.001G056500 Phaseolus vulgaris HOM05D004280 ORTHO05D005059 1.8e-35 153.3 155 61.3
Cc00_g23960 Coffea canephora HOM05D004280 ORTHO05D005059 2.4e-35 152.9 96 81.2
Haze_22967 Corylus avellana HOM05D004280 ORTHO05D005059 3.1e-35 152.5 106 74.5
Cfa009582 Carpinus fangiana HOM05D004280 ORTHO05D005059 5.3e-35 151.8 227 47.6
SMO169G0010 Selaginella moellendorffii HOM05D004280 ORTHO05D005059 5.3e-35 151.8 140 59.3
Actinidia11301 Actinidia chinensis HOM05D004280 ORTHO05D005059 1.3e-33 147.1 90 84.4
Dinv13451 Davidia involucrata HOM05D004280 ORTHO05D005059 1.9e-32 143.3 93 79.6
Glyma.17G202802 Glycine max HOM05D004280 ORTHO05D005059 9.0e-27 124.4 82 79.3
Atru.chr7.1077 Acer truncatum HOM05D004280 ORTHO05D005059 4.2e-24 115.5 116 59.5
Zm00001eb211560 Zea mays HOM05D004280 ORTHO05D005059 5.5e-24 115.2 151 53.0
AagrBONN_evm.TU.Sc2ySwM_362.2805 Anthoceros agrestis HOM05D004280 ORTHO05D005059 4.3e-21 105.5 103 53.4
Sopen00g013070 Solanum pennellii HOM05D004280 ORTHO05D005059 2.0e-18 96.7 137 48.9
Cc00_g20490 Coffea canephora HOM05D004280 ORTHO05D005059 5.9e-18 95.1 63 77.8
Cre01.g011200 Chlamydomonas reinhardtii HOM05D004280 ORTHO05D005059 5.0e-17 92.0 138 39.1
PRCOL_00003189 Prasinoderma coloniale HOM05D004280 ORTHO05D005059 1.4e-14 84.0 154 33.8
EL10Ac4g09635 Beta vulgaris HOM05D004280 ORTHO05D005059 1.6e-10 70.5 76 53.9
Cfa024345 Carpinus fangiana HOM05D004280 ORTHO05D122617 2.0e-10 70.1 170 28.8
Thhalv10012232m.g Eutrema salsugineum HOM05D004280 ORTHO05D005059 2.5e-08 63.2 68 55.9
Sopen04g030300 Solanum pennellii HOM05D004280 ORTHO05D005059 1.4e-06 57.4 38 78.9
unitig_26.g9445 Utricularia gibba HOM05D004280 ORTHO05D005059 4.0e-06 55.8 65 53.8


User provided reference genes

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