Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold72G24142 Striga asiatica HOM05D014377 ORTHO05D000006 3.8e-174 614.8 313 100.0
SGA_v2.0_scaffold82G26187 Striga asiatica HOM05D000003 ORTHO05D000006 5.8e-26 122.5 83 73.5
SGA_v2.0_scaffold55G19857 Striga asiatica HOM05D014377 ORTHO05D000006 1.0e-25 121.7 73 80.8
SGA_v2.0_scaffold3605G54368 Striga asiatica HOM05D014377 ORTHO05D000006 2.2e-25 120.6 88 70.5
SGA_v2.0_scaffold261G45921 Striga asiatica HOM05D014377 ORTHO05D000006 4.9e-25 119.4 72 79.2
SGA_v2.0_scaffold141G35567 Striga asiatica HOM05D014377 ORTHO05D000006 2.5e-24 117.1 87 67.8
SGA_v2.0_scaffold328G48786 Striga asiatica HOM05D014377 ORTHO05D000006 1.2e-23 114.8 64 87.5
SGA_v2.0_scaffold177G39404 Striga asiatica HOM05D014377 ORTHO05D000006 1.6e-23 114.4 170 45.3
SGA_v2.0_scaffold132G34510 Striga asiatica HOM05D014377 ORTHO05D000006 7.9e-23 112.1 151 49.7
SGA_v2.0_scaffold38G15068 Striga asiatica HOM05D000003 ORTHO05D000006 5.7e-21 105.9 73 68.5
SHI53523 Sapria himalayana HOM05D000003 ORTHO05D000004 1.0e-09 68.6 82 47.6
SHI54645 Sapria himalayana HOM05D000003 ORTHO05D000004 1.3e-09 68.2 82 47.6
SGA_v2.0_scaffold328G48789 Striga asiatica HOM05D000024 ORTHO05D000006 2.1e-07 60.8 39 74.4
SHI47765 Sapria himalayana HOM05D000003 ORTHO05D000004 3.0e-06 57.0 48 50.0
Sabra06G0000400 Salix brachista HOM05D000003 ORTHO05D000004 5.1e-06 56.2 62 38.7
SHI45782 Sapria himalayana HOM05D000024 ORTHO05D000006 5.1e-06 56.2 50 50.0
Atru.chr6.307 Acer truncatum HOM05D000003 ORTHO05D000004 6.7e-06 55.8 73 31.5
PGSC0003DMG400009747 Solanum tuberosum HOM05D000003 ORTHO05D000006 8.8e-06 55.5 62 40.3
Thecc.09G159900 Theobroma cacao HOM05D000024 ORTHO05D000006 8.8e-06 55.5 44 54.5


User provided reference genes

Program Settings