Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold72G24088 Striga asiatica HOM05D000611 ORTHO05D406466 6.5e-89 330.9 189 100.0
SGA_v2.0_scaffold13G06361 Striga asiatica HOM05D000611 ORTHO05D000809 1.9e-80 302.8 183 96.7
SGA_v2.0_scaffold62G21412 Striga asiatica HOM05D000611 ORTHO05D000809 1.6e-42 176.8 182 67.6
MSTRG.27470 Avicennia marina HOM05D000611 ORTHO05D000809 4.5e-29 132.1 205 51.2
MSTRG.9174 Avicennia marina HOM05D000611 ORTHO05D000809 8.7e-25 117.9 207 46.4
SalBow4G2351 Salvia bowleyana HOM05D000611 ORTHO05D000809 2.3e-17 93.2 210 43.3
SGA_v2.0_scaffold478G52238 Striga asiatica HOM05D000611 ORTHO05D000809 3.3e-16 89.4 180 37.8
Oeu043922.1 Olea europaea HOM05D000611 ORTHO05D000809 2.0e-13 80.1 190 37.9
Nitab4.5_0001053g0030 Nicotiana tabacum HOM05D000611 ORTHO05D000809 1.0e-12 77.8 225 39.1
Migut.F01986 Erythranthe guttata HOM05D000611 ORTHO05D000809 2.2e-12 76.6 222 40.5
Nitab4.5_0000534g0020 Nicotiana tabacum HOM05D000611 ORTHO05D000809 5.5e-11 72.0 225 38.2
Oeu033860.1 Olea europaea HOM05D000611 ORTHO05D000809 8.7e-09 64.7 221 35.3
vmacro03199 Vaccinium macrocarpon HOM05D000611 ORTHO05D000809 2.5e-08 63.2 51 62.7
Solyc05g056100.3 Solanum lycopersicum HOM05D000611 ORTHO05D000809 3.3e-08 62.8 60 51.7
Sopen05g034510 Solanum pennellii HOM05D000611 ORTHO05D000809 3.3e-08 62.8 60 51.7
PGSC0003DMG400023459 Solanum tuberosum HOM05D000611 ORTHO05D000809 4.3e-08 62.4 60 51.7
Cc02_g11350 Coffea canephora HOM05D000611 ORTHO05D000809 5.7e-08 62.0 79 43.0
Nitab4.5_0009985g0030 Nicotiana tabacum HOM05D000611 ORTHO05D000809 9.7e-08 61.2 52 55.8
Hma1.2p1_0382F.1_g140090 Hydrangea macrophylla HOM05D000611 ORTHO05D000809 2.8e-07 59.7 55 54.5
CSS0009400 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D000809 3.7e-07 59.3 52 57.7
Dinv31324 Davidia involucrata HOM05D000611 ORTHO05D000809 6.3e-07 58.5 171 39.8
CAN.G694.85 Capsicum annuum HOM05D000611 ORTHO05D000809 1.1e-06 57.8 58 50.0
Nitab4.5_0000476g0060 Nicotiana tabacum HOM05D000611 ORTHO05D000809 1.1e-06 57.8 52 53.8
Peaxi162Scf01175g00029 Petunia axillaris HOM05D000611 ORTHO05D000809 1.1e-06 57.8 218 38.1
Actinidia07138 Actinidia chinensis HOM05D000611 ORTHO05D000809 1.8e-06 57.0 49 59.2
Actinidia12925 Actinidia chinensis HOM05D000611 ORTHO05D000809 1.8e-06 57.0 49 59.2
CSS0007332 Camellia sinensis var. sinensis HOM05D000611 ORTHO05D000809 2.4e-06 56.6 80 43.8
Lsat_1_v5_gn_2_112300 Lactuca sativa HOM05D000611 ORTHO05D000809 2.4e-06 56.6 67 44.8
Dinv32739 Davidia involucrata HOM05D000611 ORTHO05D000809 3.1e-06 56.2 51 49.0
vmacro14435 Vaccinium macrocarpon HOM05D000611 ORTHO05D000809 3.1e-06 56.2 64 51.6
Lsat_1_v5_gn_8_18880 Lactuca sativa HOM05D000611 ORTHO05D000809 6.9e-06 55.1 45 55.6


User provided reference genes

Program Settings