Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold72G24074 Striga asiatica HOM05D006223 ORTHO05D009080 1.7e-97 359.4 191 100.0
Migut.H00350 Erythranthe guttata HOM05D006223 ORTHO05D009080 8.2e-39 164.5 158 56.3
MSTRG.23673 Avicennia marina HOM05D006223 ORTHO05D009080 1.1e-38 164.1 160 56.9
CSS0009729 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 4.1e-38 162.2 156 57.1
Dinv04050 Davidia involucrata HOM05D006223 ORTHO05D009080 4.1e-38 162.2 156 57.7
HanXRQChr15g0472641 Helianthus annuus HOM05D006223 ORTHO05D009080 9.1e-38 161.0 157 59.9
Nitab4.5_0000142g0070 Nicotiana tabacum HOM05D006223 ORTHO05D009080 4.5e-37 158.7 160 56.9
Nitab4.5_0002119g0100 Nicotiana tabacum HOM05D006223 ORTHO05D009080 7.7e-37 157.9 160 56.2
Eucgr.I00706 Eucalyptus grandis HOM05D006223 ORTHO05D009080 3.8e-36 155.6 158 52.5
TAR625G1165 Trochodendron aralioides HOM05D006223 ORTHO05D009080 6.5e-36 154.8 178 51.1
Atru.chr3.1008 Acer truncatum HOM05D006223 ORTHO05D009080 8.5e-36 154.5 161 51.6
Gohir.D11G208400 Gossypium hirsutum HOM05D006223 ORTHO05D009080 8.5e-36 154.5 162 52.5
Lj7A96T45 Lonicera japonica HOM05D006223 ORTHO05D009080 1.1e-35 154.1 156 55.1
Gorai.007G223400 Gossypium raimondii HOM05D006223 ORTHO05D009080 1.4e-35 153.7 162 51.9
Manes.12G113900 Manihot esculenta HOM05D006223 ORTHO05D009080 1.4e-35 153.7 156 56.4
Cc06_g22830 Coffea canephora HOM05D006223 ORTHO05D009080 1.9e-35 153.3 160 53.8
Gohir.A11G215000 Gossypium hirsutum HOM05D006223 ORTHO05D009080 2.5e-35 152.9 157 53.5
CAN.G1075.35 Capsicum annuum HOM05D006223 ORTHO05D009080 4.2e-35 152.1 160 55.6
Lsat_1_v5_gn_3_86181 Lactuca sativa HOM05D006223 ORTHO05D009080 4.2e-35 152.1 166 53.0
Sed0023944 Sechium edule HOM05D006223 ORTHO05D009080 4.2e-35 152.1 158 51.9
DCAR_025799 Daucus carota HOM05D006223 ORTHO05D009080 9.4e-35 151.0 176 50.0
Actinidia11984 Actinidia chinensis HOM05D006223 ORTHO05D009080 2.1e-34 149.8 164 51.8
Duzib147G0613 Durio zibethinus HOM05D006223 ORTHO05D009080 2.1e-34 149.8 163 50.9
ECA246G3554 Erigeron canadensis HOM05D006223 ORTHO05D009080 2.1e-34 149.8 158 53.8
CiPaw.01G004700 Carya illinoinensis HOM05D006223 ORTHO05D009080 3.6e-34 149.1 155 52.3
Sabra01G0139200 Salix brachista HOM05D006223 ORTHO05D009080 3.6e-34 149.1 156 54.5
Sopen02g036940 Solanum pennellii HOM05D006223 ORTHO05D009080 3.6e-34 149.1 160 54.4
Peaxi162Scf00548g00643 Petunia axillaris HOM05D006223 ORTHO05D009080 4.6e-34 148.7 149 57.0
Nn5g30588 Nelumbo nucifera HOM05D006223 ORTHO05D009080 6.1e-34 148.3 156 50.6
Solyc02g092390.3 Solanum lycopersicum HOM05D006223 ORTHO05D009080 1.0e-33 147.5 160 54.4
Ca_22107_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 1.8e-33 146.7 182 46.2
Ca_22114_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 1.8e-33 146.7 182 46.2
Haze_15285 Corylus avellana HOM05D006223 ORTHO05D009080 1.8e-33 146.7 155 52.3
PGSC0003DMG400021418 Solanum tuberosum HOM05D006223 ORTHO05D009080 2.3e-33 146.4 160 53.8
PGR004G2352 Punica granatum HOM05D006223 ORTHO05D009080 3.9e-33 145.6 184 47.8
GSVIVG01000109001 Vitis vinifera HOM05D006223 ORTHO05D009080 3.9e-33 145.6 157 51.0
TWI73G0604 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 6.7e-33 144.8 155 52.3
Glyma.17G160900 Glycine max HOM05D006223 ORTHO05D009080 8.8e-33 144.4 180 47.8
Thecc.01G072400 Theobroma cacao HOM05D006223 ORTHO05D009080 1.1e-32 144.1 155 51.0
GSVIVG01000118001 Vitis vinifera HOM05D006223 ORTHO05D009080 1.1e-32 144.1 157 50.3
Aqoxy5G00869 Aquilegia oxysepala HOM05D006223 ORTHO05D009080 2.6e-32 142.9 155 49.0
PSO170G6824 Papaver somniferum HOM05D006223 ORTHO05D009080 2.6e-32 142.9 180 50.0
Psat4g081960 Pisum sativum HOM05D006223 ORTHO05D009080 2.6e-32 142.9 156 48.1
Cfa004130 Carpinus fangiana HOM05D006223 ORTHO05D009080 3.3e-32 142.5 153 51.0
Cpa.g.sc6.19 Carica papaya HOM05D006223 ORTHO05D009080 5.7e-32 141.7 155 50.3
Medtr4g097030 Medicago truncatula HOM05D006223 ORTHO05D009080 7.4e-32 141.4 185 44.9
VMungo0251G3324 Vigna mungo HOM05D006223 ORTHO05D009080 9.7e-32 141.0 159 50.3
AUR62040240 Chenopodium quinoa HOM05D006223 ORTHO05D009080 2.2e-31 139.8 158 51.3
TWI09G0585 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 2.2e-31 139.8 155 52.9
AUR62004007 Chenopodium quinoa HOM05D006223 ORTHO05D009080 2.8e-31 139.4 156 51.3
FAN28G1261 Fragaria x ananassa HOM05D006223 ORTHO05D009080 2.8e-31 139.4 156 49.4
Potri.001G172500 Populus trichocarpa HOM05D006223 ORTHO05D009080 3.7e-31 139.0 162 50.6
MELO3C020909.2 Cucumis melo HOM05D006223 ORTHO05D009080 4.8e-31 138.7 177 45.2
FAN26G2055 Fragaria x ananassa HOM05D006223 ORTHO05D009080 4.8e-31 138.7 184 45.1
TPR.G24252 Trifolium pratense HOM05D006223 ORTHO05D009080 4.8e-31 138.7 159 49.1
Phvul.003G235100 Phaseolus vulgaris HOM05D006223 ORTHO05D009080 8.2e-31 137.9 159 49.1
vmacro05408 Vaccinium macrocarpon HOM05D006223 ORTHO05D009080 8.2e-31 137.9 181 48.6
Lj4g0019733 Lotus japonicus HOM05D006223 ORTHO05D009080 1.8e-30 136.7 161 46.6
THA.LOC104827599 Tarenaya hassleriana HOM05D006223 ORTHO05D009080 3.1e-30 136.0 157 48.4
HPP92_024913 Vanilla planifolia HOM05D006223 ORTHO05D009080 4.1e-30 135.6 159 50.9
Glyma.05G105500 Glycine max HOM05D006223 ORTHO05D009080 5.3e-30 135.2 156 50.0
Hund16399 Selenicereus undatus HOM05D006223 ORTHO05D009080 1.5e-29 133.7 157 48.4
FAN19G0818 Fragaria x ananassa HOM05D006223 ORTHO05D009080 2.6e-29 132.9 155 46.5
FvH4_1g17670 Fragaria vesca HOM05D006223 ORTHO05D009080 3.4e-29 132.5 156 46.2
Ciclev10026365m.g Citrus clementina HOM05D006223 ORTHO05D009080 5.9e-29 131.7 155 46.5
CDE06G0771 Ceratophyllum demersum HOM05D006223 ORTHO05D009080 7.7e-29 131.3 151 45.0
Hma1.2p1_0852F.1_g228470 Hydrangea macrophylla HOM05D006223 ORTHO05D009080 2.9e-28 129.4 120 60.0
Ah.03g140550 Amaranthus hybridus HOM05D006223 ORTHO05D009080 3.8e-28 129.0 168 44.0
Lalb_Chr05g0225861 Lupinus albus HOM05D006223 ORTHO05D009080 3.8e-28 129.0 154 46.8
Rhsim10G0099700 Rhododendron simsii HOM05D006223 ORTHO05D009080 5.0e-28 128.6 172 45.3
RcHm_v2.0_Chr2g0108001 Rosa chinensis HOM05D006223 ORTHO05D009080 5.0e-28 128.6 162 45.1
MD15G1297100 Malus domestica HOM05D006223 ORTHO05D009080 3.2e-27 125.9 159 44.0
arahy.Tifrunner.gnm1.ann1.83HTFG Arachis hypogaea HOM05D006223 ORTHO05D009080 5.5e-27 125.2 189 42.9
arahy.Tifrunner.gnm1.ann1.BP3FRD Arachis hypogaea HOM05D006223 ORTHO05D009080 1.6e-26 123.6 187 42.2
Aa31LG4G18340 Aethionema arabicum HOM05D006223 ORTHO05D009080 2.7e-26 122.9 151 47.0
Prupe.6G221000 Prunus persica HOM05D006223 ORTHO05D009080 2.7e-26 122.9 158 44.3
Zm00001eb400790 Zea mays HOM05D006223 ORTHO05D009080 2.7e-26 122.9 155 44.5
CANSAT01G0277 Cannabis sativa HOM05D006223 ORTHO05D009080 3.6e-26 122.5 163 43.6
AL5G29900 Arabidopsis lyrata HOM05D006223 ORTHO05D009080 6.1e-26 121.7 150 45.3
AT3G49890 Arabidopsis thaliana HOM05D006223 ORTHO05D009080 7.9e-26 121.3 178 40.4
ATR1153G042 Amborella trichopoda HOM05D006223 ORTHO05D009080 2.3e-25 119.8 156 46.2
Sp5g12220 Schrenkiella parvula HOM05D006223 ORTHO05D009080 1.7e-23 113.6 151 42.4
CARHR158970 Cardamine hirsuta HOM05D006223 ORTHO05D009080 2.2e-23 113.2 150 40.7
CSS0032370 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 3.7e-23 112.5 95 66.3
ClCG02G012630 Citrullus lanatus HOM05D003401 ORTHO05D003906 3.7e-23 112.5 167 41.9
A03p47580 Brassica napus HOM05D006223 ORTHO05D009080 1.1e-22 110.9 152 42.1
Thhalv10010709m.g Eutrema salsugineum HOM05D006223 ORTHO05D009080 1.4e-22 110.5 151 41.7
BraA03t13871Z Brassica rapa HOM05D006223 ORTHO05D009080 1.8e-22 110.2 151 42.4
SEGI_10369 Sequoiadendron giganteum HOM05D006223 ORTHO05D009080 1.8e-22 110.2 161 45.3
Os03g0201200 Oryza sativa ssp. japonica HOM05D006223 ORTHO05D009080 1.6e-21 107.1 155 40.6
C07p45560 Brassica napus HOM05D006223 ORTHO05D009080 2.0e-21 106.7 152 41.4
BolC7t45077H Brassica oleracea HOM05D006223 ORTHO05D009080 2.0e-21 106.7 152 41.4
Carub.0005s1625 Capsella rubella HOM05D006223 ORTHO05D009080 1.5e-19 100.5 150 37.3
EL10Ac6g15621 Beta vulgaris HOM05D006223 ORTHO05D009080 3.6e-18 95.9 163 38.0
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 7.0e-14 81.6 73 65.8
Sc16g0002890 Simmondsia chinensis HOM05D006223 ORTHO05D009080 1.0e-12 77.8 90 46.7
FAN23G0832 Fragaria x ananassa HOM05D006223 ORTHO05D009080 8.5e-12 74.7 126 39.7
HPP92_024909 Vanilla planifolia HOM05D006223 ORTHO05D009080 8.5e-12 74.7 69 60.9
Pp3c5_6560 Physcomitrium patens HOM05D006223 ORTHO05D009080 7.2e-11 71.6 200 32.5
AagrBONN_evm.TU.Sc2ySwM_228.3102 Anthoceros agrestis HOM05D004796 ORTHO05D006527 1.2e-10 70.9 173 34.7
C08p24920 Brassica napus HOM05D006223 ORTHO05D009080 4.4e-08 62.4 105 32.4
BcaB05g23172 Brassica carinata HOM05D006223 ORTHO05D009080 5.7e-08 62.0 138 31.9
BolC8t50110H Brassica oleracea HOM05D006223 ORTHO05D009080 7.5e-08 61.6 106 33.0
CSS0023916 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 1.7e-07 60.5 55 50.9
SHI12778 Sapria himalayana HOM05D006223 ORTHO05D009080 4.1e-06 55.8 145 30.3


User provided reference genes

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