Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 8.1e-189 663.7 362 100.0
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 5.4e-108 395.2 384 62.5
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 1.4e-100 370.5 370 62.2
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 1.0e-98 364.4 396 60.1
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 2.1e-96 356.7 382 58.9
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 4.9e-93 345.5 366 60.1
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 2.0e-86 323.6 381 54.3
SGA_v2.0_scaffold935G53736 Striga asiatica HOM05D002428 ORTHO05D008664 2.2e-85 320.1 191 100.0
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 5.3e-79 298.9 369 55.6
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 2.2e-77 293.5 402 52.5
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 2.9e-77 293.1 393 53.2
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 8.4e-77 291.6 374 53.5
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 2.1e-75 287.0 329 59.6
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 6.0e-75 285.4 355 55.8
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 1.0e-74 284.6 386 52.3
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 3.9e-74 282.7 347 55.9
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 1.1e-71 274.6 401 49.4
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 6.9e-71 271.9 400 50.8
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 2.6e-70 270.0 356 53.1
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.0e-69 268.1 387 50.4
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 1.3e-69 267.7 304 51.6
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 4.9e-69 265.8 292 53.4
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 6.5e-69 265.4 353 52.4
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 4.2e-68 262.7 364 51.4
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 5.5e-68 262.3 399 48.6
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 7.9e-67 258.5 299 52.8
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 1.0e-66 258.1 375 50.7
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 8.7e-66 255.0 447 46.5
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 2.5e-65 253.4 293 52.2
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 2.5e-65 253.4 337 54.3
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 7.4e-65 251.9 305 51.1
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 9.7e-65 251.5 344 53.5
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 1.3e-64 251.1 385 49.1
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 8.2e-64 248.4 269 54.3
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 3.1e-63 246.5 269 53.9
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 6.9e-63 245.4 353 51.3
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 7.6e-62 241.9 372 51.9
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 1.7e-61 240.7 408 45.8
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 1.7e-61 240.7 399 49.1
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 2.9e-61 240.0 305 49.8
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 1.4e-60 237.7 383 49.6
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 1.9e-60 237.3 337 53.1
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 1.6e-59 234.2 305 48.2
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 2.1e-59 233.8 400 47.0
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 2.7e-59 233.4 366 49.2
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 1.0e-58 231.5 379 50.1
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 1.3e-58 231.1 352 49.7
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 1.8e-58 230.7 376 48.9
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 1.5e-57 227.6 408 43.9
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 1.9e-57 227.3 232 54.3
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 7.4e-57 225.3 385 47.5
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 1.3e-56 224.6 404 44.3
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 1.3e-56 224.6 321 45.8
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 3.7e-56 223.0 409 43.0
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 6.3e-56 222.2 339 43.4
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 8.2e-56 221.9 371 48.8
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 1.8e-55 220.7 297 49.5
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 3.1e-55 219.9 283 48.8
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 4.1e-55 219.5 326 45.1
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 5.3e-55 219.2 341 50.4
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 6.9e-55 218.8 370 46.2
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 9.1e-55 218.4 275 50.2
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 3.4e-54 216.5 386 47.7
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 5.9e-54 215.7 417 43.9
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 5.9e-54 215.7 379 46.4
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 7.7e-54 215.3 388 47.2
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 7.7e-54 215.3 386 47.7
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 1.0e-53 214.9 345 50.7
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 1.1e-52 211.5 389 47.0
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 1.2e-51 208.0 374 47.1
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 1.6e-51 207.6 381 43.8
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 2.1e-51 207.2 394 45.7
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 7.9e-51 205.3 392 45.4
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 1.8e-50 204.1 279 47.7
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 8.8e-50 201.8 325 51.1
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 2.0e-49 200.7 358 47.2
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 2.6e-49 200.3 293 45.4
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 2.6e-49 200.3 268 45.9
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 3.3e-49 199.9 325 49.8
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 1.3e-48 198.0 202 56.4
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 1.7e-48 197.6 389 45.0
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 2.8e-48 196.8 281 46.3
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 3.7e-48 196.4 387 45.0
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 3.7e-48 196.4 231 51.5
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.8e-47 194.1 340 47.1
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 1.8e-47 194.1 279 47.3
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 3.1e-47 193.4 283 46.6
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 1.2e-46 191.4 220 50.5
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 2.0e-46 190.7 286 45.1
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.3e-45 188.0 297 41.1
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 8.5e-45 185.3 182 58.2
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 9.4e-44 181.8 339 48.4
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 2.1e-43 180.6 196 53.6
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 5.2e-42 176.0 196 52.6
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 1.1e-41 174.9 234 47.0
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 5.7e-41 172.6 263 44.1
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 2.2e-40 170.6 280 45.0
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 2.8e-40 170.2 369 42.3
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 3.1e-39 166.8 197 53.3
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 3.5e-38 163.3 199 47.2
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 1.9e-36 157.5 244 44.3
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 6.7e-34 149.1 295 39.3
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 2.0e-33 147.5 174 50.6
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 4.4e-33 146.4 224 38.4
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 8.2e-32 142.1 223 41.7
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 2.4e-31 140.6 245 41.6
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 5.3e-31 139.4 205 40.5
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 1.3e-29 134.8 149 53.7
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 2.9e-29 133.7 208 38.9
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 8.5e-29 132.1 351 40.2
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 2.6e-25 120.6 222 39.2
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 1.3e-24 118.2 146 47.9
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 1.1e-23 115.2 155 43.9
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 5.4e-23 112.8 211 35.5
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 3.5e-14 83.6 49 81.6
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 5.6e-12 76.3 51 76.5


User provided reference genes

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