Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold71G24009 Striga asiatica HOM05D003943 ORTHO05D004753 3.1e-145 518.5 261 100.0
unitig_32.g11085 Utricularia gibba HOM05D003943 ORTHO05D004753 1.9e-134 482.6 260 93.5
MSTRG.10894 Avicennia marina HOM05D003943 ORTHO05D004753 2.1e-133 479.2 261 92.3
Migut.I01176 Erythranthe guttata HOM05D003943 ORTHO05D004753 4.6e-133 478.0 261 92.0
Oeu049654.1 Olea europaea HOM05D003943 ORTHO05D004753 1.7e-132 476.1 261 91.6
SalBow6G5742 Salvia bowleyana HOM05D003943 ORTHO05D004753 2.3e-132 475.7 261 91.6
Dinv20358 Davidia involucrata HOM05D003943 ORTHO05D004753 6.6e-132 474.2 261 90.8
Nn2g14305 Nelumbo nucifera HOM05D003943 ORTHO05D004753 6.6e-132 474.2 261 91.6
CiPaw.10G017400 Carya illinoinensis HOM05D003943 ORTHO05D004753 1.1e-131 473.4 261 90.0
Manes.01G025400 Manihot esculenta HOM05D003943 ORTHO05D004753 2.5e-131 472.2 261 88.9
Oeu039454.1 Olea europaea HOM05D003943 ORTHO05D004753 3.3e-131 471.9 260 91.2
ClCG01G015010 Citrullus lanatus HOM05D003943 ORTHO05D004753 4.3e-131 471.5 261 90.0
Manes.08G033500 Manihot esculenta HOM05D003943 ORTHO05D004753 5.6e-131 471.1 261 88.5
BcaB05g21673 Brassica carinata HOM05D003943 ORTHO05D004753 1.2e-130 469.9 261 88.9
TWI77G0554 Tripterygium wilfordii HOM05D003943 ORTHO05D004753 1.2e-130 469.9 261 88.9
TAR623G0676 Trochodendron aralioides HOM05D003943 ORTHO05D004753 1.6e-130 469.5 261 89.7
TAR633G0404 Trochodendron aralioides HOM05D003943 ORTHO05D004753 2.1e-130 469.2 261 90.0
Sed0023950 Sechium edule HOM05D003943 ORTHO05D004753 2.8e-130 468.8 261 89.7
Potri.016G070400 Populus trichocarpa HOM05D003943 ORTHO05D004753 3.6e-130 468.4 261 88.5
TWI74G1172 Tripterygium wilfordii HOM05D003943 ORTHO05D004753 3.6e-130 468.4 261 88.5
C09p70420 Brassica napus HOM05D003943 ORTHO05D004753 6.2e-130 467.6 260 88.8
BolC9t59788H Brassica oleracea HOM05D003943 ORTHO05D004753 6.2e-130 467.6 260 88.8
Sed0024685 Sechium edule HOM05D003943 ORTHO05D004753 6.2e-130 467.6 261 89.3
THA.LOC104826802 Tarenaya hassleriana HOM05D003943 ORTHO05D004753 8.1e-130 467.2 261 89.3
Sabra16G0070600 Salix brachista HOM05D003943 ORTHO05D004753 1.4e-129 466.5 261 88.1
Sabra16G0072800 Salix brachista HOM05D003943 ORTHO05D004753 1.4e-129 466.5 261 88.1
GSVIVG01011153001 Vitis vinifera HOM05D003943 ORTHO05D004753 1.4e-129 466.5 260 90.0
C02p02670 Brassica napus HOM05D003943 ORTHO05D004753 1.8e-129 466.1 261 88.1
BolC2t06233H Brassica oleracea HOM05D003943 ORTHO05D004753 1.8e-129 466.1 261 88.1
THA.LOC104809953 Tarenaya hassleriana HOM05D003943 ORTHO05D004753 1.8e-129 466.1 261 89.3
Prupe.4G241300 Prunus persica HOM05D003943 ORTHO05D004753 2.3e-129 465.7 261 88.5
vmacro18760 Vaccinium macrocarpon HOM05D003943 ORTHO05D004753 2.3e-129 465.7 265 88.7
Atru.chr12.911 Acer truncatum HOM05D003943 ORTHO05D004753 3.1e-129 465.3 261 89.3
BcaC03g13169 Brassica carinata HOM05D003943 ORTHO05D004753 3.1e-129 465.3 261 87.7
CDE10G1025 Ceratophyllum demersum HOM05D003943 ORTHO05D004753 3.1e-129 465.3 261 89.3
Lj6A21G25 Lonicera japonica HOM05D003943 ORTHO05D004753 3.1e-129 465.3 261 89.3
Sopen09g036280 Solanum pennellii HOM05D003943 ORTHO05D004753 3.1e-129 465.3 261 89.3
Ciclev10012509m.g Citrus clementina HOM05D003943 ORTHO05D004753 4.0e-129 464.9 261 88.9
Potri.006G203400 Populus trichocarpa HOM05D003943 ORTHO05D004753 4.0e-129 464.9 261 88.1
A10p30010 Brassica napus HOM05D003943 ORTHO05D004753 5.2e-129 464.5 259 88.8
BraA10t45041Z Brassica rapa HOM05D003943 ORTHO05D004753 5.2e-129 464.5 259 88.8
Cpa.g.sc104.32 Carica papaya HOM05D003943 ORTHO05D004753 5.2e-129 464.5 261 88.5
Haze_03432 Corylus avellana HOM05D003943 ORTHO05D004753 5.2e-129 464.5 261 88.9
Haze_20185 Corylus avellana HOM05D003943 ORTHO05D004753 5.2e-129 464.5 261 88.9
MELO3C024586.2 Cucumis melo HOM05D003943 ORTHO05D004753 5.2e-129 464.5 261 88.1
Aqoxy1G00659 Aquilegia oxysepala HOM05D003943 ORTHO05D004753 6.8e-129 464.2 261 87.4
Actinidia21868 Actinidia chinensis HOM05D003943 ORTHO05D004753 8.9e-129 463.8 261 89.7
BraA02t04878Z Brassica rapa HOM05D003943 ORTHO05D004753 8.9e-129 463.8 260 88.1
Gohir.A09G134200 Gossypium hirsutum HOM05D003943 ORTHO05D004753 8.9e-129 463.8 261 87.4
Gorai.006G149400 Gossypium raimondii HOM05D003943 ORTHO05D004753 8.9e-129 463.8 261 87.4
PGSC0003DMG400021625 Solanum tuberosum HOM05D003943 ORTHO05D004753 8.9e-129 463.8 261 88.9
CsaV3_6G041100 Cucumis sativus L. HOM05D003943 ORTHO05D004753 1.2e-128 463.4 261 88.5
Eucgr.K02620 Eucalyptus grandis HOM05D003943 ORTHO05D004753 1.2e-128 463.4 261 88.5
Rhsim08G0248000 Rhododendron simsii HOM05D003943 ORTHO05D004753 1.2e-128 463.4 261 88.1
AL6G16440 Arabidopsis lyrata HOM05D003943 ORTHO05D004753 1.5e-128 463.0 261 88.1
Lj6A3G40 Lonicera japonica HOM05D003943 ORTHO05D004753 1.5e-128 463.0 260 89.2
QL07p036748 Quercus lobata HOM05D003943 ORTHO05D004753 2.0e-128 462.6 260 88.8
Atru.chr8.1362 Acer truncatum HOM05D003943 ORTHO05D004753 2.6e-128 462.2 261 88.1
Actinidia38793 Actinidia chinensis HOM05D003943 ORTHO05D004753 3.4e-128 461.8 261 88.9
ATR0772G207 Amborella trichopoda HOM05D003943 ORTHO05D004753 3.4e-128 461.8 261 87.4
Duzib093G1950 Durio zibethinus HOM05D003943 ORTHO05D004753 3.4e-128 461.8 261 87.4
Gohir.D01G191300 Gossypium hirsutum HOM05D003943 ORTHO05D004753 3.4e-128 461.8 261 86.6
Gorai.002G235200 Gossypium raimondii HOM05D003943 ORTHO05D004753 3.4e-128 461.8 261 86.6
RcHm_v2.0_Chr2g0122251 Rosa chinensis HOM05D003943 ORTHO05D004753 3.4e-128 461.8 261 88.5
RcHm_v2.0_Chr4g0409741 Rosa chinensis HOM05D003943 ORTHO05D004753 3.4e-128 461.8 261 88.5
Thecc.05G104300 Theobroma cacao HOM05D003943 ORTHO05D004753 3.4e-128 461.8 261 87.0
PGR004G2105 Punica granatum HOM05D003943 ORTHO05D004753 7.6e-128 460.7 261 87.7
PGR142G4032 Punica granatum HOM05D003943 ORTHO05D004753 7.6e-128 460.7 261 87.7
Cc04_g00390 Coffea canephora HOM05D003943 ORTHO05D004753 9.9e-128 460.3 269 87.4
FvH4_1g24730 Fragaria vesca HOM05D003943 ORTHO05D004753 9.9e-128 460.3 261 88.1
FvH4_1g24810 Fragaria vesca HOM05D003943 ORTHO05D004753 9.9e-128 460.3 261 88.1
FAN19G3070 Fragaria x ananassa HOM05D003943 ORTHO05D004753 9.9e-128 460.3 261 88.1
AT5G06360 Arabidopsis thaliana HOM05D003943 ORTHO05D004753 1.3e-127 459.9 261 87.7
Hund10875 Selenicereus undatus HOM05D003943 ORTHO05D004753 1.3e-127 459.9 261 87.7
Cfa010504 Carpinus fangiana HOM05D003943 ORTHO05D004753 1.7e-127 459.5 261 88.1
Lsat_1_v5_gn_4_88760 Lactuca sativa HOM05D003943 ORTHO05D004753 1.7e-127 459.5 261 87.7
MD05G1235300 Malus domestica HOM05D003943 ORTHO05D004753 1.7e-127 459.5 261 87.4
CSS0000599 Camellia sinensis var. sinensis HOM05D003943 ORTHO05D004753 2.2e-127 459.1 258 89.1
TPR.G5876 Trifolium pratense HOM05D003943 ORTHO05D004753 2.2e-127 459.1 261 86.2
COL.COLO4_29575 Corchorus olitorius HOM05D003943 ORTHO05D004753 2.9e-127 458.8 261 87.7
HanXRQChr17g0533251 Helianthus annuus HOM05D003943 ORTHO05D004753 2.9e-127 458.8 261 88.5
Gohir.A01G201400 Gossypium hirsutum HOM05D003943 ORTHO05D004753 3.7e-127 458.4 261 86.2
Sp6g36490 Schrenkiella parvula HOM05D003943 ORTHO05D004753 4.9e-127 458.0 261 87.0
CANSAT64G2459 Cannabis sativa HOM05D003943 ORTHO05D004753 6.4e-127 457.6 261 87.0
HanXRQChr09g0277391 Helianthus annuus HOM05D003943 ORTHO05D004753 8.4e-127 457.2 261 88.1
Lsat_1_v5_gn_6_32361 Lactuca sativa HOM05D003943 ORTHO05D004753 8.4e-127 457.2 260 87.7
Ca_11700_v3 Cicer arietinum L. HOM05D003943 ORTHO05D004753 1.1e-126 456.8 261 85.8
HPP92_002146 Vanilla planifolia HOM05D003943 ORTHO05D004753 1.1e-126 456.8 256 88.3
Nitab4.5_0008073g0030 Nicotiana tabacum HOM05D003943 ORTHO05D004753 1.9e-126 456.1 261 87.4
arahy.Tifrunner.gnm1.ann1.07MWYB Arachis hypogaea HOM05D003943 ORTHO05D004753 3.2e-126 455.3 261 85.8
arahy.Tifrunner.gnm1.ann1.T05T6P Arachis hypogaea HOM05D003943 ORTHO05D004753 3.2e-126 455.3 261 85.8
Hma1.2p1_1104F.1_g257380 Hydrangea macrophylla HOM05D003943 ORTHO05D004753 3.2e-126 455.3 259 88.8
Carub.0006s0525 Capsella rubella HOM05D003943 ORTHO05D004753 4.1e-126 454.9 261 87.0
ECA233G4676 Erigeron canadensis HOM05D003943 ORTHO05D004753 4.1e-126 454.9 261 87.4
Aa31sc52G210 Aethionema arabicum HOM05D003943 ORTHO05D004753 5.4e-126 454.5 261 86.6
MD10G1211300 Malus domestica HOM05D003943 ORTHO05D004753 5.4e-126 454.5 261 86.6
AUR62036383 Chenopodium quinoa HOM05D003943 ORTHO05D004753 9.2e-126 453.8 261 86.6
Peaxi162Scf00286g00330 Petunia axillaris HOM05D003943 ORTHO05D004753 1.2e-125 453.4 264 87.1
VMungo0331G0074 Vigna mungo HOM05D003943 ORTHO05D004753 1.2e-125 453.4 261 85.8
VMungo0720G1310 Vigna mungo HOM05D003943 ORTHO05D004753 1.2e-125 453.4 261 85.8
Ca_16636_v3 Cicer arietinum L. HOM05D003943 ORTHO05D004753 2.1e-125 452.6 261 85.4
Glyma.02G196900 Glycine max HOM05D003943 ORTHO05D004753 2.1e-125 452.6 261 85.8
Sabra06G0156600 Salix brachista HOM05D003943 ORTHO05D004753 2.1e-125 452.6 285 80.7
Phvul.010G103000 Phaseolus vulgaris HOM05D003943 ORTHO05D004753 3.5e-125 451.8 261 85.8
Phvul.007G268100 Phaseolus vulgaris HOM05D003943 ORTHO05D004753 4.6e-125 451.4 261 85.8
Glyma.10G081400 Glycine max HOM05D003943 ORTHO05D004753 7.8e-125 450.7 261 85.1
Medtr0508s0010 Medicago truncatula HOM05D003943 ORTHO05D004753 7.8e-125 450.7 261 84.7
Glyma.10G002300 Glycine max HOM05D003943 ORTHO05D004753 1.0e-124 450.3 261 85.1
Ah.12g059190 Amaranthus hybridus HOM05D003943 ORTHO05D004753 1.3e-124 449.9 261 84.7
Pp3c7_2280 Physcomitrium patens HOM05D003943 ORTHO05D004753 1.7e-124 449.5 261 85.1
Psat6g114680 Pisum sativum HOM05D003943 ORTHO05D004753 2.3e-124 449.1 261 84.7
CARHR207110 Cardamine hirsuta HOM05D003943 ORTHO05D004753 3.0e-124 448.7 261 84.3
Thhalv10014439m.g Eutrema salsugineum HOM05D003943 ORTHO05D004753 3.0e-124 448.7 261 86.2
Lalb_Chr11g0067891 Lupinus albus HOM05D003943 ORTHO05D004753 5.1e-124 448.0 261 85.1
Lalb_Chr02g0144091 Lupinus albus HOM05D003943 ORTHO05D004753 6.6e-124 447.6 261 84.7
EL10Ac5g12966 Beta vulgaris HOM05D003943 ORTHO05D004753 1.1e-123 446.8 260 86.2
AUR62030745 Chenopodium quinoa HOM05D003943 ORTHO05D004753 1.1e-123 446.8 256 86.3
Lj1g0010263 Lotus japonicus HOM05D003943 ORTHO05D004753 1.9e-123 446.0 261 83.1
PSO339G3654 Papaver somniferum HOM05D003943 ORTHO05D004753 1.9e-123 446.0 261 83.5
PSO384G4082 Papaver somniferum HOM05D003943 ORTHO05D004753 1.9e-123 446.0 261 83.9
Medtr3g088865 Medicago truncatula HOM05D003943 ORTHO05D004753 2.5e-123 445.7 261 82.8
Mapoly0020s0123 Marchantia polymorpha HOM05D003943 ORTHO05D004753 7.3e-123 444.1 261 84.3
Os07g0673100 Oryza sativa ssp. japonica HOM05D003943 ORTHO05D004753 1.2e-122 443.4 261 84.7
SMO367G0573 Selaginella moellendorffii HOM05D003943 ORTHO05D004753 1.2e-122 443.4 261 83.5
FAN23G0735 Fragaria x ananassa HOM05D003943 ORTHO05D004753 8.1e-122 440.7 277 81.9
TPR.G2813 Trifolium pratense HOM05D003943 ORTHO05D004753 1.4e-121 439.9 276 80.1
AagrBONN_evm.TU.Sc2ySwM_369.90 Anthoceros agrestis HOM05D003943 ORTHO05D004753 2.4e-121 439.1 261 82.0
CiPaw.09G020900 Carya illinoinensis HOM05D003943 ORTHO05D004753 2.6e-120 435.6 240 90.8
CBR_g12036 Chara braunii HOM05D003943 ORTHO05D004753 4.9e-119 431.4 261 80.5
Zm00001eb111290 Zea mays HOM05D003943 ORTHO05D004753 1.7e-116 422.9 261 80.8
Zm00001eb330440 Zea mays HOM05D003943 ORTHO05D004753 1.7e-116 422.9 261 80.8
FAN19G1372 Fragaria x ananassa HOM05D003943 ORTHO05D004753 3.3e-115 418.7 241 87.1
MCO03G138 Micromonas commoda HOM05D003943 ORTHO05D004753 3.3e-115 418.7 261 76.6
FAN28G2380 Fragaria x ananassa HOM05D003943 ORTHO05D004753 9.6e-115 417.2 241 86.7
Lj2g0010046 Lotus japonicus HOM05D003943 ORTHO05D004753 3.6e-114 415.2 261 79.7
Cre12.g507300 Chlamydomonas reinhardtii HOM05D003943 ORTHO05D004753 7.6e-112 407.5 261 77.0
PRCOL_00000915 Prasinoderma coloniale HOM05D003943 ORTHO05D004753 9.9e-112 407.1 261 77.8
Dinv37798 Davidia involucrata HOM05D003943 ORTHO05D004753 2.2e-111 406.0 213 93.4
unitig_748.g7832 Utricularia gibba HOM05D003943 ORTHO05D004753 1.2e-109 400.2 201 97.5
Gohir.D09G130700 Gossypium hirsutum HOM05D003943 ORTHO05D004753 3.5e-109 398.7 261 78.5
Sc14g0006610 Simmondsia chinensis HOM05D003943 ORTHO05D004753 1.9e-107 392.9 222 88.7
PGSC0003DMG400029099 Solanum tuberosum HOM05D003943 ORTHO05D004753 2.1e-106 389.4 261 77.8
AagrBONN_evm.TU.Sc2ySwM_340.394 Anthoceros agrestis HOM05D003943 ORTHO05D004753 6.2e-106 387.9 266 74.4
CAN.G710.48 Capsicum annuum HOM05D003943 ORTHO05D004753 4.5e-104 381.7 309 68.9
Rhsim05G0206200 Rhododendron simsii HOM05D003943 ORTHO05D004753 4.9e-103 378.3 261 76.2
FAN26G0481 Fragaria x ananassa HOM05D003943 ORTHO05D004753 5.5e-102 374.8 337 61.7
DCAR_017903 Daucus carota HOM05D003943 ORTHO05D004753 9.3e-102 374.0 240 80.0
DCAR_016668 Daucus carota HOM05D003943 ORTHO05D004753 1.2e-101 373.6 254 75.6
SEGI_04875 Sequoiadendron giganteum HOM05D003943 ORTHO05D004753 1.0e-100 370.5 195 90.8
Aa31LG3G5080 Aethionema arabicum HOM05D003943 ORTHO05D004753 2.5e-99 365.9 199 90.5
Haze_27191 Corylus avellana HOM05D003943 ORTHO05D004753 3.8e-95 352.1 260 66.5
Nitab4.5_0003291g0080 Nicotiana tabacum HOM05D003943 ORTHO05D004753 3.0e-92 342.4 257 74.3
FAN23G1436 Fragaria x ananassa HOM05D003943 ORTHO05D004753 9.0e-89 330.9 177 89.8
Peaxi162Scf01149g00220 Petunia axillaris HOM05D003943 ORTHO05D004753 4.3e-83 312.0 161 93.2
Cfa024104 Carpinus fangiana HOM05D003943 ORTHO05D123184 6.9e-73 278.1 229 61.1
TPR.G6300 Trifolium pratense HOM05D003943 ORTHO05D004753 1.1e-67 260.8 240 60.8
BcaNung06320 Brassica carinata HOM05D003943 ORTHO05D004753 6.7e-60 235.0 143 84.6
BcaC06g32370 Brassica carinata HOM05D003943 ORTHO05D004753 4.4e-59 232.3 142 83.8
CDE10G0220 Ceratophyllum demersum HOM05D003943 ORTHO05D004753 9.1e-57 224.6 113 93.8
CDE10G0110 Ceratophyllum demersum HOM05D003943 ORTHO05D004753 2.5e-54 216.5 135 83.7
SHI12410 Sapria himalayana HOM05D003943 ORTHO05D004753 4.1e-49 199.1 98 93.9
RcHm_v2.0_Chr7g0216551 Rosa chinensis HOM05D003943 ORTHO05D004753 6.3e-42 175.3 271 45.8
Lsat_1_v5_gn_8_162181 Lactuca sativa HOM05D003943 ORTHO05D004753 3.1e-41 172.9 109 78.9
Duzib106G1686 Durio zibethinus HOM05D003943 ORTHO05D004753 9.2e-41 171.4 196 52.0
RcHm_v2.0_Chr7g0216591 Rosa chinensis HOM05D003943 ORTHO05D004753 7.7e-40 168.3 108 78.7
EL10Ac3g06422 Beta vulgaris HOM05D003943 ORTHO05D004753 1.9e-38 163.7 135 64.4
Lj9C540G13 Lonicera japonica HOM05D003943 ORTHO05D004753 1.6e-37 160.6 195 50.3
HanXRQChr03g0072971 Helianthus annuus HOM05D003943 ORTHO05D004753 6.1e-37 158.7 92 84.8
BcaC01g01015 Brassica carinata HOM05D003943 ORTHO05D004753 6.8e-36 155.2 100 81.0
SHI12413 Sapria himalayana HOM05D003943 ORTHO05D004753 2.8e-29 133.3 81 81.5
Lsat_1_v5_gn_6_65181 Lactuca sativa HOM05D003943 ORTHO05D000236 1.5e-27 127.5 104 67.3
Actinidia21636 Actinidia chinensis HOM05D003943 ORTHO05D004753 2.2e-26 123.6 111 64.0
SHI12416 Sapria himalayana HOM05D001600 ORTHO05D001502 1.1e-17 94.7 64 76.6
RcHm_v2.0_Chr7g0216581 Rosa chinensis HOM05D003943 ORTHO05D004753 8.6e-15 85.1 81 59.3
CAN.G1001.28 Capsicum annuum HOM05D003943 ORTHO05D005733 7.6e-11 72.0 59 62.7
C03p87270 Brassica napus HOM05D000836 ORTHO05D000709 6.4e-10 68.9 85 47.1
SHI17182 Sapria himalayana HOM05D000004 ORTHO05D367797 1.6e-08 64.3 56 62.5
Nitab4.5_0006519g0020 Nicotiana tabacum HOM05D000032 ORTHO05D005217 2.7e-08 63.5 52 67.3
BcaC05g26689 Brassica carinata HOM05D003943 ORTHO05D004753 3.3e-06 56.6 38 65.8
C04p30500 Brassica napus HOM05D002284 ORTHO05D033292 7.3e-06 55.5 34 73.5


User provided reference genes

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