Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold71G23984 Striga asiatica HOM05D007715 ORTHO05D009760 1.3e-142 509.6 239 100.0
SalBow6G7190 Salvia bowleyana HOM05D007715 ORTHO05D009760 1.1e-112 410.2 237 78.9
Oeu049631.2 Olea europaea HOM05D007715 ORTHO05D009760 7.7e-103 377.5 237 70.5
Oeu049632.1 Olea europaea HOM05D007715 ORTHO05D009760 7.7e-103 377.5 237 70.5
CSS0043564 Camellia sinensis var. sinensis HOM05D007715 ORTHO05D009760 1.1e-101 373.6 238 71.0
Hma1.2p1_1111F.1_g258440 Hydrangea macrophylla HOM05D007715 ORTHO05D009760 1.0e-99 367.1 229 72.5
Migut.I01201 Erythranthe guttata HOM05D007715 ORTHO05D009760 1.3e-97 360.1 236 71.2
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 2.4e-96 355.9 224 71.4
Thecc.06G056700 Theobroma cacao HOM05D007715 ORTHO05D009760 7.0e-96 354.4 221 71.9
EL10Ac7g18154 Beta vulgaris HOM05D007715 ORTHO05D009760 1.2e-95 353.6 224 70.5
Manes.14G008300 Manihot esculenta HOM05D007715 ORTHO05D009760 1.6e-95 353.2 237 67.1
GSVIVG01029551001 Vitis vinifera HOM05D007715 ORTHO05D009760 1.6e-95 353.2 237 68.4
Cc04_g00030 Coffea canephora HOM05D007715 ORTHO05D009760 5.9e-95 351.3 238 66.0
Ciclev10032622m.g Citrus clementina HOM05D007715 ORTHO05D009760 1.3e-94 350.1 224 70.5
MBI16_g18218_MAGBIO Magnolia biondii HOM05D007715 ORTHO05D009760 1.3e-94 350.1 228 68.4
Potri.008G004500 Populus trichocarpa HOM05D007715 ORTHO05D009760 1.3e-94 350.1 222 71.2
vmacro18742 Vaccinium macrocarpon HOM05D007715 ORTHO05D009760 2.2e-94 349.4 240 67.1
MD09G1165400 Malus domestica HOM05D007715 ORTHO05D009760 3.8e-94 348.6 237 66.2
TAR383G0241 Trochodendron aralioides HOM05D007715 ORTHO05D009760 6.5e-94 347.8 237 69.2
Actinidia38809 Actinidia chinensis HOM05D007715 ORTHO05D009760 8.5e-94 347.4 235 68.1
RcHm_v2.0_Chr2g0149371 Rosa chinensis HOM05D007715 ORTHO05D009760 4.2e-93 345.1 224 69.2
Duzib235G0054 Durio zibethinus HOM05D007715 ORTHO05D009760 7.2e-93 344.4 229 68.6
Gohir.D06G121500 Gossypium hirsutum HOM05D007715 ORTHO05D009760 1.4e-91 340.1 233 64.8
FvH4_6g36931 Fragaria vesca HOM05D007715 ORTHO05D009760 1.8e-91 339.7 228 67.1
CANSAT01G2071 Cannabis sativa HOM05D007715 ORTHO05D009760 4.0e-91 338.6 237 64.1
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.2e-90 337.0 224 67.9
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.2e-90 337.0 228 67.1
Gorai.010G141800 Gossypium raimondii HOM05D007715 ORTHO05D009760 2.6e-90 335.9 217 67.7
Nn2g12750 Nelumbo nucifera HOM05D007715 ORTHO05D009760 2.6e-90 335.9 224 67.0
Eucgr.F04031 Eucalyptus grandis HOM05D007715 ORTHO05D009760 3.4e-90 335.5 219 68.0
AUR62025668 Chenopodium quinoa HOM05D007715 ORTHO05D009760 4.4e-90 335.1 222 67.6
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 5.7e-90 334.7 222 68.0
MD17G1162300 Malus domestica HOM05D007715 ORTHO05D009760 9.8e-90 334.0 227 65.6
PGR102G0299 Punica granatum HOM05D007715 ORTHO05D009760 9.8e-90 334.0 222 66.7
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.2e-89 332.8 224 67.4
Haze_16178 Corylus avellana HOM05D007715 ORTHO05D009760 4.8e-89 331.6 226 65.5
Lsat_1_v5_gn_4_89140 Lactuca sativa HOM05D007715 ORTHO05D009760 6.3e-89 331.3 238 63.0
Cfa003439 Carpinus fangiana HOM05D007715 ORTHO05D009760 1.8e-88 329.7 219 66.7
Atru.BG.168.p Acer truncatum HOM05D007715 ORTHO05D009760 5.4e-88 328.2 211 69.2
Hund18594 Selenicereus undatus HOM05D007715 ORTHO05D009760 5.4e-88 328.2 242 63.2
AUR62001337 Chenopodium quinoa HOM05D007715 ORTHO05D009760 7.0e-88 327.8 226 65.9
CiPaw.02G129300 Carya illinoinensis HOM05D007715 ORTHO05D009760 1.2e-87 327.0 229 64.2
PGSC0003DMG400009165 Solanum tuberosum HOM05D007715 ORTHO05D009760 2.7e-87 325.9 232 65.1
Aqoxy7G02738 Aquilegia oxysepala HOM05D007715 ORTHO05D009760 4.5e-87 325.1 225 65.3
Cpa.g.sc176.1 Carica papaya HOM05D007715 ORTHO05D009760 8.6e-86 320.9 244 60.2
Rhsim08G0250500 Rhododendron simsii HOM05D007715 ORTHO05D009760 3.3e-85 318.9 241 62.2
PSO423G0174 Papaver somniferum HOM05D007715 ORTHO05D009760 2.1e-84 316.2 225 64.4
Medtr4g005360 Medicago truncatula HOM05D007715 ORTHO05D009760 4.7e-84 315.1 221 63.3
CDE05G1192 Ceratophyllum demersum HOM05D007715 ORTHO05D004987 6.8e-83 311.2 226 61.9
CiPaw.01G208900 Carya illinoinensis HOM05D007715 ORTHO05D009760 8.9e-83 310.8 223 62.3
MSTRG.22499 Avicennia marina HOM05D007715 ORTHO05D009760 3.7e-81 305.4 183 74.9
QL05p088896 Quercus lobata HOM05D007715 ORTHO05D009760 3.7e-81 305.4 280 52.5
Zm00001eb102140 Zea mays HOM05D007715 ORTHO05D009760 1.8e-80 303.1 224 59.4
Lalb_Chr01g0011671 Lupinus albus HOM05D007715 ORTHO05D009760 2.4e-80 302.8 222 61.3
Psat7g265440 Pisum sativum HOM05D007715 ORTHO05D009760 3.1e-80 302.4 222 60.4
ATR0626G044 Amborella trichopoda HOM05D007715 ORTHO05D009760 5.4e-80 301.6 226 60.6
HPP92_017384 Vanilla planifolia HOM05D007715 ORTHO05D009760 8.6e-78 294.3 205 62.9
Lj3g0002381 Lotus japonicus HOM05D007715 ORTHO05D009760 2.5e-77 292.7 222 59.0
Sabra08G0002100 Salix brachista HOM05D007715 ORTHO05D009760 1.8e-75 286.6 226 61.5
Duzib192G0685 Durio zibethinus HOM05D007715 ORTHO05D009760 1.2e-74 283.9 176 72.2
Sp3g18290 Schrenkiella parvula HOM05D007715 ORTHO05D009760 1.5e-74 283.5 224 56.2
SEGI_32597 Sequoiadendron giganteum HOM05D007715 ORTHO05D009760 2.6e-74 282.7 231 58.0
AagrBONN_evm.TU.Sc2ySwM_228.4113 Anthoceros agrestis HOM05D007715 ORTHO05D009760 6.0e-71 271.6 224 57.1
Mapoly0008s0087 Marchantia polymorpha HOM05D007715 ORTHO05D009760 3.0e-70 269.2 237 54.0
Nitab4.5_0005739g0020 Nicotiana tabacum HOM05D007715 ORTHO05D009760 3.9e-70 268.9 178 70.8
Glyma.08G224700 Glycine max HOM05D007715 ORTHO05D009760 6.6e-70 268.1 224 58.5
Pp3c3_690 Physcomitrium patens HOM05D007715 ORTHO05D009760 7.3e-69 264.6 221 55.2
C05p44060 Brassica napus HOM05D007715 ORTHO05D009760 2.8e-68 262.7 225 53.3
BraA05t21742Z Brassica rapa HOM05D007715 ORTHO05D009760 3.6e-68 262.3 231 52.4
Thhalv10020156m.g Eutrema salsugineum HOM05D003198 ORTHO05D009760 6.2e-68 261.5 220 54.5
A05p28660 Brassica napus HOM05D007715 ORTHO05D009760 1.8e-67 260.0 231 51.9
VMungo0331G1382 Vigna mungo HOM05D007715 ORTHO05D009760 8.9e-67 257.7 232 54.3
BolC5t33128H Brassica oleracea HOM05D007715 ORTHO05D009760 1.9e-64 250.0 218 52.3
Lj9C542G6 Lonicera japonica HOM05D007715 ORTHO05D009760 2.3e-62 243.0 237 51.1
Phvul.010G164200 Phaseolus vulgaris HOM05D007715 ORTHO05D009760 1.5e-61 240.4 236 51.3
FAN20G1905 Fragaria x ananassa HOM05D007715 ORTHO05D009760 1.1e-59 234.2 156 69.2
Dinv20335 Davidia involucrata HOM05D007715 ORTHO05D009760 5.8e-50 201.8 135 65.9
COL.COLO4_31152 Corchorus olitorius HOM05D007715 ORTHO05D009760 8.4e-49 198.0 111 79.3
Nitab4.5_0005664g0070 Nicotiana tabacum HOM05D007715 ORTHO05D009760 4.3e-45 185.7 200 46.0
Prupe.3G023100 Prunus persica HOM05D007715 ORTHO05D009760 3.1e-43 179.5 125 63.2
Gohir.A06G117200 Gossypium hirsutum HOM05D007715 ORTHO05D009760 4.0e-43 179.1 136 58.1
Peaxi162Scf00038g02642 Petunia axillaris HOM05D007715 ORTHO05D009760 4.0e-43 179.1 102 78.4
PSO423G0098 Papaver somniferum HOM05D007715 ORTHO05D009760 9.0e-43 177.9 136 60.3
Carub.0003s2020 Capsella rubella HOM05D007715 ORTHO05D009760 4.4e-42 175.6 132 59.8
SMO201G0133 Selaginella moellendorffii HOM05D007715 ORTHO05D009760 5.6e-37 158.7 194 41.8
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 2.7e-31 139.8 135 53.3
Sopen03g041710 Solanum pennellii HOM05D007715 ORTHO05D009760 5.6e-21 105.5 218 34.9
TPR.G38822 Trifolium pratense HOM05D007715 ORTHO05D009760 6.2e-20 102.1 86 54.7
TPR.G38750 Trifolium pratense HOM05D007715 ORTHO05D009760 9.0e-19 98.2 85 47.1
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 1.3e-17 94.4 87 58.6
Os09g0497600 Oryza sativa ssp. japonica HOM05D007715 ORTHO05D009760 4.9e-17 92.4 70 48.6
Medtr4g005380 Medicago truncatula HOM05D007715 ORTHO05D009760 4.2e-16 89.4 76 44.7
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 1.0e-14 84.7 58 63.8
AL3G33970 Arabidopsis lyrata HOM05D007715 ORTHO05D009760 1.4e-06 57.8 49 55.1
Solyc03g123970.1 Solanum lycopersicum HOM05D007715 ORTHO05D009760 5.1e-06 55.8 51 58.8


User provided reference genes

Program Settings