Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold71G23973 Striga asiatica HOM05D007236 ORTHO05D009150 4.1e-218 761.1 396 100.0
Dinv20327 Davidia involucrata HOM05D007236 ORTHO05D009150 4.1e-125 452.2 392 63.8
Oeu039939.2 Olea europaea HOM05D007236 ORTHO05D009150 3.5e-124 449.1 328 72.9
QL05p088536 Quercus lobata HOM05D007236 ORTHO05D009150 1.0e-123 447.6 364 64.6
GSVIVG01029561001 Vitis vinifera HOM05D007236 ORTHO05D009150 5.0e-123 445.3 399 60.4
TAR636G0504 Trochodendron aralioides HOM05D007236 ORTHO05D009150 4.2e-122 442.2 389 61.2
Manes.06G179100 Manihot esculenta HOM05D007236 ORTHO05D009150 7.2e-122 441.4 382 63.1
Psat7g265040 Pisum sativum HOM05D007236 ORTHO05D009150 2.1e-121 439.9 390 62.3
Eucgr.J03184 Eucalyptus grandis HOM05D007236 ORTHO05D009150 3.6e-121 439.1 410 59.8
unitig_32.g11550 Utricularia gibba HOM05D007236 ORTHO05D009150 5.2e-120 435.3 393 58.5
Thecc.06G055000 Theobroma cacao HOM05D007236 ORTHO05D009150 8.8e-120 434.5 385 62.1
VMungo0331G1697 Vigna mungo HOM05D007236 ORTHO05D009150 8.8e-120 434.5 378 62.2
Nn5g27081 Nelumbo nucifera HOM05D007236 ORTHO05D009150 1.1e-119 434.1 388 63.7
Actinidia31123 Actinidia chinensis HOM05D007236 ORTHO05D009150 3.3e-119 432.6 390 61.5
Lj3g0020822 Lotus japonicus HOM05D007236 ORTHO05D009150 3.3e-119 432.6 374 62.8
Duzib160G0063 Durio zibethinus HOM05D007236 ORTHO05D009150 1.7e-118 430.3 388 61.3
TWI18G0405 Tripterygium wilfordii HOM05D007236 ORTHO05D009150 3.7e-118 429.1 381 60.9
THA.LOC104812331 Tarenaya hassleriana HOM05D007236 ORTHO05D009150 4.8e-118 428.7 377 59.9
Prupe.3G024200 Prunus persica HOM05D007236 ORTHO05D009150 1.4e-117 427.2 381 60.9
Potri.008G003800 Populus trichocarpa HOM05D007236 ORTHO05D009150 2.4e-117 426.4 372 62.1
PGR031G2337 Punica granatum HOM05D007236 ORTHO05D009150 7.0e-117 424.9 386 59.8
FAN09G1281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 1.2e-116 424.1 388 60.1
FAN14G0281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 2.6e-116 422.9 386 59.3
Sp5g33940 Schrenkiella parvula HOM05D007236 ORTHO05D009150 3.5e-116 422.5 369 61.0
Hund05669 Selenicereus undatus HOM05D007236 ORTHO05D009150 7.7e-116 421.4 374 60.2
RcHm_v2.0_Chr2g0149221 Rosa chinensis HOM05D007236 ORTHO05D009150 1.0e-115 421.0 345 64.3
FvH4_6g36830 Fragaria vesca HOM05D007236 ORTHO05D009150 1.3e-115 420.6 386 59.1
AUR62025709 Chenopodium quinoa HOM05D007236 ORTHO05D009150 5.0e-115 418.7 397 56.7
Glyma.08G225400 Glycine max HOM05D007236 ORTHO05D009150 8.5e-115 417.9 377 61.3
Sopen03g041760 Solanum pennellii HOM05D007236 ORTHO05D009150 1.5e-114 417.2 394 59.4
Sabra08G0001500 Salix brachista HOM05D007236 ORTHO05D009150 1.9e-114 416.8 384 59.9
Solyc03g124030.4 Solanum lycopersicum HOM05D007236 ORTHO05D009150 2.5e-114 416.4 394 59.4
FAN05G3464 Fragaria x ananassa HOM05D007236 ORTHO05D009150 1.2e-113 414.1 414 56.8
Ca_20979_v3 Cicer arietinum L. HOM05D007236 ORTHO05D009150 3.6e-113 412.5 389 59.4
Gohir.A06G116300 Gossypium hirsutum HOM05D007236 ORTHO05D009150 3.6e-113 412.5 381 60.4
AL2G39340 Arabidopsis lyrata HOM05D007236 ORTHO05D009150 6.1e-113 411.8 366 60.7
Carub.0002s2575 Capsella rubella HOM05D007236 ORTHO05D009150 8.0e-113 411.4 369 60.2
BcaB02g07186 Brassica carinata HOM05D007236 ORTHO05D009150 1.0e-112 411.0 372 59.9
Gorai.010G141500 Gossypium raimondii HOM05D007236 ORTHO05D009150 1.0e-112 411.0 392 59.4
Cc04_g00020 Coffea canephora HOM05D007236 ORTHO05D009150 2.3e-112 409.8 341 63.6
Medtr4g005300 Medicago truncatula HOM05D007236 ORTHO05D009150 2.3e-112 409.8 337 65.6
MD09G1166500 Malus domestica HOM05D007236 ORTHO05D009150 3.0e-112 409.5 377 60.5
CARHR072510 Cardamine hirsuta HOM05D007236 ORTHO05D009150 4.0e-112 409.1 365 60.0
Migut.I01208 Erythranthe guttata HOM05D007236 ORTHO05D009150 4.0e-112 409.1 309 69.9
Lsat_1_v5_gn_5_137160 Lactuca sativa HOM05D007236 ORTHO05D009150 1.5e-111 407.1 359 61.3
Glyma.07G001600 Glycine max HOM05D007236 ORTHO05D009150 2.6e-111 406.4 376 58.8
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 3.3e-111 406.0 371 59.3
MELO3C026715.2 Cucumis melo HOM05D007236 ORTHO05D009150 3.3e-111 406.0 378 59.8
AT1G78915 Arabidopsis thaliana HOM05D007236 ORTHO05D009150 1.3e-110 404.1 387 56.8
arahy.Tifrunner.gnm1.ann1.I3AU87 Arachis hypogaea HOM05D007236 ORTHO05D009150 2.8e-110 402.9 381 60.1
CsaV3_3G030460 Cucumis sativus L. HOM05D007236 ORTHO05D009150 2.8e-110 402.9 378 59.8
Aqoxy5G00022 Aquilegia oxysepala HOM05D007236 ORTHO05D009150 6.3e-110 401.7 386 57.0
A07p27420 Brassica napus HOM05D007236 ORTHO05D009150 2.4e-109 399.8 399 55.9
ClCG07G014680 Citrullus lanatus HOM05D007236 ORTHO05D009150 2.4e-109 399.8 376 57.2
ECA234G1409 Erigeron canadensis HOM05D007236 ORTHO05D009150 7.0e-109 398.3 342 61.1
BolC6t38197H Brassica oleracea HOM05D007236 ORTHO05D009150 1.2e-108 397.5 382 57.6
Aa31LG4G2080 Aethionema arabicum HOM05D007236 ORTHO05D009150 2.0e-108 396.7 368 58.2
HanXRQChr10g0311241 Helianthus annuus HOM05D007236 ORTHO05D009150 2.7e-108 396.4 382 57.9
arahy.Tifrunner.gnm1.ann1.QM8PPU Arachis hypogaea HOM05D007236 ORTHO05D009150 5.9e-108 395.2 324 66.0
MSTRG.22498 Avicennia marina HOM05D007236 ORTHO05D009150 2.2e-107 393.3 395 57.5
C06p30340 Brassica napus HOM05D007236 ORTHO05D009150 1.6e-105 387.1 404 54.2
TPR.G38815 Trifolium pratense HOM05D007236 ORTHO05D009150 3.6e-105 386.0 332 64.2
COL.COLO4_31136 Corchorus olitorius HOM05D007236 ORTHO05D009150 2.0e-103 380.2 353 60.6
Sed0012172 Sechium edule HOM05D007236 ORTHO05D009150 2.0e-103 380.2 371 56.6
BraA07t30383Z Brassica rapa HOM05D007236 ORTHO05D009150 4.4e-103 379.0 390 54.6
CDE05G3570 Ceratophyllum demersum HOM05D007236 ORTHO05D008204 5.4e-101 372.1 379 54.6
Zm00001eb305180 Zea mays HOM05D007236 ORTHO05D009150 4.5e-100 369.0 316 61.4
DCAR_016079 Daucus carota HOM05D007236 ORTHO05D009150 1.6e-97 360.5 379 53.0
AUR62001326 Chenopodium quinoa HOM05D007236 ORTHO05D009150 2.8e-97 359.8 334 57.5
Sc12g0011240 Simmondsia chinensis HOM05D000518 ORTHO05D000737 7.5e-95 351.7 273 65.2
SEGI_39602 Sequoiadendron giganteum HOM05D007236 ORTHO05D009150 6.6e-91 338.6 364 52.2
vmacro12583 Vaccinium macrocarpon HOM05D007236 ORTHO05D009150 8.6e-91 338.2 343 54.5
ATR0215G005 Amborella trichopoda HOM05D007236 ORTHO05D009150 6.1e-89 332.0 363 54.0
Thhalv10018805m.g Eutrema salsugineum HOM05D007236 ORTHO05D009150 1.5e-87 327.4 369 52.3
Peaxi162Scf00038g02668 Petunia axillaris HOM05D007236 ORTHO05D009150 1.9e-85 320.5 314 56.7
CiPaw.01G207800 Carya illinoinensis HOM05D007236 ORTHO05D009150 3.0e-83 313.2 292 59.6
Gohir.D06G121200 Gossypium hirsutum HOM05D007236 ORTHO05D009150 6.6e-83 312.0 381 50.4
Sc12g0011350 Simmondsia chinensis HOM05D007236 ORTHO05D009150 1.9e-82 310.5 238 65.5
PSO170G4015 Papaver somniferum HOM05D007236 ORTHO05D009150 7.8e-76 288.5 389 46.5
Lalb_Chr01g0011631 Lupinus albus HOM05D007236 ORTHO05D009150 1.3e-75 287.7 215 68.8
PSO357G0009 Papaver somniferum HOM05D007236 ORTHO05D009150 1.3e-75 287.7 383 46.5
Rhsim02G0000100 Rhododendron simsii HOM05D007236 ORTHO05D009150 1.3e-75 287.7 445 42.0
SMO117G0135 Selaginella moellendorffii HOM05D007236 ORTHO05D009150 5.8e-71 272.3 338 45.3
CAN.G790.6 Capsicum annuum HOM05D007236 ORTHO05D009150 7.1e-69 265.4 208 64.9
Haze_16198 Corylus avellana HOM05D007236 ORTHO05D009150 9.2e-69 265.0 270 55.2
Lj9A543T71 Lonicera japonica HOM05D007236 ORTHO05D009150 9.5e-66 255.0 186 71.0
Ciclev10013942m.g Citrus clementina HOM05D007236 ORTHO05D009150 3.1e-64 250.0 186 69.4
FAN02G2413 Fragaria x ananassa HOM05D007236 ORTHO05D009150 5.8e-63 245.7 295 50.2
Pp3c5_19050 Physcomitrium patens HOM05D007236 ORTHO05D009150 2.2e-62 243.8 387 41.9
AagrBONN_evm.TU.Sc2ySwM_117.3884 Anthoceros agrestis HOM05D007236 ORTHO05D009150 2.1e-60 237.3 363 40.8
Mapoly0075s0045 Marchantia polymorpha HOM05D007236 ORTHO05D009150 3.5e-60 236.5 358 41.1
EL10Ac7g18131 Beta vulgaris HOM05D007236 ORTHO05D009150 4.6e-52 209.5 256 48.4
Atru.chr1.2627 Acer truncatum HOM05D007236 ORTHO05D009150 2.1e-44 184.1 181 55.2
Cpa.g.sc176.15 Carica papaya HOM05D007236 ORTHO05D009150 1.6e-41 174.5 216 48.6
Nitab4.5_0000499g0120 Nicotiana tabacum HOM05D007236 ORTHO05D009150 2.2e-38 164.1 112 71.4
Atru.chr1.2630 Acer truncatum HOM05D007236 ORTHO05D009150 1.3e-33 148.3 125 61.6
Ciclev10013945m.g Citrus clementina HOM05D007236 ORTHO05D009150 1.3e-33 148.3 118 66.1
PRCOL_00005889 Prasinoderma coloniale HOM05D007236 ORTHO05D009150 2.1e-33 147.5 340 33.5
CANSAT01G0299 Cannabis sativa HOM05D007236 ORTHO05D009150 1.8e-27 127.9 103 62.1
Lj9A543T70 Lonicera japonica HOM05D007236 ORTHO05D009150 1.8e-27 127.9 99 67.7
Cre12.g554103 Chlamydomonas reinhardtii HOM05D007236 ORTHO05D009150 1.8e-24 117.9 357 27.5
CSS0013667 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 1.5e-23 114.8 87 65.5
Os07g0287100 Oryza sativa ssp. japonica HOM05D007236 ORTHO05D009150 8.5e-22 109.0 147 44.9
CSS0007704 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 4.3e-18 96.7 82 61.0
MCO09G516 Micromonas commoda HOM05D007236 ORTHO05D009150 4.5e-15 86.7 339 25.4
Haze_16199 Corylus avellana HOM05D007236 ORTHO05D009150 3.9e-11 73.6 100 47.0
Nitab4.5_0000499g0130 Nicotiana tabacum HOM05D007236 ORTHO05D009150 3.7e-09 67.0 47 70.2
Aa31sc24G50 Aethionema arabicum HOM05D002308 ORTHO05D002535 6.3e-09 66.2 111 39.6
Peaxi162Scf00039g00073 Petunia axillaris HOM05D001509 ORTHO05D001361 2.4e-08 64.3 207 25.1
Nitab4.5_0010623g0010 Nicotiana tabacum HOM05D001509 ORTHO05D001361 3.1e-08 63.9 242 23.6
Nitab4.5_0002995g0040 Nicotiana tabacum HOM05D001509 ORTHO05D001361 7.0e-08 62.8 255 24.3
THA.LOC104823250 Tarenaya hassleriana HOM05D001509 ORTHO05D001361 4.5e-07 60.1 226 24.3
Aqoxy4G03054 Aquilegia oxysepala HOM05D001509 ORTHO05D001361 1.3e-06 58.5 215 26.0
PSO339G1527 Papaver somniferum HOM05D001509 ORTHO05D001361 1.7e-06 58.2 242 24.0
Solyc09g005740.3 Solanum lycopersicum HOM05D001509 ORTHO05D001361 1.7e-06 58.2 241 24.5
MD12G1136200 Malus domestica HOM05D001509 ORTHO05D001361 2.2e-06 57.8 227 26.4
Sopen09g001630 Solanum pennellii HOM05D001509 ORTHO05D001361 2.9e-06 57.4 241 24.5
PSO206G0027 Papaver somniferum HOM05D001509 ORTHO05D001361 6.5e-06 56.2 244 23.0


User provided reference genes

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