Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 8.1e-66 253.8 150 100.0
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 7.9e-29 131.0 142 49.3
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 1.5e-27 126.7 131 50.4
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 7.4e-27 124.4 120 57.5
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 7.4e-27 124.4 117 54.7
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 5.5e-22 108.2 138 42.8
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 1.2e-21 107.1 140 41.4
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 4.6e-21 105.1 151 40.4
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 1.3e-20 103.6 137 41.6
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 2.3e-20 102.8 139 42.4
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 3.0e-20 102.4 139 40.3
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 8.7e-20 100.9 133 41.4
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 1.9e-19 99.8 151 42.4
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 2.5e-19 99.4 130 42.3
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 2.2e-18 96.3 135 41.5
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 4.8e-18 95.1 140 40.7
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 6.3e-18 94.7 155 38.1
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 6.3e-18 94.7 130 40.0
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 8.2e-18 94.4 157 38.9
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 8.2e-18 94.4 118 44.1
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 1.4e-17 93.6 155 37.4
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 1.4e-17 93.6 135 41.5
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 1.5e-16 90.1 129 39.5
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 1.5e-16 90.1 123 43.1
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 2.6e-16 89.4 135 44.4
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 2.6e-16 89.4 123 41.5
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 3.4e-16 89.0 143 35.7
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 3.4e-16 89.0 154 37.0
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 3.4e-16 89.0 148 37.2
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 3.4e-16 89.0 130 36.9
SalBow7G1183 Salvia bowleyana HOM05D003223 ORTHO05D004865 3.4e-16 89.0 102 48.0
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 4.5e-16 88.6 138 37.0
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 4.5e-16 88.6 151 34.4
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 4.5e-16 88.6 149 38.9
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 5.9e-16 88.2 153 34.6
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 5.9e-16 88.2 153 34.6
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 7.6e-16 87.8 119 42.0
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 1.3e-15 87.0 152 35.5
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 1.3e-15 87.0 128 39.8
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 2.2e-15 86.3 119 43.7
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 3.8e-15 85.5 132 34.1
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 3.8e-15 85.5 157 37.6
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 3.8e-15 85.5 157 37.6
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 3.8e-15 85.5 157 37.6
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 3.8e-15 85.5 149 34.9
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 3.8e-15 85.5 138 37.7
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 3.8e-15 85.5 138 34.8
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 5.0e-15 85.1 154 33.8
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 6.5e-15 84.7 131 37.4
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 8.5e-15 84.3 138 38.4
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 8.5e-15 84.3 133 39.8
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 8.5e-15 84.3 154 33.8
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 1.1e-14 84.0 151 37.1
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 1.4e-14 83.6 132 37.9
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 1.4e-14 83.6 154 33.8
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 1.4e-14 83.6 124 41.1
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 1.9e-14 83.2 127 37.8
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 1.9e-14 83.2 158 37.3
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 2.5e-14 82.8 135 34.8
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 3.2e-14 82.4 140 38.6
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 3.2e-14 82.4 123 42.3
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 3.2e-14 82.4 148 35.1
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 4.2e-14 82.0 132 37.1
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 7.2e-14 81.3 120 38.3
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 9.3e-14 80.9 132 36.4
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 1.2e-13 80.5 132 37.1
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 1.2e-13 80.5 138 36.2
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 2.7e-13 79.3 142 33.8
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 3.6e-13 79.0 157 33.1
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 6.1e-13 78.2 114 39.5
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 7.9e-13 77.8 149 33.6
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 1.0e-12 77.4 104 44.2
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 1.0e-12 77.4 111 43.2
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 1.8e-12 76.6 127 33.9
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 1.8e-12 76.6 137 35.0
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 2.3e-12 76.3 123 35.8
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 2.3e-12 76.3 131 35.1
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 2.3e-12 76.3 112 43.8
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 3.0e-12 75.9 131 35.9
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 3.0e-12 75.9 127 33.1
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 3.0e-12 75.9 127 33.1
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 3.0e-12 75.9 114 36.8
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 3.9e-12 75.5 156 32.7
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 5.1e-12 75.1 135 33.3
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 6.7e-12 74.7 131 35.1
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 8.8e-12 74.3 142 31.7
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 8.8e-12 74.3 114 38.6
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 1.1e-11 73.9 143 32.2
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 1.1e-11 73.9 142 31.0
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 1.1e-11 73.9 145 42.1
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 1.1e-11 73.9 145 42.1
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 1.5e-11 73.6 139 35.3
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 1.9e-11 73.2 139 35.3
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 3.3e-11 72.4 111 38.7
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 9.7e-11 70.9 128 35.9
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 3.7e-10 68.9 114 33.3
SalBow1G0981 Salvia bowleyana HOM05D007364 ORTHO05D009275 4.8e-10 68.6 93 40.9
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 6.3e-10 68.2 114 36.0
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 1.8e-09 66.6 148 29.7
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 6.9e-09 64.7 95 38.9
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 2.0e-08 63.2 148 29.1
CiPaw.01G207600 Carya illinoinensis HOM05D007364 ORTHO05D009275 7.7e-08 61.2 114 37.7
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 3.8e-07 58.9 116 34.5


User provided reference genes

Program Settings