Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold71G23934 Striga asiatica HOM05D008031 ORTHO05D010063 1.5e-86 322.8 159 100.0
Migut.I01137 Erythranthe guttata HOM05D008031 ORTHO05D010063 3.6e-32 142.1 169 50.9
GSVIVG01016662001 Vitis vinifera HOM05D008031 ORTHO05D010063 4.1e-28 128.6 167 45.5
Cc04_g00650 Coffea canephora HOM05D008031 ORTHO05D010063 1.7e-26 123.2 169 43.2
Actinidia21841 Actinidia chinensis HOM05D008031 ORTHO05D010063 2.3e-26 122.9 170 44.7
Peaxi162Scf00038g02327 Petunia axillaris HOM05D008031 ORTHO05D010063 3.0e-26 122.5 170 44.1
Manes.04G151400 Manihot esculenta HOM05D008031 ORTHO05D010063 1.1e-25 120.6 165 41.2
Oeu019510.1 Olea europaea HOM05D008031 ORTHO05D010063 1.5e-25 120.2 166 44.6
Atru.chr1.4161 Acer truncatum HOM05D008031 ORTHO05D010063 7.3e-25 117.9 168 42.9
Potri.003G073200 Populus trichocarpa HOM05D008031 ORTHO05D010063 7.3e-25 117.9 166 41.6
Solyc03g123670.3 Solanum lycopersicum HOM05D008031 ORTHO05D010063 9.6e-25 117.5 171 43.9
Sopen03g041440 Solanum pennellii HOM05D008031 ORTHO05D010063 1.2e-24 117.1 171 43.3
Atru.chr1.4165 Acer truncatum HOM05D008031 ORTHO05D010063 2.8e-24 115.9 169 43.8
Ciclev10027015m.g Citrus clementina HOM05D008031 ORTHO05D010063 6.2e-24 114.8 202 36.1
Oeu053417.1 Olea europaea HOM05D008031 ORTHO05D010063 8.1e-24 114.4 168 42.9
PGSC0003DMG400009151 Solanum tuberosum HOM05D008031 ORTHO05D010063 8.1e-24 114.4 171 43.3
Thecc.06G130800 Theobroma cacao HOM05D008031 ORTHO05D010063 3.1e-23 112.5 167 40.7
CiPaw.01G211000 Carya illinoinensis HOM05D008031 ORTHO05D010063 4.0e-23 112.1 169 42.6
Potri.001G162100 Populus trichocarpa HOM05D008031 ORTHO05D010063 4.0e-23 112.1 166 39.8
Actinidia24421 Actinidia chinensis HOM05D001728 ORTHO05D004321 8.9e-23 110.9 170 42.9
Hma1.2p1_0090F.1_g045750 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 8.9e-23 110.9 169 42.0
Hma1.2p1_2628F.1_g325675 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 8.9e-23 110.9 169 42.0
CSS0025062 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004321 1.2e-22 110.5 166 42.8
Gohir.D10G051032 Gossypium hirsutum HOM05D001728 ORTHO05D004321 1.2e-22 110.5 167 41.3
CiPaw.02G130600 Carya illinoinensis HOM05D008031 ORTHO05D010063 1.5e-22 110.2 170 41.2
Gorai.011G054900 Gossypium raimondii HOM05D001728 ORTHO05D004321 1.5e-22 110.2 167 41.3
Gohir.A10G048037 Gossypium hirsutum HOM05D001728 ORTHO05D004321 5.8e-22 108.2 167 40.7
Nitab4.5_0006966g0010 Nicotiana tabacum HOM05D008031 ORTHO05D010063 1.7e-21 106.7 170 42.9
Haze_16140 Corylus avellana HOM05D001728 ORTHO05D004321 4.9e-21 105.1 166 39.2
FvH4_6g35970 Fragaria vesca HOM05D008031 ORTHO05D010063 6.4e-21 104.8 164 44.5
FAN09G4453 Fragaria x ananassa HOM05D008031 ORTHO05D010063 6.4e-21 104.8 164 44.5
FAN14G4753 Fragaria x ananassa HOM05D008031 ORTHO05D010063 6.4e-21 104.8 164 44.5
Prupe.3G030600 Prunus persica HOM05D008031 ORTHO05D010063 6.4e-21 104.8 166 45.2
COL.COLO4_30875 Corchorus olitorius HOM05D008031 ORTHO05D010063 8.4e-21 104.4 166 39.2
Nitab4.5_0006338g0010 Nicotiana tabacum HOM05D008031 ORTHO05D010063 8.4e-21 104.4 170 40.0
QL05p000882 Quercus lobata HOM05D008031 ORTHO05D010063 8.4e-21 104.4 166 39.8
QL05p001111 Quercus lobata HOM05D008031 ORTHO05D010063 8.4e-21 104.4 166 39.8
RcHm_v2.0_Chr2g0148091 Rosa chinensis HOM05D008031 ORTHO05D010063 1.9e-20 103.2 165 43.6
Rhsim08G0245200 Rhododendron simsii HOM05D008031 ORTHO05D010063 2.4e-20 102.8 168 41.1
FAN05G2192 Fragaria x ananassa HOM05D008031 ORTHO05D010063 4.2e-20 102.1 164 43.3
MBI19_g32875_MAGBIO Magnolia biondii HOM05D008031 ORTHO05D010063 7.1e-20 101.3 169 40.2
CsaV3_3G031060 Cucumis sativus L. HOM05D008031 ORTHO05D010063 9.3e-20 100.9 164 39.6
TWI14G1127 Tripterygium wilfordii HOM05D008031 ORTHO05D010063 9.3e-20 100.9 167 38.9
Glyma.07G046300 Glycine max HOM05D008031 ORTHO05D010063 1.2e-19 100.5 169 40.2
FAN02G3240 Fragaria x ananassa HOM05D008031 ORTHO05D010063 2.7e-19 99.4 166 42.2
TAR626G1534 Trochodendron aralioides HOM05D008031 ORTHO05D010063 2.7e-19 99.4 167 39.5
Medtr8g023390 Medicago truncatula HOM05D008031 ORTHO05D010063 6.0e-19 98.2 163 41.1
MELO3C022708.2 Cucumis melo HOM05D008031 ORTHO05D010063 1.3e-18 97.1 157 39.5
Lj3g0013752 Lotus japonicus HOM05D008031 ORTHO05D010063 6.6e-18 94.7 168 37.5
PGR102G3014 Punica granatum HOM05D008031 ORTHO05D010063 6.6e-18 94.7 166 39.2
MSTRG.9544 Avicennia marina HOM05D008031 ORTHO05D010063 8.7e-18 94.4 142 47.2
SalBow6G0345 Salvia bowleyana HOM05D008031 ORTHO05D010063 1.1e-17 94.0 153 39.9
ClCG07G014260 Citrullus lanatus HOM05D008031 ORTHO05D010063 1.9e-17 93.2 163 37.4
Sed0024761 Sechium edule HOM05D008031 ORTHO05D010063 5.6e-17 91.7 164 38.4
MD17G1154700 Malus domestica HOM05D008031 ORTHO05D010063 7.3e-17 91.3 147 44.2
Eucgr.J02592 Eucalyptus grandis HOM05D008031 ORTHO05D010063 9.6e-17 90.9 169 38.5
MD09G1172200 Malus domestica HOM05D008031 ORTHO05D010063 9.6e-17 90.9 147 42.9
Phvul.010G122700 Phaseolus vulgaris HOM05D008031 ORTHO05D010063 9.6e-17 90.9 171 39.2
Cpa.g.sc25.199 Carica papaya HOM05D008031 ORTHO05D010063 1.3e-16 90.5 163 38.0
Ah.08g217400 Amaranthus hybridus HOM05D008031 ORTHO05D010063 1.6e-16 90.1 170 36.5
Duzib235G0155 Durio zibethinus HOM05D008031 ORTHO05D010063 1.6e-16 90.1 139 40.3
VMungo0331G1222 Vigna mungo HOM05D008031 ORTHO05D010063 2.1e-16 89.7 171 38.6
Oeu015468.1 Olea europaea HOM05D008031 ORTHO05D010063 2.8e-16 89.4 162 36.4
TPR.G29474 Trifolium pratense HOM05D008031 ORTHO05D010063 3.6e-16 89.0 173 38.2
Aqoxy7G04192 Aquilegia oxysepala HOM05D008031 ORTHO05D010063 4.8e-16 88.6 174 39.1
CANSAT56G3277 Cannabis sativa HOM05D008031 ORTHO05D010063 4.0e-15 85.5 167 34.7
Lsat_1_v5_gn_4_90600 Lactuca sativa HOM05D008031 ORTHO05D010063 9.0e-15 84.3 149 38.3
Lalb_Chr10g0101091 Lupinus albus HOM05D008031 ORTHO05D010063 9.0e-15 84.3 171 38.0
Cfa003457 Carpinus fangiana HOM05D008031 ORTHO05D010063 2.0e-14 83.2 170 35.3
Dinv20378 Davidia involucrata HOM05D001728 ORTHO05D004321 1.3e-13 80.5 162 33.3
arahy.Tifrunner.gnm1.ann1.PVL51W Arachis hypogaea HOM05D008031 ORTHO05D010063 3.8e-13 79.0 156 37.8
DCAR_022641 Daucus carota HOM05D008031 ORTHO05D010063 3.8e-13 79.0 157 40.1
Hund18631 Selenicereus undatus HOM05D008031 ORTHO05D010063 4.9e-13 78.6 155 41.3
arahy.Tifrunner.gnm1.ann1.8JA41T Arachis hypogaea HOM05D008031 ORTHO05D010063 1.4e-12 77.0 159 38.4
arahy.Tifrunner.gnm1.ann1.CKB8X1 Arachis hypogaea HOM05D008031 ORTHO05D010063 1.9e-12 76.6 159 38.4
Glyma.16G014500 Glycine max HOM05D008031 ORTHO05D010063 5.1e-10 68.6 168 33.9
MBI18_g04556_MAGBIO Magnolia biondii HOM05D005099 ORTHO05D006087 1.6e-08 63.5 171 31.0
ATR0693G064 Amborella trichopoda HOM05D005099 ORTHO05D006087 2.8e-08 62.8 168 32.1
Potri.008G219500 Populus trichocarpa HOM05D005099 ORTHO05D006087 3.6e-08 62.4 194 30.9
Thecc.04G288600 Theobroma cacao HOM05D005099 ORTHO05D006087 3.6e-08 62.4 193 29.5
Duzib212G0134 Durio zibethinus HOM05D005099 ORTHO05D006087 1.1e-07 60.8 185 31.9
SEGI_30103 Sequoiadendron giganteum HOM05D036824 ORTHO05D010063 3.1e-07 59.3 167 34.1
SEGI_39614 Sequoiadendron giganteum HOM05D036824 ORTHO05D010063 3.1e-07 59.3 167 34.1
TAR365G0602 Trochodendron aralioides HOM05D005099 ORTHO05D006087 4.0e-07 58.9 194 30.4
Cfa015424 Carpinus fangiana HOM05D005099 ORTHO05D006087 5.3e-07 58.5 187 29.9
HPP92_016651 Vanilla planifolia HOM05D042795 ORTHO05D010063 1.2e-06 57.4 147 36.7
Sabra08G0151700 Salix brachista HOM05D005099 ORTHO05D006087 1.5e-06 57.0 192 30.7
Haze_01169 Corylus avellana HOM05D005099 ORTHO05D006087 2.0e-06 56.6 180 32.2
CDE05G1539 Ceratophyllum demersum HOM05D008031 ORTHO05D010063 2.6e-06 56.2 173 27.7
Nitab4.5_0000695g0110 Nicotiana tabacum HOM05D005099 ORTHO05D006087 3.4e-06 55.8 190 30.0
THA.LOC104827334 Tarenaya hassleriana HOM05D005099 ORTHO05D006087 3.4e-06 55.8 193 29.0
CSS0011820 Camellia sinensis var. sinensis HOM05D005099 ORTHO05D006087 4.5e-06 55.5 176 30.7
TAR362G0212 Trochodendron aralioides HOM05D005099 ORTHO05D006087 4.5e-06 55.5 184 32.1
Manes.15G010800 Manihot esculenta HOM05D005099 ORTHO05D006087 5.8e-06 55.1 178 28.7
Nn3g21536 Nelumbo nucifera HOM05D005099 ORTHO05D006087 5.8e-06 55.1 180 27.8
CAN.G14.36 Capsicum annuum HOM05D005099 ORTHO05D006087 7.6e-06 54.7 192 27.6
Ciclev10006010m.g Citrus clementina HOM05D005099 ORTHO05D006087 7.6e-06 54.7 186 28.5


User provided reference genes

Program Settings