Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold71G23927 Striga asiatica HOM05D000215 ORTHO05D002282 4.8e-61 237.7 121 100.0
SGA_v2.0_scaffold83G26369 Striga asiatica HOM05D000134 ORTHO05D002282 9.8e-22 107.1 95 66.3
MSTRG.8175 Avicennia marina HOM05D000215 ORTHO05D002282 2.1e-11 72.8 95 43.2
Nitab4.5_0004201g0030 Nicotiana tabacum HOM05D000215 ORTHO05D002282 1.6e-08 63.2 94 43.6
SalBow3G0401 Salvia bowleyana HOM05D000215 ORTHO05D002282 1.6e-08 63.2 90 43.3
Manes.08G146901 Manihot esculenta HOM05D000215 ORTHO05D002282 6.2e-08 61.2 84 46.4
Dinv04102 Davidia involucrata HOM05D000215 ORTHO05D002282 8.1e-08 60.8 85 42.4
Nitab4.5_0000504g0040 Nicotiana tabacum HOM05D000215 ORTHO05D002282 8.1e-08 60.8 94 43.6
SalBow3G1959 Salvia bowleyana HOM05D000215 ORTHO05D002282 8.1e-08 60.8 90 42.2
RcHm_v2.0_Chr3g0448811 Rosa chinensis HOM05D000215 ORTHO05D002282 1.1e-07 60.5 86 40.7
Peaxi162Scf00071g10138 Petunia axillaris HOM05D000215 ORTHO05D002282 1.4e-07 60.1 86 44.2
Migut.F01819 Erythranthe guttata HOM05D000215 ORTHO05D002282 1.8e-07 59.7 71 49.3
Cfa006302 Carpinus fangiana HOM05D000215 ORTHO05D002282 3.1e-07 58.9 89 43.8
Haze_04488 Corylus avellana HOM05D000215 ORTHO05D002282 3.1e-07 58.9 89 43.8
MSTRG.20988 Avicennia marina HOM05D000215 ORTHO05D002282 4.0e-07 58.5 96 40.6
Manes.08G147000 Manihot esculenta HOM05D000215 ORTHO05D002282 4.0e-07 58.5 84 45.2
FAN09G3198 Fragaria x ananassa HOM05D000215 ORTHO05D002282 5.2e-07 58.2 83 39.8
Potri.019G029500 Populus trichocarpa HOM05D000215 ORTHO05D002282 8.9e-07 57.4 85 41.2
QL09p048947 Quercus lobata HOM05D000215 ORTHO05D002282 1.2e-06 57.0 87 40.2
Ca_07492_v3 Cicer arietinum L. HOM05D000215 ORTHO05D002282 1.5e-06 56.6 96 36.5
FvH4_6g01250 Fragaria vesca HOM05D000215 ORTHO05D002282 1.5e-06 56.6 83 38.6
FAN02G1793 Fragaria x ananassa HOM05D000215 ORTHO05D002282 1.5e-06 56.6 83 38.6
FAN05G3131 Fragaria x ananassa HOM05D000215 ORTHO05D002282 1.5e-06 56.6 83 38.6
FAN05G5207 Fragaria x ananassa HOM05D000215 ORTHO05D002282 1.5e-06 56.6 83 38.6
Oeu025055.1 Olea europaea HOM05D000215 ORTHO05D002282 1.5e-06 56.6 96 41.7
Dinv28827 Davidia involucrata HOM05D000215 ORTHO05D002282 2.0e-06 56.2 87 39.1
Manes.08G146800 Manihot esculenta HOM05D000215 ORTHO05D002282 2.0e-06 56.2 84 44.0
Prupe.6G355500 Prunus persica HOM05D000215 ORTHO05D002282 2.0e-06 56.2 92 37.0
Sabra19G0036200 Salix brachista HOM05D000215 ORTHO05D002282 2.0e-06 56.2 86 40.7
Sabra19G0039300 Salix brachista HOM05D000215 ORTHO05D002282 2.0e-06 56.2 86 40.7
Aqoxy2G03967 Aquilegia oxysepala HOM05D000215 ORTHO05D002282 3.4e-06 55.5 76 40.8
MSTRG.18818 Avicennia marina HOM05D000215 ORTHO05D002282 3.4e-06 55.5 96 40.6
Cpa.g.sc8.97 Carica papaya HOM05D000215 ORTHO05D002282 3.4e-06 55.5 83 39.8
Migut.D02456 Erythranthe guttata HOM05D000215 ORTHO05D002282 3.4e-06 55.5 94 42.6
Hma1.2p1_0781F.1_g216830 Hydrangea macrophylla HOM05D000215 ORTHO05D002282 3.4e-06 55.5 88 39.8
DCAR_012687 Daucus carota HOM05D000215 ORTHO05D002282 4.4e-06 55.1 105 39.0
Psat3g150640 Pisum sativum HOM05D000215 ORTHO05D002282 4.4e-06 55.1 91 40.7
QL01p047315 Quercus lobata HOM05D000215 ORTHO05D002282 4.4e-06 55.1 91 40.7
Dinv22996 Davidia involucrata HOM05D000215 ORTHO05D002282 5.8e-06 54.7 87 40.2
TPR.G26839 Trifolium pratense HOM05D000215 ORTHO05D002282 5.8e-06 54.7 91 38.5
Ciclev10031496m.g Citrus clementina HOM05D000215 ORTHO05D002282 7.6e-06 54.3 83 42.2
Manes.12G051300 Manihot esculenta HOM05D000215 ORTHO05D002282 7.6e-06 54.3 83 42.2
GSVIVG01007275001 Vitis vinifera HOM05D000215 ORTHO05D002282 7.6e-06 54.3 84 36.9
SHI10321 Sapria himalayana HOM05D000215 ORTHO05D002282 9.9e-06 53.9 89 39.3
vmacro14708 Vaccinium macrocarpon HOM05D000215 ORTHO05D002282 9.9e-06 53.9 85 40.0


User provided reference genes

Program Settings