Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold71G23926 Striga asiatica HOM05D009637 ORTHO05D012223 1.4e-81 306.2 153 100.0
SGA_v2.0_scaffold1G00352 Striga asiatica HOM05D009637 ORTHO05D012223 5.2e-20 101.7 116 55.2
Os07g0675133 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 5.4e-17 91.7 114 51.8
MELO3C030878.2 Cucumis melo HOM05D009637 ORTHO05D012223 7.1e-17 91.3 98 53.1
Os01g0312600 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 1.2e-16 90.5 123 48.0
Os01g0788451 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 1.1e-12 77.4 116 44.0
Os02g0783050 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 2.3e-12 76.3 94 51.1
unitig_51.g30985 Utricularia gibba HOM05D009637 ORTHO05D012223 2.0e-11 73.2 93 50.5
SGA_v2.0_scaffold80G25886 Striga asiatica HOM05D009637 ORTHO05D012223 3.4e-11 72.4 124 39.5
Zm00001eb014040 Zea mays HOM05D009637 ORTHO05D012223 5.8e-11 71.6 114 44.7
Os01g0254350 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 2.9e-10 69.3 109 45.0
Os01g0234433 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 4.9e-10 68.6 116 41.4
FAN27G0990 Fragaria x ananassa HOM05D009637 ORTHO05D012223 8.4e-10 67.8 85 48.2
Os09g0545550 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 1.4e-09 67.0 120 36.7
Os01g0880350 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 1.7e-07 60.1 124 38.7
Os04g0641250 Oryza sativa ssp. japonica HOM05D009637 ORTHO05D012223 3.9e-07 58.9 119 40.3
Sc08g0009140 Simmondsia chinensis HOM05D009637 ORTHO05D012223 4.3e-06 55.5 80 47.5
SGA_v2.0_scaffold71G23923 Striga asiatica HOM05D009637 ORTHO05D012223 5.6e-06 55.1 79 45.6


User provided reference genes

Program Settings