Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold71G23917 Striga asiatica HOM05D012249 ORTHO05D014194 2.7e-110 402.1 218 100.0
SalBow5G4205 Salvia bowleyana HOM05D012249 ORTHO05D014194 1.3e-32 144.1 182 47.3
SGA_v2.0_scaffold122G33311 Striga asiatica HOM05D012249 ORTHO05D014194 2.2e-32 143.3 149 55.0
SalBow3G2935 Salvia bowleyana HOM05D012249 ORTHO05D014194 3.2e-31 139.4 196 41.8
Migut.F00867 Erythranthe guttata HOM05D012249 ORTHO05D014194 5.5e-31 138.7 226 38.1
Migut.F00864 Erythranthe guttata HOM05D012249 ORTHO05D014194 1.2e-30 137.5 223 38.1
Oeu037519.1 Olea europaea HOM05D012249 ORTHO05D014194 1.2e-22 110.9 198 36.4
SalBow5G4839 Salvia bowleyana HOM05D012249 ORTHO05D014194 2.0e-20 103.6 141 45.4
Cc02_g08260 Coffea canephora HOM05D012249 ORTHO05D014194 1.7e-11 73.9 174 30.5
Oeu030222.1 Olea europaea HOM05D012249 ORTHO05D014194 2.4e-10 70.1 154 31.8
Actinidia21095 Actinidia chinensis HOM05D030391 ORTHO05D010368 5.3e-10 68.9 150 30.0
Potri.001G326100 Populus trichocarpa HOM05D014780 ORTHO05D010368 1.6e-09 67.4 73 43.8
unitig_26.g10156 Utricularia gibba HOM05D012249 ORTHO05D014194 4.5e-09 65.9 153 30.1
Sed0006744 Sechium edule HOM05D029525 ORTHO05D010368 7.7e-09 65.1 63 44.4
Oeu001437.1 Olea europaea HOM05D012249 ORTHO05D014194 1.3e-08 64.3 177 29.9
Potri.009G126600 Populus trichocarpa HOM05D014780 ORTHO05D010368 2.9e-08 63.2 72 41.7
Aa31LG1G15860 Aethionema arabicum HOM05D010390 ORTHO05D012282 3.8e-08 62.8 81 34.6
Solyc06g084340.1 Solanum lycopersicum HOM05D015379 ORTHO05D017769 3.8e-08 62.8 197 24.4
THA.LOC104805601 Tarenaya hassleriana HOM05D000520 ORTHO05D000399 5.0e-08 62.4 67 43.3
AL7G29470 Arabidopsis lyrata HOM05D010390 ORTHO05D012282 1.9e-07 60.5 66 39.4
Gohir.A11G263600 Gossypium hirsutum HOM05D000520 ORTHO05D000399 2.5e-07 60.1 76 42.1
Gohir.D11G273800 Gossypium hirsutum HOM05D000520 ORTHO05D000399 3.2e-07 59.7 76 42.1
Gorai.007G295300 Gossypium raimondii HOM05D000520 ORTHO05D000399 3.2e-07 59.7 76 42.1
Sp1g26300 Schrenkiella parvula HOM05D010390 ORTHO05D012282 3.2e-07 59.7 66 37.9
Oeu026610.1 Olea europaea HOM05D012249 ORTHO05D014194 4.2e-07 59.3 66 45.5
BcaB07g32656 Brassica carinata HOM05D010390 ORTHO05D012282 5.5e-07 58.9 63 39.7
Sabra13G0026500 Salix brachista HOM05D000520 ORTHO05D000399 7.2e-07 58.5 82 39.0
Sabra09G0097300 Salix brachista HOM05D000057 ORTHO05D010368 9.4e-07 58.2 93 32.3
Manes.08G122800 Manihot esculenta HOM05D000520 ORTHO05D000399 1.6e-06 57.4 69 42.0
Manes.09G164500 Manihot esculenta HOM05D000520 ORTHO05D000399 1.6e-06 57.4 69 40.6
HPP92_013660 Vanilla planifolia HOM05D000520 ORTHO05D006660 1.6e-06 57.4 68 44.1
HPP92_013678 Vanilla planifolia HOM05D000520 ORTHO05D010009 1.6e-06 57.4 68 44.1
AT4G23882 Arabidopsis thaliana HOM05D010390 ORTHO05D012282 2.1e-06 57.0 66 37.9
Duzib128G1162 Durio zibethinus HOM05D000520 ORTHO05D000399 2.7e-06 56.6 67 43.3
Potri.013G025300 Populus trichocarpa HOM05D000520 ORTHO05D000399 2.7e-06 56.6 66 40.9
Prupe.8G245300 Prunus persica HOM05D019654 ORTHO05D010368 2.7e-06 56.6 105 34.3
Thecc.05G306700 Theobroma cacao HOM05D000520 ORTHO05D000399 2.7e-06 56.6 66 43.9
Potri.004G144200 Populus trichocarpa HOM05D010143 ORTHO05D010368 3.6e-06 56.2 95 31.6
Atru.chr5.1357 Acer truncatum HOM05D000520 ORTHO05D010368 4.7e-06 55.8 118 28.0
TAR362G0969 Trochodendron aralioides HOM05D000520 ORTHO05D000399 4.7e-06 55.8 80 38.8
AL5G45950 Arabidopsis lyrata HOM05D035404 ORTHO05D023685 6.1e-06 55.5 71 36.6
Carub.0001s2868 Capsella rubella HOM05D010390 ORTHO05D012282 6.1e-06 55.5 118 27.1
Prupe.7G246000 Prunus persica HOM05D019654 ORTHO05D010368 6.1e-06 55.5 97 34.0
QL12p022735 Quercus lobata HOM05D010143 ORTHO05D010368 6.1e-06 55.5 63 38.1
Duzib138G0353 Durio zibethinus HOM05D016083 ORTHO05D010368 8.0e-06 55.1 66 40.9
Duzib177G0455 Durio zibethinus HOM05D000520 ORTHO05D000399 8.0e-06 55.1 91 36.3
Manes.03G184400 Manihot esculenta HOM05D000520 ORTHO05D000399 8.0e-06 55.1 80 38.8
Thecc.03G139400 Theobroma cacao HOM05D014780 ORTHO05D010368 8.0e-06 55.1 73 37.0


User provided reference genes

Program Settings