Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold71G23911 Striga asiatica HOM05D003357 ORTHO05D003779 9.5e-116 420.2 219 100.0
Migut.I01123 Erythranthe guttata HOM05D003357 ORTHO05D003779 1.8e-61 240.0 197 62.9
SalBow2G0668 Salvia bowleyana HOM05D003357 ORTHO05D003779 4.3e-52 208.8 190 60.5
Nitab4.5_0003987g0080 Nicotiana tabacum HOM05D003357 ORTHO05D003779 3.0e-37 159.5 193 45.1
Solyc03g123510.3 Solanum lycopersicum HOM05D003357 ORTHO05D003779 3.9e-37 159.1 191 41.9
Dinv37830 Davidia involucrata HOM05D003357 ORTHO05D003779 7.4e-36 154.8 212 42.0
Oeu013442.1 Olea europaea HOM05D000643 ORTHO05D000663 7.4e-36 154.8 159 52.2
Hma1.2p1_0090F.1_g045910 Hydrangea macrophylla HOM05D003357 ORTHO05D003779 8.2e-35 151.4 177 45.2
Peaxi162Scf00038g02213 Petunia axillaris HOM05D003357 ORTHO05D003779 3.2e-31 139.4 166 44.6
Prupe.3G032500 Prunus persica HOM05D003357 ORTHO05D003779 7.2e-31 138.3 192 41.1
Potri.001G163800 Populus trichocarpa HOM05D003357 ORTHO05D003779 1.0e-29 134.4 189 42.9
MD17G1152300 Malus domestica HOM05D003357 ORTHO05D003779 4.0e-29 132.5 196 44.4
Nitab4.5_0015287g0010 Nicotiana tabacum HOM05D003357 ORTHO05D003779 5.2e-29 132.1 169 42.0
MBI13_g01678_MAGBIO Magnolia biondii HOM05D003357 ORTHO05D003779 6.7e-29 131.7 175 44.0
CAN.G790.70 Capsicum annuum HOM05D003357 ORTHO05D003779 8.8e-29 131.3 167 43.1
Duzib235G0273 Durio zibethinus HOM05D003357 ORTHO05D003779 1.5e-28 130.6 191 37.7
RcHm_v2.0_Chr2g0147641 Rosa chinensis HOM05D003357 ORTHO05D003779 4.4e-28 129.0 186 40.3
Sabra01G0129000 Salix brachista HOM05D003357 ORTHO05D003779 4.4e-28 129.0 203 35.5
Gohir.A05G141100 Gossypium hirsutum HOM05D003357 ORTHO05D003779 9.7e-28 127.9 187 36.4
Gohir.D05G143300 Gossypium hirsutum HOM05D003357 ORTHO05D003779 3.7e-27 125.9 187 35.8
Gorai.009G147200 Gossypium raimondii HOM05D003357 ORTHO05D003779 6.3e-27 125.2 187 35.8
QL05p001541 Quercus lobata HOM05D003357 ORTHO05D003779 1.8e-26 123.6 175 40.0
QL05p001815 Quercus lobata HOM05D003357 ORTHO05D003779 1.8e-26 123.6 175 40.0
CiPaw.02G132100 Carya illinoinensis HOM05D003357 ORTHO05D003779 2.4e-26 123.2 167 39.5
CANSAT56G4096 Cannabis sativa HOM05D003357 ORTHO05D003779 9.1e-26 121.3 195 37.9
Ciclev10026388m.g Citrus clementina HOM05D003357 ORTHO05D003779 4.5e-25 119.0 186 33.3
Sc15g0000760 Simmondsia chinensis HOM05D003357 ORTHO05D003779 1.0e-24 117.9 180 35.6
FvH4_6g35660 Fragaria vesca HOM05D003357 ORTHO05D003779 2.2e-24 116.7 158 39.2
DCAR_016095 Daucus carota HOM05D003357 ORTHO05D003779 1.5e-23 114.0 191 33.5
Atru.chr1.4118 Acer truncatum HOM05D003357 ORTHO05D003779 1.9e-23 113.6 204 36.8
COL.COLO4_30848 Corchorus olitorius HOM05D003357 ORTHO05D003779 1.9e-23 113.6 162 38.3
FAN05G0423 Fragaria x ananassa HOM05D003357 ORTHO05D003779 3.2e-23 112.8 186 37.6
Lsat_1_v5_gn_0_41661 Lactuca sativa HOM05D003357 ORTHO05D003779 2.3e-21 106.7 185 34.1
Manes.04G150000 Manihot esculenta HOM05D003357 ORTHO05D003779 3.0e-21 106.3 172 34.3
SEGI_11822 Sequoiadendron giganteum HOM05D003357 ORTHO05D003779 1.7e-19 100.5 183 31.1
ATR0317G009 Amborella trichopoda HOM05D003357 ORTHO05D003779 1.2e-17 94.4 175 34.3
HanXRQChr15g0497241 Helianthus annuus HOM05D003357 ORTHO05D003779 1.6e-17 94.0 144 35.4
MBI06_g01047_MAGBIO Magnolia biondii HOM05D003357 ORTHO05D003779 1.3e-16 90.9 154 30.5
CDE06G2726 Ceratophyllum demersum HOM05D003357 ORTHO05D003779 1.9e-15 87.0 168 31.5
CDE06G1413 Ceratophyllum demersum HOM05D003357 ORTHO05D003779 3.2e-15 86.3 189 31.7
Sopen03g041280 Solanum pennellii HOM05D003357 ORTHO05D003779 2.8e-14 83.2 103 37.9
SEGI_24152 Sequoiadendron giganteum HOM05D003357 ORTHO05D003779 4.7e-14 82.4 146 30.1
CsaV3_7G034060 Cucumis sativus L. HOM05D003357 ORTHO05D003779 6.1e-14 82.0 189 28.0
SMO164G0048 Selaginella moellendorffii HOM05D003357 ORTHO05D003779 6.1e-14 82.0 172 27.3
HanXRQChr10g0300241 Helianthus annuus HOM05D003357 ORTHO05D003779 8.0e-14 81.6 167 28.1
Sed0022278 Sechium edule HOM05D003357 ORTHO05D003779 1.8e-13 80.5 186 29.0
Lj9A312T45 Lonicera japonica HOM05D003357 ORTHO05D003779 2.3e-13 80.1 165 30.9
MELO3C024316.2 Cucumis melo HOM05D003357 ORTHO05D003779 8.8e-13 78.2 186 28.5
PSO017G4220 Papaver somniferum HOM05D003357 ORTHO05D003779 8.8e-13 78.2 163 28.2
Sc02g0001800 Simmondsia chinensis HOM05D003357 ORTHO05D003779 8.8e-13 78.2 166 30.1
AagrBONN_evm.TU.Sc2ySwM_228.3124 Anthoceros agrestis HOM05D003357 ORTHO05D003779 1.2e-12 77.8 193 28.0
Lsat_1_v5_gn_5_107641 Lactuca sativa HOM05D003357 ORTHO05D003779 1.5e-12 77.4 163 27.0
unitig_749.g13510 Utricularia gibba HOM05D000349 ORTHO05D003779 1.5e-12 77.4 151 29.1
Peaxi162Scf00003g03752 Petunia axillaris HOM05D003357 ORTHO05D003779 3.4e-12 76.3 153 29.4
Nitab4.5_0003615g0040 Nicotiana tabacum HOM05D003357 ORTHO05D003779 5.7e-12 75.5 154 29.9
TAR197G0001 Trochodendron aralioides HOM05D003357 ORTHO05D003779 5.7e-12 75.5 158 28.5
Dinv24254 Davidia involucrata HOM05D003357 ORTHO05D003779 7.5e-12 75.1 158 30.4
HanXRQChr16g0514191 Helianthus annuus HOM05D003357 ORTHO05D003779 7.5e-12 75.1 170 27.6
Nitab4.5_0003071g0080 Nicotiana tabacum HOM05D003357 ORTHO05D003779 7.5e-12 75.1 160 28.8
Migut.N01027 Erythranthe guttata HOM05D003357 ORTHO05D003779 9.8e-12 74.7 154 30.5
Atru.chr6.1007 Acer truncatum HOM05D003357 ORTHO05D003779 1.3e-11 74.3 171 27.5
Os03g0262700 Oryza sativa ssp. japonica HOM05D003357 ORTHO05D003779 1.7e-11 73.9 167 29.3
VMungo0540G1809 Vigna mungo HOM05D003357 ORTHO05D003779 1.7e-11 73.9 161 28.6
arahy.Tifrunner.gnm1.ann1.11V3F3 Arachis hypogaea HOM05D003357 ORTHO05D003779 2.2e-11 73.6 158 29.1
arahy.Tifrunner.gnm1.ann1.I2CYKQ Arachis hypogaea HOM05D003357 ORTHO05D003779 2.2e-11 73.6 158 29.1
MELO3C012699.2 Cucumis melo HOM05D003357 ORTHO05D003779 2.2e-11 73.6 157 29.3
PSO421G0588 Papaver somniferum HOM05D003357 ORTHO05D003779 2.2e-11 73.6 119 35.3
Peaxi162Scf00011g00031 Petunia axillaris HOM05D003357 ORTHO05D003779 2.2e-11 73.6 161 29.2
Phvul.006G211600 Phaseolus vulgaris HOM05D003357 ORTHO05D003779 2.2e-11 73.6 161 28.6
ATR0121G007 Amborella trichopoda HOM05D003357 ORTHO05D003779 3.7e-11 72.8 170 25.3
Ca_29933_v3 Cicer arietinum L. HOM05D003357 ORTHO05D003779 3.7e-11 72.8 161 27.3
ClCG00G003530 Citrullus lanatus HOM05D003357 ORTHO05D003779 3.7e-11 72.8 157 29.3
ClCG09G014530 Citrullus lanatus HOM05D003357 ORTHO05D003779 3.7e-11 72.8 157 29.3
Lsat_1_v5_gn_7_78341 Lactuca sativa HOM05D003357 ORTHO05D003779 3.7e-11 72.8 149 27.5
Lalb_Chr20g0123351 Lupinus albus HOM05D003357 ORTHO05D003779 3.7e-11 72.8 167 26.3
Sed0004213 Sechium edule HOM05D003357 ORTHO05D003779 3.7e-11 72.8 171 28.7
HPP92_011155 Vanilla planifolia HOM05D003357 ORTHO05D003779 3.7e-11 72.8 167 26.9
CsaV3_7G022210 Cucumis sativus L. HOM05D003357 ORTHO05D003779 4.9e-11 72.4 154 28.6
Nitab4.5_0009907g0030 Nicotiana tabacum HOM05D003357 ORTHO05D003779 4.9e-11 72.4 155 28.4
TPR.G19716 Trifolium pratense HOM05D003357 ORTHO05D003779 4.9e-11 72.4 155 27.7
Zm00001eb011530 Zea mays HOM05D003357 ORTHO05D003779 4.9e-11 72.4 156 28.8
MSTRG.16542 Avicennia marina HOM05D003357 ORTHO05D003779 6.3e-11 72.0 154 27.9
Glyma.08G184000 Glycine max HOM05D003357 ORTHO05D003779 6.3e-11 72.0 154 28.6
Glyma.15G048800 Glycine max HOM05D003357 ORTHO05D003779 6.3e-11 72.0 151 28.5
TWI23G0276 Tripterygium wilfordii HOM05D003357 ORTHO05D003779 8.3e-11 71.6 171 26.9
CAN.G1352.13 Capsicum annuum HOM05D003357 ORTHO05D003779 1.1e-10 71.2 155 28.4
Sed0024772 Sechium edule HOM05D003357 ORTHO05D003779 1.1e-10 71.2 157 28.0
Solyc01g104580.3 Solanum lycopersicum HOM05D003357 ORTHO05D003779 1.1e-10 71.2 156 28.2
Sopen01g047090 Solanum pennellii HOM05D003357 ORTHO05D003779 1.1e-10 71.2 156 28.2
PGSC0003DMG400029777 Solanum tuberosum HOM05D003357 ORTHO05D003779 1.1e-10 71.2 156 28.2
CSS0046968 Camellia sinensis var. sinensis HOM05D003357 ORTHO05D003779 1.8e-10 70.5 153 29.4
Ciclev10002130m.g Citrus clementina HOM05D003357 ORTHO05D003779 1.8e-10 70.5 167 28.1
Nn5g27960 Nelumbo nucifera HOM05D003357 ORTHO05D003779 1.8e-10 70.5 144 31.9
Gohir.D01G000900 Gossypium hirsutum HOM05D003357 ORTHO05D003779 2.4e-10 70.1 178 28.1
Hma1.2p1_0704F.1_g206850 Hydrangea macrophylla HOM05D003357 ORTHO05D003779 2.4e-10 70.1 159 29.6
CiPaw.06G149700 Carya illinoinensis HOM05D003357 ORTHO05D003779 3.1e-10 69.7 164 28.0
DCAR_021821 Daucus carota HOM05D003357 ORTHO05D003779 3.1e-10 69.7 151 27.8
HanXRQChr11g0337561 Helianthus annuus HOM05D003357 ORTHO05D003779 3.1e-10 69.7 150 28.0
Actinidia39063 Actinidia chinensis HOM05D003357 ORTHO05D003779 4.1e-10 69.3 182 29.1
Cpa.g.sc2.31 Carica papaya HOM05D003357 ORTHO05D003779 4.1e-10 69.3 164 26.8
Cfa005555 Carpinus fangiana HOM05D003357 ORTHO05D003779 4.1e-10 69.3 164 27.4
Lj6g0024688 Lotus japonicus HOM05D003357 ORTHO05D003779 4.1e-10 69.3 152 27.0
ClCG05G009890 Citrullus lanatus HOM05D003357 ORTHO05D003779 5.4e-10 68.9 171 26.9
Gohir.A01G001200 Gossypium hirsutum HOM05D003357 ORTHO05D003779 5.4e-10 68.9 178 25.8
Gorai.002G001400 Gossypium raimondii HOM05D003357 ORTHO05D003779 5.4e-10 68.9 178 25.8
PSO170G2411 Papaver somniferum HOM05D003357 ORTHO05D003779 5.4e-10 68.9 157 29.3
TWI14G1244 Tripterygium wilfordii HOM05D003357 ORTHO05D003779 5.4e-10 68.9 164 26.8
Gohir.A03G210600 Gossypium hirsutum HOM05D003357 ORTHO05D003779 1.2e-09 67.8 165 27.9
Nitab4.5_0000078g0390 Nicotiana tabacum HOM05D003357 ORTHO05D003779 2.0e-09 67.0 147 32.0
SalBow5G0183 Salvia bowleyana HOM05D003357 ORTHO05D003779 2.0e-09 67.0 149 27.5
Medtr2g007830 Medicago truncatula HOM05D003357 ORTHO05D003779 2.7e-09 66.6 158 27.8
Gohir.D02G232200 Gossypium hirsutum HOM05D003357 ORTHO05D003779 3.5e-09 66.2 167 27.5
MD08G1227400 Malus domestica HOM05D003357 ORTHO05D003779 3.5e-09 66.2 163 27.6
Dinv19344 Davidia involucrata HOM05D003357 ORTHO05D003779 4.5e-09 65.9 156 26.9
Gorai.005G260000 Gossypium raimondii HOM05D003357 ORTHO05D003779 4.5e-09 65.9 165 27.3
Lj5C246T11 Lonicera japonica HOM05D003357 ORTHO05D003779 4.5e-09 65.9 144 30.6
Oeu041075.1 Olea europaea HOM05D003357 ORTHO05D003779 4.5e-09 65.9 142 28.9
SGA_v2.0_scaffold110G31275 Striga asiatica HOM05D003357 ORTHO05D003779 4.5e-09 65.9 137 29.9
MSTRG.5244 Avicennia marina HOM05D003357 ORTHO05D003779 5.9e-09 65.5 144 28.5
Duzib052G0578 Durio zibethinus HOM05D003357 ORTHO05D003779 5.9e-09 65.5 176 23.9
Potri.003G021934 Populus trichocarpa HOM05D003357 ORTHO05D003779 5.9e-09 65.5 171 25.1
QL11p019146 Quercus lobata HOM05D003357 ORTHO05D003779 5.9e-09 65.5 163 25.2
Thecc.02G042200 Theobroma cacao HOM05D003357 ORTHO05D003779 7.8e-09 65.1 167 27.5
PGR142G3651 Punica granatum HOM05D003357 ORTHO05D003779 1.0e-08 64.7 170 27.1
CSS0044852 Camellia sinensis var. sinensis HOM05D003357 ORTHO05D003779 1.3e-08 64.3 148 27.7
CsaV3_3G018700 Cucumis sativus L. HOM05D003357 ORTHO05D003779 1.3e-08 64.3 117 29.9
Duzib248G1129 Durio zibethinus HOM05D003357 ORTHO05D003779 1.3e-08 64.3 167 25.1
FAN13G0157 Fragaria x ananassa HOM05D003357 ORTHO05D003779 1.3e-08 64.3 157 26.1
THA.LOC104805045 Tarenaya hassleriana HOM05D003357 ORTHO05D003779 1.3e-08 64.3 169 26.0
unitig_26.g9557 Utricularia gibba HOM05D003357 ORTHO05D003779 1.3e-08 64.3 123 29.3
FAN08G0651 Fragaria x ananassa HOM05D003357 ORTHO05D003779 1.7e-08 63.9 159 27.0
BolC7t43694H Brassica oleracea HOM05D003357 ORTHO05D003779 2.3e-08 63.5 156 27.6
RcHm_v2.0_Chr7g0223311 Rosa chinensis HOM05D003357 ORTHO05D003779 2.3e-08 63.5 129 28.7
arahy.Tifrunner.gnm1.ann1.S31UIX Arachis hypogaea HOM05D003357 ORTHO05D003779 2.9e-08 63.2 169 26.6
FvH4_5g29780 Fragaria vesca HOM05D003357 ORTHO05D003779 2.9e-08 63.2 155 25.8
FAN18G4337 Fragaria x ananassa HOM05D003357 ORTHO05D003779 2.9e-08 63.2 155 25.8
Migut.B00658 Erythranthe guttata HOM05D003357 ORTHO05D003779 3.8e-08 62.8 154 24.7
Eucgr.I02708 Eucalyptus grandis HOM05D003357 ORTHO05D003779 3.8e-08 62.8 171 24.6
SGA_v2.0_scaffold1G00338 Striga asiatica HOM05D003357 ORTHO05D003779 3.8e-08 62.8 163 26.4
BcaC06g34220 Brassica carinata HOM05D003357 ORTHO05D003779 5.0e-08 62.4 157 26.8
A06p44690 Brassica napus HOM05D003357 ORTHO05D003779 5.0e-08 62.4 156 26.9
BraA06t27342Z Brassica rapa HOM05D003357 ORTHO05D003779 5.0e-08 62.4 156 26.9
CANSAT11G1252 Cannabis sativa HOM05D003357 ORTHO05D003779 5.0e-08 62.4 176 25.0
Ca_00094_v3 Cicer arietinum L. HOM05D003357 ORTHO05D003779 5.0e-08 62.4 140 27.9
MD15G1419800 Malus domestica HOM05D003357 ORTHO05D003779 5.0e-08 62.4 174 26.4
AT2G01080 Arabidopsis thaliana HOM05D003357 ORTHO05D003779 8.6e-08 61.6 155 27.7
Carub.0005s0007 Capsella rubella HOM05D003357 ORTHO05D003779 8.6e-08 61.6 154 26.0
ECA234G2199 Erigeron canadensis HOM05D003357 ORTHO05D003779 8.6e-08 61.6 111 27.9
ECA236G2437 Erigeron canadensis HOM05D003357 ORTHO05D003779 8.6e-08 61.6 109 30.3
Psat1g219760 Pisum sativum HOM05D003357 ORTHO05D003779 8.6e-08 61.6 127 28.3
vmacro01792 Vaccinium macrocarpon HOM05D003357 ORTHO05D003779 8.6e-08 61.6 159 28.3
Zm00001eb398130 Zea mays HOM05D003357 ORTHO05D003779 1.1e-07 61.2 146 29.5
AL5G10030 Arabidopsis lyrata HOM05D003357 ORTHO05D003779 1.5e-07 60.8 154 26.0
A02p31650 Brassica napus HOM05D003357 ORTHO05D003779 1.5e-07 60.8 154 26.0
C02p48990 Brassica napus HOM05D003357 ORTHO05D003779 1.5e-07 60.8 154 26.0
BolC2t10993H Brassica oleracea HOM05D003357 ORTHO05D003779 1.5e-07 60.8 154 26.0
BraA02t08168Z Brassica rapa HOM05D003357 ORTHO05D003779 1.5e-07 60.8 154 26.0
Haze_01610 Corylus avellana HOM05D003357 ORTHO05D003779 1.5e-07 60.8 151 27.8
Haze_01612 Corylus avellana HOM05D003357 ORTHO05D003779 1.5e-07 60.8 151 27.8
COL.COLO4_17901 Corchorus olitorius HOM05D005050 ORTHO05D006198 1.9e-07 60.5 158 27.8
Thhalv10001009m.g Eutrema salsugineum HOM05D003357 ORTHO05D003779 1.9e-07 60.5 158 24.7
CARHR143630 Cardamine hirsuta HOM05D003357 ORTHO05D003779 2.5e-07 60.1 149 25.5
CiPaw.05G042100 Carya illinoinensis HOM05D003357 ORTHO05D003779 2.5e-07 60.1 168 25.0
Potri.001G208000 Populus trichocarpa HOM05D003357 ORTHO05D003779 3.3e-07 59.7 169 23.7
Manes.07G012600 Manihot esculenta HOM05D003357 ORTHO05D003779 5.6e-07 58.9 165 24.8
Prupe.1G564500 Prunus persica HOM05D003357 ORTHO05D003779 9.5e-07 58.2 110 29.1
Rhsim11G0132500 Rhododendron simsii HOM05D003357 ORTHO05D003779 2.1e-06 57.0 98 34.7
SalBow5G2536 Salvia bowleyana HOM05D003357 ORTHO05D003779 2.1e-06 57.0 139 27.3
Peaxi162Scf00018g00081 Petunia axillaris HOM05D003357 ORTHO05D003779 3.6e-06 56.2 95 32.6
SHI16610 Sapria himalayana HOM05D003357 ORTHO05D003779 3.6e-06 56.2 159 29.6
ClCG07G013740 Citrullus lanatus HOM05D002137 ORTHO05D002144 8.0e-06 55.1 148 24.3


User provided reference genes

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