Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold71G23850 Striga asiatica HOM05D008318 ORTHO05D010481 2.4e-60 235.3 120 100.0
MSTRG.10951 Avicennia marina HOM05D008318 ORTHO05D010481 1.2e-24 116.7 123 59.3
Haze_16036 Corylus avellana HOM05D008318 ORTHO05D010481 2.3e-23 112.5 120 56.7
Oeu011091.1 Olea europaea HOM05D008318 ORTHO05D010481 8.8e-23 110.5 120 54.2
CAN.G668.44 Capsicum annuum HOM05D008318 ORTHO05D010481 2.0e-22 109.4 121 55.4
Nitab4.5_0007255g0050 Nicotiana tabacum HOM05D008318 ORTHO05D010481 2.6e-22 109.0 121 54.5
Rhsim12G0209900 Rhododendron simsii HOM05D008318 ORTHO05D010481 1.7e-21 106.3 120 51.7
QL05p004216 Quercus lobata HOM05D008318 ORTHO05D010481 4.8e-21 104.8 119 56.3
CiPaw.02G135200 Carya illinoinensis HOM05D008318 ORTHO05D010481 1.1e-20 103.6 120 55.8
Dinv20430 Davidia involucrata HOM05D008318 ORTHO05D010481 1.1e-20 103.6 121 52.9
Glyma.07G039500 Glycine max HOM05D008318 ORTHO05D010481 1.1e-20 103.6 120 51.7
Manes.11G019700 Manihot esculenta HOM05D008318 ORTHO05D010481 1.4e-20 103.2 120 53.3
TAR383G0433 Trochodendron aralioides HOM05D008318 ORTHO05D010481 4.1e-20 101.7 120 53.3
PGSC0003DMG400014028 Solanum tuberosum HOM05D008318 ORTHO05D010481 2.0e-19 99.4 121 52.9
COL.COLO4_30750 Corchorus olitorius HOM05D008318 ORTHO05D010481 2.7e-19 99.0 121 52.1
Potri.001G168400 Populus trichocarpa HOM05D008318 ORTHO05D010481 2.7e-19 99.0 123 52.0
Sabra01G0142200 Salix brachista HOM05D008318 ORTHO05D010481 2.7e-19 99.0 120 52.5
Actinidia27735 Actinidia chinensis HOM05D008318 ORTHO05D010481 3.5e-19 98.6 113 52.2
Sc15g0000380 Simmondsia chinensis HOM05D008318 ORTHO05D010481 3.5e-19 98.6 120 47.5
Thecc.06G121000 Theobroma cacao HOM05D008318 ORTHO05D010481 5.9e-19 97.8 120 52.5
Actinidia26824 Actinidia chinensis HOM05D008318 ORTHO05D010481 1.3e-18 96.7 113 51.3
Oeu000415.1 Olea europaea HOM05D008318 ORTHO05D010481 1.3e-18 96.7 120 52.5
Potri.003G065900 Populus trichocarpa HOM05D008318 ORTHO05D010481 1.7e-18 96.3 123 51.2
Cfa003529 Carpinus fangiana HOM05D008318 ORTHO05D010481 2.2e-18 95.9 121 52.9
Hma1.2p1_0291F.1_g115060 Hydrangea macrophylla HOM05D008318 ORTHO05D010481 2.2e-18 95.9 120 50.0
Nn8g38638 Nelumbo nucifera HOM05D008318 ORTHO05D010481 2.9e-18 95.5 120 47.5
Solyc03g123380.1 Solanum lycopersicum HOM05D008318 ORTHO05D010481 3.8e-18 95.1 121 53.7
Sopen03g041160 Solanum pennellii HOM05D008318 ORTHO05D010481 3.8e-18 95.1 121 52.9
Lj3g0007896 Lotus japonicus HOM05D008318 ORTHO05D010481 5.0e-18 94.7 120 50.0
RcHm_v2.0_Chr2g0145711 Rosa chinensis HOM05D008318 ORTHO05D010481 5.0e-18 94.7 122 50.0
Ciclev10026763m.g Citrus clementina HOM05D008318 ORTHO05D010481 8.5e-18 94.0 127 51.2
Eucgr.J02810 Eucalyptus grandis HOM05D008318 ORTHO05D010481 8.5e-18 94.0 121 51.2
Ah.08g216830 Amaranthus hybridus HOM05D008318 ORTHO05D010481 2.5e-17 92.4 120 45.8
FAN09G4084 Fragaria x ananassa HOM05D008318 ORTHO05D010481 2.5e-17 92.4 122 48.4
Medtr8g020870 Medicago truncatula HOM05D008318 ORTHO05D010481 2.5e-17 92.4 120 45.8
Lsat_1_v5_gn_4_93140 Lactuca sativa HOM05D008318 ORTHO05D010481 3.2e-17 92.0 120 44.2
MD09G1181800 Malus domestica HOM05D008318 ORTHO05D010481 4.2e-17 91.7 122 50.0
FAN14G5086 Fragaria x ananassa HOM05D008318 ORTHO05D010481 1.2e-16 90.1 122 47.5
Aqoxy1G00205 Aquilegia oxysepala HOM05D008318 ORTHO05D010481 2.1e-16 89.4 120 47.5
FvH4_6g34840 Fragaria vesca HOM05D008318 ORTHO05D010481 2.1e-16 89.4 122 47.5
Gohir.D06G150000 Gossypium hirsutum HOM05D008318 ORTHO05D010481 2.7e-16 89.0 120 48.3
VMungo0331G0642 Vigna mungo HOM05D008318 ORTHO05D010481 3.6e-16 88.6 120 45.0
Gorai.010G175100 Gossypium raimondii HOM05D008318 ORTHO05D010481 4.7e-16 88.2 120 47.5
Prupe.3G039900 Prunus persica HOM05D008318 ORTHO05D010481 6.1e-16 87.8 121 48.8
Psat4g174720 Pisum sativum HOM05D008318 ORTHO05D010481 1.0e-15 87.0 120 46.7
TPR.G36619 Trifolium pratense HOM05D008318 ORTHO05D010481 1.0e-15 87.0 120 43.3
Lalb_Chr25g0281471 Lupinus albus HOM05D008318 ORTHO05D010481 1.8e-15 86.3 122 47.5
Ca_23388_v3 Cicer arietinum L. HOM05D008318 ORTHO05D010481 2.3e-15 85.9 120 48.3
Gohir.A06G144300 Gossypium hirsutum HOM05D008318 ORTHO05D010481 2.3e-15 85.9 120 45.8
DCAR_026413 Daucus carota HOM05D008318 ORTHO05D010481 5.2e-15 84.7 124 46.0
Phvul.010G129200 Phaseolus vulgaris HOM05D008318 ORTHO05D010481 1.8e-12 76.3 120 39.2
Actinidia25326 Actinidia chinensis HOM05D008318 ORTHO05D010481 3.1e-12 75.5 98 48.0
Sed0008648 Sechium edule HOM05D008318 ORTHO05D010481 5.4e-12 74.7 120 45.8
Atru.chr1.3996 Acer truncatum HOM05D008318 ORTHO05D010481 1.6e-11 73.2 127 42.5
ClCG07G014110 Citrullus lanatus HOM05D008318 ORTHO05D010481 5.9e-11 71.2 120 43.3
CsaV3_UNG227960 Cucumis sativus L. HOM05D008318 ORTHO05D010481 7.7e-11 70.9 120 45.0
EL10Ac7g16416 Beta vulgaris HOM05D008318 ORTHO05D010481 6.6e-10 67.8 104 44.2
Aa31LG8G1250 Aethionema arabicum HOM05D008318 ORTHO05D010481 8.6e-10 67.4 126 41.3
MELO3C025802.2 Cucumis melo HOM05D008318 ORTHO05D010481 8.6e-10 67.4 120 42.5
Dinv37865 Davidia involucrata HOM05D004222 ORTHO05D004982 8.6e-10 67.4 103 45.6


User provided reference genes

Program Settings